Experiment: Adenine 0.74 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS05610 and A4249_RS05615 are separated by 78 nucleotides A4249_RS05615 and A4249_RS05620 are separated by 18 nucleotides
A4249_RS05610: A4249_RS05610 - deoxyribodipyrimidine photo-lyase, at 1,148,368 to 1,149,825
_RS05610
A4249_RS05615: A4249_RS05615 - 3-deoxy-8-phosphooctulonate synthase, at 1,149,904 to 1,150,815
_RS05615
A4249_RS05620: A4249_RS05620 - D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase, at 1,150,834 to 1,152,288
_RS05620
Position (kb)
1149
1150
1151 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1148.921 kb on + strand, within A4249_RS05610 at 1148.922 kb on - strand, within A4249_RS05610 at 1148.922 kb on - strand, within A4249_RS05610 at 1149.031 kb on + strand, within A4249_RS05610 at 1149.031 kb on + strand, within A4249_RS05610 at 1149.031 kb on + strand, within A4249_RS05610 at 1149.031 kb on + strand, within A4249_RS05610 at 1149.031 kb on + strand, within A4249_RS05610 at 1149.031 kb on + strand, within A4249_RS05610 at 1149.031 kb on + strand, within A4249_RS05610 at 1149.031 kb on + strand, within A4249_RS05610 at 1149.031 kb on + strand, within A4249_RS05610 at 1149.032 kb on - strand, within A4249_RS05610 at 1149.032 kb on - strand, within A4249_RS05610 at 1149.032 kb on - strand, within A4249_RS05610 at 1149.032 kb on - strand, within A4249_RS05610 at 1149.032 kb on - strand, within A4249_RS05610 at 1149.161 kb on + strand, within A4249_RS05610 at 1149.161 kb on + strand, within A4249_RS05610 at 1149.161 kb on + strand, within A4249_RS05610 at 1149.181 kb on + strand, within A4249_RS05610 at 1149.181 kb on + strand, within A4249_RS05610 at 1149.181 kb on + strand, within A4249_RS05610 at 1149.181 kb on + strand, within A4249_RS05610 at 1149.181 kb on + strand, within A4249_RS05610 at 1149.181 kb on + strand, within A4249_RS05610 at 1149.181 kb on + strand, within A4249_RS05610 at 1149.181 kb on + strand, within A4249_RS05610 at 1149.181 kb on + strand, within A4249_RS05610 at 1149.181 kb on + strand, within A4249_RS05610 at 1149.182 kb on - strand, within A4249_RS05610 at 1149.182 kb on - strand, within A4249_RS05610 at 1149.182 kb on - strand, within A4249_RS05610 at 1149.182 kb on - strand, within A4249_RS05610 at 1149.392 kb on + strand, within A4249_RS05610 at 1149.392 kb on + strand, within A4249_RS05610 at 1149.393 kb on - strand, within A4249_RS05610 at 1149.393 kb on - strand, within A4249_RS05610 at 1149.393 kb on - strand, within A4249_RS05610 at 1149.717 kb on + strand at 1149.717 kb on + strand at 1149.718 kb on - strand at 1149.718 kb on - strand at 1149.719 kb on + strand at 1149.719 kb on + strand at 1149.719 kb on + strand at 1149.719 kb on + strand at 1149.720 kb on - strand at 1149.720 kb on - strand at 1149.720 kb on - strand at 1149.720 kb on - strand at 1149.720 kb on - strand at 1149.843 kb on + strand at 1149.844 kb on - strand at 1149.844 kb on - strand at 1149.885 kb on + strand at 1149.885 kb on + strand at 1149.885 kb on + strand at 1149.885 kb on + strand at 1149.886 kb on - strand at 1149.886 kb on - strand at 1149.886 kb on - strand at 1150.822 kb on + strand at 1150.823 kb on - strand at 1150.823 kb on - strand at 1150.930 kb on + strand at 1150.936 kb on + strand at 1150.936 kb on + strand at 1150.936 kb on + strand at 1150.979 kb on + strand at 1150.980 kb on - strand, within A4249_RS05620 at 1151.281 kb on + strand, within A4249_RS05620 at 1151.281 kb on + strand, within A4249_RS05620 at 1151.643 kb on + strand, within A4249_RS05620 at 1151.757 kb on + strand, within A4249_RS05620 at 1151.757 kb on + strand, within A4249_RS05620 at 1151.757 kb on + strand, within A4249_RS05620
Per-strain Table
Position Strand Gene LocusTag Fraction Adenine 0.74 mM (C) remove 1,148,921 + A4249_RS05610 0.38 +0.4 1,148,922 - A4249_RS05610 0.38 -0.2 1,148,922 - A4249_RS05610 0.38 +0.9 1,149,031 + A4249_RS05610 0.45 -0.3 1,149,031 + A4249_RS05610 0.45 +0.5 1,149,031 + A4249_RS05610 0.45 -0.6 1,149,031 + A4249_RS05610 0.45 +0.2 1,149,031 + A4249_RS05610 0.45 -0.4 1,149,031 + A4249_RS05610 0.45 +0.2 1,149,031 + A4249_RS05610 0.45 +0.7 1,149,031 + A4249_RS05610 0.45 -1.0 1,149,031 + A4249_RS05610 0.45 +1.8 1,149,032 - A4249_RS05610 0.46 -0.1 1,149,032 - A4249_RS05610 0.46 +0.6 1,149,032 - A4249_RS05610 0.46 +0.5 1,149,032 - A4249_RS05610 0.46 +0.3 1,149,032 - A4249_RS05610 0.46 +1.3 1,149,161 + A4249_RS05610 0.54 -0.8 1,149,161 + A4249_RS05610 0.54 +0.2 1,149,161 + A4249_RS05610 0.54 +0.0 1,149,181 + A4249_RS05610 0.56 +0.2 1,149,181 + A4249_RS05610 0.56 -0.0 1,149,181 + A4249_RS05610 0.56 -0.3 1,149,181 + A4249_RS05610 0.56 -0.5 1,149,181 + A4249_RS05610 0.56 +0.2 1,149,181 + A4249_RS05610 0.56 -0.2 1,149,181 + A4249_RS05610 0.56 -0.9 1,149,181 + A4249_RS05610 0.56 +0.1 1,149,181 + A4249_RS05610 0.56 -0.7 1,149,181 + A4249_RS05610 0.56 -0.5 1,149,182 - A4249_RS05610 0.56 -0.3 1,149,182 - A4249_RS05610 0.56 -0.4 1,149,182 - A4249_RS05610 0.56 +0.0 1,149,182 - A4249_RS05610 0.56 -0.6 1,149,392 + A4249_RS05610 0.70 +0.6 1,149,392 + A4249_RS05610 0.70 +0.9 1,149,393 - A4249_RS05610 0.70 -1.9 1,149,393 - A4249_RS05610 0.70 -0.1 1,149,393 - A4249_RS05610 0.70 -1.6 1,149,717 + -0.3 1,149,717 + -0.1 1,149,718 - -0.3 1,149,718 - -0.7 1,149,719 + +1.2 1,149,719 + +0.1 1,149,719 + -1.2 1,149,719 + +1.0 1,149,720 - -0.7 1,149,720 - -0.2 1,149,720 - -0.0 1,149,720 - +0.2 1,149,720 - -0.2 1,149,843 + -0.6 1,149,844 - -0.8 1,149,844 - -1.0 1,149,885 + -0.3 1,149,885 + -0.3 1,149,885 + -0.0 1,149,885 + -0.2 1,149,886 - -0.3 1,149,886 - +0.1 1,149,886 - -0.6 1,150,822 + -0.8 1,150,823 - -0.3 1,150,823 - -1.4 1,150,930 + +0.8 1,150,936 + +1.8 1,150,936 + -0.8 1,150,936 + -0.4 1,150,979 + -0.7 1,150,980 - A4249_RS05620 0.10 +0.2 1,151,281 + A4249_RS05620 0.31 -1.3 1,151,281 + A4249_RS05620 0.31 -1.8 1,151,643 + A4249_RS05620 0.56 -1.5 1,151,757 + A4249_RS05620 0.63 -2.4 1,151,757 + A4249_RS05620 0.63 -1.1 1,151,757 + A4249_RS05620 0.63 -1.0
Or see this region's nucleotide sequence