Experiment: Adenine 0.74 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS04630 and A4249_RS04635 are separated by 1 nucleotides A4249_RS04635 and A4249_RS04640 are separated by 768 nucleotides
A4249_RS04630: A4249_RS04630 - aminopeptidase P family protein, at 959,705 to 961,510
_RS04630
A4249_RS04635: A4249_RS04635 - cyclic nucleotide-binding domain-containing protein, at 961,512 to 963,242
_RS04635
A4249_RS04640: A4249_RS04640 - serine--tRNA ligase, at 964,011 to 965,426
_RS04640
Position (kb) 961
962
963
964 Strain fitness (log2 ratio) -2
-1
0
1
2 at 960.557 kb on + strand, within A4249_RS04630 at 960.557 kb on + strand, within A4249_RS04630 at 960.558 kb on - strand, within A4249_RS04630 at 960.670 kb on + strand, within A4249_RS04630 at 960.671 kb on - strand, within A4249_RS04630 at 960.854 kb on + strand, within A4249_RS04630 at 960.854 kb on + strand, within A4249_RS04630 at 960.854 kb on + strand, within A4249_RS04630 at 960.854 kb on + strand, within A4249_RS04630 at 960.854 kb on + strand, within A4249_RS04630 at 960.854 kb on + strand, within A4249_RS04630 at 960.854 kb on + strand, within A4249_RS04630 at 960.854 kb on + strand, within A4249_RS04630 at 960.855 kb on - strand, within A4249_RS04630 at 960.855 kb on - strand, within A4249_RS04630 at 960.855 kb on - strand, within A4249_RS04630 at 960.855 kb on - strand, within A4249_RS04630 at 960.855 kb on - strand, within A4249_RS04630 at 960.855 kb on - strand, within A4249_RS04630 at 960.855 kb on - strand, within A4249_RS04630 at 960.855 kb on - strand, within A4249_RS04630 at 960.926 kb on + strand, within A4249_RS04630 at 960.926 kb on + strand, within A4249_RS04630 at 960.926 kb on + strand, within A4249_RS04630 at 960.927 kb on - strand, within A4249_RS04630 at 960.927 kb on - strand, within A4249_RS04630 at 960.927 kb on - strand, within A4249_RS04630 at 960.927 kb on - strand, within A4249_RS04630 at 961.115 kb on + strand, within A4249_RS04630 at 961.115 kb on + strand, within A4249_RS04630 at 961.116 kb on - strand, within A4249_RS04630 at 961.116 kb on - strand, within A4249_RS04630 at 961.148 kb on + strand, within A4249_RS04630 at 961.148 kb on + strand, within A4249_RS04630 at 961.148 kb on + strand, within A4249_RS04630 at 961.148 kb on + strand, within A4249_RS04630 at 961.148 kb on + strand, within A4249_RS04630 at 961.148 kb on + strand, within A4249_RS04630 at 961.149 kb on - strand, within A4249_RS04630 at 961.149 kb on - strand, within A4249_RS04630 at 961.241 kb on + strand, within A4249_RS04630 at 961.241 kb on + strand, within A4249_RS04630 at 961.241 kb on + strand, within A4249_RS04630 at 961.241 kb on + strand, within A4249_RS04630 at 961.242 kb on - strand, within A4249_RS04630 at 961.242 kb on - strand, within A4249_RS04630 at 961.244 kb on + strand, within A4249_RS04630 at 961.412 kb on + strand at 961.412 kb on + strand at 961.412 kb on + strand at 961.412 kb on + strand at 961.412 kb on + strand at 961.412 kb on + strand at 961.412 kb on + strand at 961.413 kb on - strand at 961.413 kb on - strand at 961.413 kb on - strand at 961.413 kb on - strand at 961.415 kb on - strand at 961.424 kb on + strand at 961.424 kb on + strand at 961.424 kb on + strand at 961.425 kb on - strand at 961.425 kb on - strand at 961.425 kb on - strand at 961.425 kb on - strand at 961.513 kb on + strand at 961.513 kb on + strand at 961.513 kb on + strand at 961.513 kb on + strand at 961.514 kb on - strand at 961.514 kb on - strand at 961.514 kb on - strand at 961.588 kb on + strand at 961.588 kb on + strand at 961.588 kb on + strand at 961.588 kb on + strand at 961.589 kb on - strand at 961.612 kb on + strand at 961.613 kb on - strand at 961.613 kb on - strand at 961.613 kb on - strand at 962.084 kb on - strand, within A4249_RS04635 at 962.320 kb on + strand, within A4249_RS04635 at 962.320 kb on + strand, within A4249_RS04635 at 962.320 kb on + strand, within A4249_RS04635 at 962.320 kb on + strand, within A4249_RS04635 at 962.320 kb on + strand, within A4249_RS04635 at 962.320 kb on + strand, within A4249_RS04635 at 962.321 kb on - strand, within A4249_RS04635 at 962.321 kb on - strand, within A4249_RS04635 at 962.321 kb on - strand, within A4249_RS04635 at 962.321 kb on - strand, within A4249_RS04635 at 962.321 kb on - strand, within A4249_RS04635 at 962.439 kb on + strand, within A4249_RS04635 at 962.439 kb on + strand, within A4249_RS04635 at 962.440 kb on - strand, within A4249_RS04635 at 962.440 kb on - strand, within A4249_RS04635 at 962.440 kb on - strand, within A4249_RS04635 at 962.440 kb on - strand, within A4249_RS04635 at 962.502 kb on + strand, within A4249_RS04635 at 962.502 kb on + strand, within A4249_RS04635 at 962.503 kb on - strand, within A4249_RS04635 at 962.503 kb on - strand, within A4249_RS04635 at 962.503 kb on - strand, within A4249_RS04635 at 962.503 kb on - strand, within A4249_RS04635 at 962.503 kb on - strand, within A4249_RS04635 at 962.503 kb on - strand, within A4249_RS04635 at 962.503 kb on - strand, within A4249_RS04635 at 962.650 kb on + strand, within A4249_RS04635 at 962.650 kb on + strand, within A4249_RS04635 at 962.650 kb on + strand, within A4249_RS04635 at 962.650 kb on + strand, within A4249_RS04635 at 962.650 kb on + strand, within A4249_RS04635 at 962.650 kb on + strand, within A4249_RS04635 at 962.650 kb on + strand, within A4249_RS04635 at 962.650 kb on + strand, within A4249_RS04635 at 962.651 kb on - strand, within A4249_RS04635 at 962.651 kb on - strand, within A4249_RS04635 at 962.651 kb on - strand, within A4249_RS04635 at 962.659 kb on + strand, within A4249_RS04635 at 962.659 kb on + strand, within A4249_RS04635 at 962.659 kb on + strand, within A4249_RS04635 at 962.659 kb on + strand, within A4249_RS04635 at 962.659 kb on + strand, within A4249_RS04635 at 962.659 kb on + strand, within A4249_RS04635 at 962.659 kb on + strand, within A4249_RS04635 at 962.659 kb on + strand, within A4249_RS04635 at 962.659 kb on + strand, within A4249_RS04635 at 962.659 kb on + strand, within A4249_RS04635 at 962.659 kb on + strand, within A4249_RS04635 at 962.659 kb on + strand, within A4249_RS04635 at 962.659 kb on + strand, within A4249_RS04635 at 962.659 kb on + strand, within A4249_RS04635 at 962.659 kb on + strand, within A4249_RS04635 at 962.660 kb on - strand, within A4249_RS04635 at 962.660 kb on - strand, within A4249_RS04635 at 962.660 kb on - strand, within A4249_RS04635 at 962.660 kb on - strand, within A4249_RS04635 at 962.660 kb on - strand, within A4249_RS04635 at 962.660 kb on - strand, within A4249_RS04635 at 962.660 kb on - strand, within A4249_RS04635 at 962.660 kb on - strand, within A4249_RS04635 at 962.660 kb on - strand, within A4249_RS04635 at 962.660 kb on - strand, within A4249_RS04635 at 962.660 kb on - strand, within A4249_RS04635 at 962.660 kb on - strand, within A4249_RS04635 at 963.103 kb on + strand at 963.103 kb on + strand at 963.103 kb on + strand at 963.103 kb on + strand at 963.103 kb on + strand at 963.103 kb on + strand at 963.104 kb on - strand at 963.104 kb on - strand at 963.104 kb on - strand at 963.253 kb on + strand at 963.254 kb on - strand at 963.254 kb on - strand at 963.254 kb on - strand at 963.375 kb on + strand at 963.375 kb on + strand at 963.375 kb on + strand at 963.375 kb on + strand at 963.375 kb on + strand at 963.375 kb on + strand at 963.375 kb on + strand at 963.375 kb on + strand at 963.375 kb on + strand at 963.375 kb on + strand at 963.375 kb on + strand at 963.375 kb on + strand at 963.375 kb on + strand at 963.376 kb on - strand at 963.376 kb on - strand at 963.376 kb on - strand at 963.376 kb on - strand at 963.376 kb on - strand at 963.376 kb on - strand at 963.376 kb on - strand at 963.376 kb on - strand at 963.376 kb on - strand at 963.380 kb on - strand at 963.471 kb on + strand at 963.471 kb on + strand at 963.658 kb on - strand at 963.686 kb on + strand at 963.686 kb on + strand at 963.686 kb on + strand at 963.686 kb on + strand at 963.686 kb on + strand at 963.686 kb on + strand at 963.686 kb on + strand at 963.686 kb on + strand at 963.687 kb on - strand at 963.687 kb on - strand at 963.687 kb on - strand at 963.687 kb on - strand at 963.687 kb on - strand at 963.687 kb on - strand at 963.687 kb on - strand at 963.687 kb on - strand at 963.687 kb on - strand at 963.689 kb on + strand at 963.689 kb on + strand at 963.690 kb on - strand at 963.690 kb on - strand at 963.729 kb on + strand at 963.730 kb on - strand at 963.730 kb on - strand at 963.730 kb on - strand at 963.730 kb on - strand at 963.934 kb on + strand at 963.934 kb on + strand at 963.934 kb on + strand at 963.934 kb on + strand at 963.934 kb on + strand at 963.934 kb on + strand at 963.934 kb on + strand at 963.935 kb on - strand at 963.935 kb on - strand at 963.935 kb on - strand at 963.935 kb on - strand at 963.935 kb on - strand at 963.935 kb on - strand at 963.935 kb on - strand at 963.935 kb on - strand at 963.935 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Adenine 0.74 mM (C) remove 960,557 + A4249_RS04630 0.47 +0.4 960,557 + A4249_RS04630 0.47 -2.1 960,558 - A4249_RS04630 0.47 +0.5 960,670 + A4249_RS04630 0.53 +0.6 960,671 - A4249_RS04630 0.53 +0.0 960,854 + A4249_RS04630 0.64 -0.7 960,854 + A4249_RS04630 0.64 -0.3 960,854 + A4249_RS04630 0.64 +0.8 960,854 + A4249_RS04630 0.64 -1.2 960,854 + A4249_RS04630 0.64 -0.2 960,854 + A4249_RS04630 0.64 -0.4 960,854 + A4249_RS04630 0.64 +0.2 960,854 + A4249_RS04630 0.64 -0.3 960,855 - A4249_RS04630 0.64 +0.2 960,855 - A4249_RS04630 0.64 +0.3 960,855 - A4249_RS04630 0.64 -0.1 960,855 - A4249_RS04630 0.64 -0.3 960,855 - A4249_RS04630 0.64 +0.4 960,855 - A4249_RS04630 0.64 +0.0 960,855 - A4249_RS04630 0.64 +0.3 960,855 - A4249_RS04630 0.64 +0.2 960,926 + A4249_RS04630 0.68 -0.2 960,926 + A4249_RS04630 0.68 -0.1 960,926 + A4249_RS04630 0.68 +0.2 960,927 - A4249_RS04630 0.68 -0.2 960,927 - A4249_RS04630 0.68 -0.4 960,927 - A4249_RS04630 0.68 -0.3 960,927 - A4249_RS04630 0.68 -0.5 961,115 + A4249_RS04630 0.78 -1.1 961,115 + A4249_RS04630 0.78 -0.7 961,116 - A4249_RS04630 0.78 +0.2 961,116 - A4249_RS04630 0.78 -0.2 961,148 + A4249_RS04630 0.80 +0.2 961,148 + A4249_RS04630 0.80 -0.9 961,148 + A4249_RS04630 0.80 +0.2 961,148 + A4249_RS04630 0.80 -1.5 961,148 + A4249_RS04630 0.80 +0.4 961,148 + A4249_RS04630 0.80 +1.0 961,149 - A4249_RS04630 0.80 +1.5 961,149 - A4249_RS04630 0.80 +0.8 961,241 + A4249_RS04630 0.85 -0.2 961,241 + A4249_RS04630 0.85 -1.3 961,241 + A4249_RS04630 0.85 +0.4 961,241 + A4249_RS04630 0.85 +0.0 961,242 - A4249_RS04630 0.85 +0.4 961,242 - A4249_RS04630 0.85 +1.0 961,244 + A4249_RS04630 0.85 -0.5 961,412 + -0.5 961,412 + -0.2 961,412 + +0.0 961,412 + -0.2 961,412 + -0.9 961,412 + -0.7 961,412 + -1.0 961,413 - +0.2 961,413 - +0.5 961,413 - +0.3 961,413 - -0.6 961,415 - +0.0 961,424 + +0.7 961,424 + -1.1 961,424 + +1.1 961,425 - -0.0 961,425 - +0.1 961,425 - -0.1 961,425 - -0.5 961,513 + +0.7 961,513 + +0.1 961,513 + +0.0 961,513 + -1.8 961,514 - -0.4 961,514 - -0.5 961,514 - -0.4 961,588 + -0.6 961,588 + -1.0 961,588 + -0.4 961,588 + -0.8 961,589 - -1.2 961,612 + +0.1 961,613 - -0.6 961,613 - -0.5 961,613 - -0.8 962,084 - A4249_RS04635 0.33 -1.5 962,320 + A4249_RS04635 0.47 -1.2 962,320 + A4249_RS04635 0.47 -0.3 962,320 + A4249_RS04635 0.47 -1.1 962,320 + A4249_RS04635 0.47 -1.1 962,320 + A4249_RS04635 0.47 -1.1 962,320 + A4249_RS04635 0.47 -0.3 962,321 - A4249_RS04635 0.47 -1.0 962,321 - A4249_RS04635 0.47 -1.2 962,321 - A4249_RS04635 0.47 -1.0 962,321 - A4249_RS04635 0.47 -1.0 962,321 - A4249_RS04635 0.47 -2.0 962,439 + A4249_RS04635 0.54 -1.0 962,439 + A4249_RS04635 0.54 -0.7 962,440 - A4249_RS04635 0.54 -0.2 962,440 - A4249_RS04635 0.54 -0.8 962,440 - A4249_RS04635 0.54 -0.7 962,440 - A4249_RS04635 0.54 -1.1 962,502 + A4249_RS04635 0.57 -1.5 962,502 + A4249_RS04635 0.57 -2.5 962,503 - A4249_RS04635 0.57 -1.0 962,503 - A4249_RS04635 0.57 -1.8 962,503 - A4249_RS04635 0.57 -1.0 962,503 - A4249_RS04635 0.57 -0.5 962,503 - A4249_RS04635 0.57 -0.5 962,503 - A4249_RS04635 0.57 -1.3 962,503 - A4249_RS04635 0.57 -0.7 962,650 + A4249_RS04635 0.66 -0.7 962,650 + A4249_RS04635 0.66 -0.5 962,650 + A4249_RS04635 0.66 -0.8 962,650 + A4249_RS04635 0.66 -0.8 962,650 + A4249_RS04635 0.66 -0.8 962,650 + A4249_RS04635 0.66 -1.0 962,650 + A4249_RS04635 0.66 -1.0 962,650 + A4249_RS04635 0.66 -2.0 962,651 - A4249_RS04635 0.66 -1.0 962,651 - A4249_RS04635 0.66 -0.8 962,651 - A4249_RS04635 0.66 -2.3 962,659 + A4249_RS04635 0.66 -0.2 962,659 + A4249_RS04635 0.66 -1.0 962,659 + A4249_RS04635 0.66 -1.1 962,659 + A4249_RS04635 0.66 -0.2 962,659 + A4249_RS04635 0.66 -1.0 962,659 + A4249_RS04635 0.66 -1.3 962,659 + A4249_RS04635 0.66 -0.4 962,659 + A4249_RS04635 0.66 -0.9 962,659 + A4249_RS04635 0.66 -1.3 962,659 + A4249_RS04635 0.66 -1.2 962,659 + A4249_RS04635 0.66 -1.1 962,659 + A4249_RS04635 0.66 -0.8 962,659 + A4249_RS04635 0.66 -1.3 962,659 + A4249_RS04635 0.66 -1.1 962,659 + A4249_RS04635 0.66 -2.0 962,660 - A4249_RS04635 0.66 -1.4 962,660 - A4249_RS04635 0.66 -1.5 962,660 - A4249_RS04635 0.66 -0.7 962,660 - A4249_RS04635 0.66 -1.4 962,660 - A4249_RS04635 0.66 -1.0 962,660 - A4249_RS04635 0.66 -0.7 962,660 - A4249_RS04635 0.66 -1.0 962,660 - A4249_RS04635 0.66 -0.7 962,660 - A4249_RS04635 0.66 -0.3 962,660 - A4249_RS04635 0.66 -0.6 962,660 - A4249_RS04635 0.66 -0.9 962,660 - A4249_RS04635 0.66 -0.9 963,103 + -1.2 963,103 + -0.4 963,103 + -0.7 963,103 + -0.7 963,103 + -0.8 963,103 + -0.9 963,104 - -0.8 963,104 - -1.3 963,104 - -0.7 963,253 + -0.4 963,254 - +0.8 963,254 - +0.2 963,254 - +0.5 963,375 + +0.8 963,375 + +0.0 963,375 + -0.2 963,375 + +0.7 963,375 + +0.2 963,375 + -0.4 963,375 + +0.9 963,375 + -1.2 963,375 + +0.8 963,375 + -0.2 963,375 + -0.1 963,375 + +0.3 963,375 + -1.0 963,376 - -1.5 963,376 - +0.1 963,376 - -0.1 963,376 - +0.3 963,376 - +0.6 963,376 - +1.2 963,376 - +0.9 963,376 - -0.3 963,376 - -1.0 963,380 - -0.4 963,471 + +1.0 963,471 + +0.2 963,658 - +0.8 963,686 + -1.1 963,686 + -0.3 963,686 + +0.3 963,686 + +0.2 963,686 + +0.0 963,686 + +2.5 963,686 + +1.0 963,686 + +0.2 963,687 - +0.6 963,687 - -0.3 963,687 - +0.4 963,687 - +0.8 963,687 - -0.0 963,687 - +0.2 963,687 - -0.2 963,687 - -1.2 963,687 - +0.3 963,689 + -0.1 963,689 + +0.2 963,690 - +0.4 963,690 - +0.5 963,729 + -0.3 963,730 - -1.5 963,730 - +0.0 963,730 - +0.4 963,730 - -0.9 963,934 + +0.6 963,934 + -2.2 963,934 + -1.2 963,934 + -0.4 963,934 + +0.3 963,934 + +1.0 963,934 + -0.8 963,935 - +0.0 963,935 - -0.3 963,935 - -0.6 963,935 - +0.1 963,935 - -0.6 963,935 - +0.2 963,935 - +0.1 963,935 - +0.0 963,935 - +0.0
Or see this region's nucleotide sequence