Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS04525

Experiment: Adenine 0.74 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS04520 and A4249_RS04525 are separated by 328 nucleotidesA4249_RS04525 and A4249_RS04530 are separated by 101 nucleotidesA4249_RS04530 and A4249_RS04535 overlap by 4 nucleotides A4249_RS04520: A4249_RS04520 - tyrosine--tRNA ligase, at 939,282 to 940,535 _RS04520 A4249_RS04525: A4249_RS04525 - DUF4287 domain-containing protein, at 940,864 to 941,079 _RS04525 A4249_RS04530: A4249_RS04530 - DOMON-like domain-containing protein, at 941,181 to 941,690 _RS04530 A4249_RS04535: A4249_RS04535 - DUF1343 domain-containing protein, at 941,687 to 942,889 _RS04535 Position (kb) 940 941 942Strain fitness (log2 ratio) -2 -1 0 1 2at 940.549 kb on + strandat 940.550 kb on - strandat 940.550 kb on - strandat 940.628 kb on + strandat 940.628 kb on + strandat 940.628 kb on + strandat 940.629 kb on - strandat 940.629 kb on - strandat 940.629 kb on - strandat 940.629 kb on - strandat 940.638 kb on - strandat 940.749 kb on + strandat 940.749 kb on + strandat 940.749 kb on + strandat 940.749 kb on + strandat 940.749 kb on + strandat 940.750 kb on - strandat 940.750 kb on - strandat 940.750 kb on - strandat 940.750 kb on - strandat 940.750 kb on - strandat 940.750 kb on - strandat 940.750 kb on - strandat 940.750 kb on - strandat 940.750 kb on - strandat 940.775 kb on + strandat 940.817 kb on - strandat 940.818 kb on + strandat 940.818 kb on + strandat 940.818 kb on + strandat 940.818 kb on + strandat 940.818 kb on + strandat 940.819 kb on - strandat 940.819 kb on - strandat 940.819 kb on - strandat 940.819 kb on - strandat 940.819 kb on - strandat 940.831 kb on + strandat 940.832 kb on - strandat 940.834 kb on + strandat 940.840 kb on + strandat 940.840 kb on + strandat 940.841 kb on - strandat 940.841 kb on - strandat 940.866 kb on - strandat 940.893 kb on - strand, within A4249_RS04525at 940.893 kb on - strand, within A4249_RS04525at 940.893 kb on - strand, within A4249_RS04525at 941.010 kb on + strand, within A4249_RS04525at 941.010 kb on + strand, within A4249_RS04525at 941.010 kb on + strand, within A4249_RS04525at 941.010 kb on + strand, within A4249_RS04525at 941.010 kb on + strand, within A4249_RS04525at 941.010 kb on + strand, within A4249_RS04525at 941.010 kb on + strand, within A4249_RS04525at 941.011 kb on - strand, within A4249_RS04525at 941.011 kb on - strand, within A4249_RS04525at 941.011 kb on - strand, within A4249_RS04525at 941.011 kb on - strand, within A4249_RS04525at 941.011 kb on - strand, within A4249_RS04525at 941.021 kb on + strand, within A4249_RS04525at 941.022 kb on - strand, within A4249_RS04525at 941.045 kb on + strand, within A4249_RS04525at 941.045 kb on + strand, within A4249_RS04525at 941.045 kb on + strand, within A4249_RS04525at 941.045 kb on + strand, within A4249_RS04525at 941.045 kb on + strand, within A4249_RS04525at 941.045 kb on + strand, within A4249_RS04525at 941.045 kb on + strand, within A4249_RS04525at 941.045 kb on + strand, within A4249_RS04525at 941.045 kb on + strand, within A4249_RS04525at 941.046 kb on - strand, within A4249_RS04525at 941.046 kb on - strand, within A4249_RS04525at 941.046 kb on - strand, within A4249_RS04525at 941.046 kb on - strand, within A4249_RS04525at 941.104 kb on + strandat 941.104 kb on + strandat 941.105 kb on - strandat 941.107 kb on + strandat 941.107 kb on + strandat 941.107 kb on + strandat 941.107 kb on + strandat 941.107 kb on + strandat 941.169 kb on + strandat 941.180 kb on + strandat 941.180 kb on + strandat 941.180 kb on + strandat 941.180 kb on + strandat 941.180 kb on + strandat 941.180 kb on + strandat 941.181 kb on - strandat 941.181 kb on - strandat 941.181 kb on - strandat 941.181 kb on - strandat 941.181 kb on - strandat 941.277 kb on + strand, within A4249_RS04530at 941.277 kb on + strand, within A4249_RS04530at 941.277 kb on + strand, within A4249_RS04530at 941.277 kb on + strand, within A4249_RS04530at 941.277 kb on + strand, within A4249_RS04530at 941.277 kb on + strand, within A4249_RS04530at 941.277 kb on + strand, within A4249_RS04530at 941.277 kb on + strand, within A4249_RS04530at 941.277 kb on + strand, within A4249_RS04530at 941.277 kb on + strand, within A4249_RS04530at 941.277 kb on + strand, within A4249_RS04530at 941.277 kb on + strand, within A4249_RS04530at 941.277 kb on + strand, within A4249_RS04530at 941.277 kb on + strand, within A4249_RS04530at 941.277 kb on + strand, within A4249_RS04530at 941.277 kb on + strand, within A4249_RS04530at 941.277 kb on + strand, within A4249_RS04530at 941.277 kb on + strand, within A4249_RS04530at 941.278 kb on - strand, within A4249_RS04530at 941.278 kb on - strand, within A4249_RS04530at 941.278 kb on - strand, within A4249_RS04530at 941.278 kb on - strand, within A4249_RS04530at 941.278 kb on - strand, within A4249_RS04530at 941.278 kb on - strand, within A4249_RS04530at 941.278 kb on - strand, within A4249_RS04530at 941.278 kb on - strand, within A4249_RS04530at 941.279 kb on + strand, within A4249_RS04530at 941.279 kb on + strand, within A4249_RS04530at 941.279 kb on + strand, within A4249_RS04530at 941.279 kb on + strand, within A4249_RS04530at 941.279 kb on + strand, within A4249_RS04530at 941.279 kb on + strand, within A4249_RS04530at 941.279 kb on + strand, within A4249_RS04530at 941.279 kb on + strand, within A4249_RS04530at 941.279 kb on + strand, within A4249_RS04530at 941.279 kb on + strand, within A4249_RS04530at 941.279 kb on + strand, within A4249_RS04530at 941.279 kb on + strand, within A4249_RS04530at 941.279 kb on + strand, within A4249_RS04530at 941.279 kb on + strand, within A4249_RS04530at 941.280 kb on - strand, within A4249_RS04530at 941.280 kb on - strand, within A4249_RS04530at 941.280 kb on - strand, within A4249_RS04530at 941.280 kb on - strand, within A4249_RS04530at 941.280 kb on - strand, within A4249_RS04530at 941.280 kb on - strand, within A4249_RS04530at 941.280 kb on - strand, within A4249_RS04530at 941.280 kb on - strand, within A4249_RS04530at 941.280 kb on - strand, within A4249_RS04530at 941.280 kb on - strand, within A4249_RS04530at 941.280 kb on - strand, within A4249_RS04530at 941.280 kb on - strand, within A4249_RS04530at 941.397 kb on + strand, within A4249_RS04530at 941.397 kb on + strand, within A4249_RS04530at 941.398 kb on - strand, within A4249_RS04530at 941.398 kb on - strand, within A4249_RS04530at 941.406 kb on + strand, within A4249_RS04530at 941.406 kb on + strand, within A4249_RS04530at 941.406 kb on + strand, within A4249_RS04530at 941.406 kb on + strand, within A4249_RS04530at 941.407 kb on - strand, within A4249_RS04530at 941.407 kb on - strand, within A4249_RS04530at 941.643 kb on - strandat 941.740 kb on + strandat 941.741 kb on - strandat 941.890 kb on + strand, within A4249_RS04535at 941.890 kb on + strand, within A4249_RS04535at 941.890 kb on + strand, within A4249_RS04535at 941.891 kb on - strand, within A4249_RS04535at 941.891 kb on - strand, within A4249_RS04535at 941.891 kb on - strand, within A4249_RS04535at 941.891 kb on - strand, within A4249_RS04535at 941.891 kb on - strand, within A4249_RS04535at 941.949 kb on - strand, within A4249_RS04535at 941.949 kb on - strand, within A4249_RS04535at 942.035 kb on + strand, within A4249_RS04535at 942.036 kb on - strand, within A4249_RS04535at 942.036 kb on - strand, within A4249_RS04535at 942.041 kb on + strand, within A4249_RS04535at 942.041 kb on + strand, within A4249_RS04535at 942.041 kb on + strand, within A4249_RS04535at 942.041 kb on + strand, within A4249_RS04535at 942.041 kb on + strand, within A4249_RS04535at 942.042 kb on - strand, within A4249_RS04535at 942.042 kb on - strand, within A4249_RS04535at 942.042 kb on - strand, within A4249_RS04535at 942.042 kb on - strand, within A4249_RS04535at 942.042 kb on - strand, within A4249_RS04535at 942.042 kb on - strand, within A4249_RS04535at 942.042 kb on - strand, within A4249_RS04535at 942.042 kb on - strand, within A4249_RS04535at 942.042 kb on - strand, within A4249_RS04535at 942.059 kb on + strand, within A4249_RS04535at 942.059 kb on + strand, within A4249_RS04535at 942.059 kb on + strand, within A4249_RS04535at 942.059 kb on + strand, within A4249_RS04535at 942.060 kb on - strand, within A4249_RS04535at 942.060 kb on - strand, within A4249_RS04535

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Per-strain Table

Position Strand Gene LocusTag Fraction Adenine 0.74 mM (C)
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940,549 + -1.1
940,550 - +0.3
940,550 - -0.5
940,628 + +0.6
940,628 + +0.9
940,628 + +0.0
940,629 - +0.1
940,629 - +0.3
940,629 - +0.0
940,629 - +0.9
940,638 - -0.2
940,749 + -0.4
940,749 + +0.5
940,749 + -0.6
940,749 + +0.2
940,749 + -0.1
940,750 - -0.2
940,750 - -0.2
940,750 - -0.1
940,750 - -0.7
940,750 - +0.2
940,750 - +1.8
940,750 - -0.6
940,750 - +1.0
940,750 - +0.1
940,775 + +0.2
940,817 - +0.5
940,818 + -0.3
940,818 + +1.6
940,818 + -0.4
940,818 + -0.9
940,818 + +0.4
940,819 - -1.3
940,819 - -1.1
940,819 - -0.4
940,819 - +0.4
940,819 - +0.8
940,831 + +0.9
940,832 - +1.2
940,834 + -0.5
940,840 + +0.1
940,840 + -0.0
940,841 - +0.2
940,841 - -0.4
940,866 - -0.2
940,893 - A4249_RS04525 0.13 -1.0
940,893 - A4249_RS04525 0.13 -0.2
940,893 - A4249_RS04525 0.13 +0.2
941,010 + A4249_RS04525 0.68 -0.4
941,010 + A4249_RS04525 0.68 -0.0
941,010 + A4249_RS04525 0.68 +0.3
941,010 + A4249_RS04525 0.68 -1.0
941,010 + A4249_RS04525 0.68 +0.3
941,010 + A4249_RS04525 0.68 -0.3
941,010 + A4249_RS04525 0.68 -0.1
941,011 - A4249_RS04525 0.68 +0.2
941,011 - A4249_RS04525 0.68 -0.1
941,011 - A4249_RS04525 0.68 -0.3
941,011 - A4249_RS04525 0.68 -1.4
941,011 - A4249_RS04525 0.68 +0.8
941,021 + A4249_RS04525 0.73 -0.5
941,022 - A4249_RS04525 0.73 +0.3
941,045 + A4249_RS04525 0.84 -0.2
941,045 + A4249_RS04525 0.84 +0.6
941,045 + A4249_RS04525 0.84 +0.8
941,045 + A4249_RS04525 0.84 -0.2
941,045 + A4249_RS04525 0.84 +0.5
941,045 + A4249_RS04525 0.84 -0.2
941,045 + A4249_RS04525 0.84 -0.9
941,045 + A4249_RS04525 0.84 +0.2
941,045 + A4249_RS04525 0.84 -0.4
941,046 - A4249_RS04525 0.84 -2.1
941,046 - A4249_RS04525 0.84 -0.2
941,046 - A4249_RS04525 0.84 -0.2
941,046 - A4249_RS04525 0.84 -0.2
941,104 + +0.3
941,104 + -0.9
941,105 - -1.1
941,107 + +0.0
941,107 + +0.0
941,107 + +0.1
941,107 + -0.8
941,107 + +0.0
941,169 + -1.3
941,180 + +0.2
941,180 + -0.5
941,180 + -0.5
941,180 + -0.3
941,180 + +0.2
941,180 + +0.8
941,181 - +0.1
941,181 - -0.1
941,181 - +1.4
941,181 - +0.4
941,181 - +0.1
941,277 + A4249_RS04530 0.19 -0.3
941,277 + A4249_RS04530 0.19 -0.4
941,277 + A4249_RS04530 0.19 -0.2
941,277 + A4249_RS04530 0.19 -0.0
941,277 + A4249_RS04530 0.19 +1.2
941,277 + A4249_RS04530 0.19 -0.2
941,277 + A4249_RS04530 0.19 -0.2
941,277 + A4249_RS04530 0.19 -0.2
941,277 + A4249_RS04530 0.19 -0.0
941,277 + A4249_RS04530 0.19 -0.5
941,277 + A4249_RS04530 0.19 +1.0
941,277 + A4249_RS04530 0.19 +0.2
941,277 + A4249_RS04530 0.19 -0.2
941,277 + A4249_RS04530 0.19 -0.2
941,277 + A4249_RS04530 0.19 -0.1
941,277 + A4249_RS04530 0.19 -0.5
941,277 + A4249_RS04530 0.19 +0.1
941,277 + A4249_RS04530 0.19 -0.4
941,278 - A4249_RS04530 0.19 -0.2
941,278 - A4249_RS04530 0.19 -0.2
941,278 - A4249_RS04530 0.19 -0.2
941,278 - A4249_RS04530 0.19 -0.8
941,278 - A4249_RS04530 0.19 +0.2
941,278 - A4249_RS04530 0.19 +0.5
941,278 - A4249_RS04530 0.19 -0.4
941,278 - A4249_RS04530 0.19 +0.3
941,279 + A4249_RS04530 0.19 -0.8
941,279 + A4249_RS04530 0.19 -0.1
941,279 + A4249_RS04530 0.19 -1.6
941,279 + A4249_RS04530 0.19 +0.4
941,279 + A4249_RS04530 0.19 -0.4
941,279 + A4249_RS04530 0.19 -0.1
941,279 + A4249_RS04530 0.19 -1.3
941,279 + A4249_RS04530 0.19 -0.1
941,279 + A4249_RS04530 0.19 -0.3
941,279 + A4249_RS04530 0.19 +0.9
941,279 + A4249_RS04530 0.19 +0.7
941,279 + A4249_RS04530 0.19 +0.0
941,279 + A4249_RS04530 0.19 -1.3
941,279 + A4249_RS04530 0.19 +0.2
941,280 - A4249_RS04530 0.19 -0.1
941,280 - A4249_RS04530 0.19 +0.4
941,280 - A4249_RS04530 0.19 -1.9
941,280 - A4249_RS04530 0.19 -0.3
941,280 - A4249_RS04530 0.19 +1.6
941,280 - A4249_RS04530 0.19 -0.9
941,280 - A4249_RS04530 0.19 +0.5
941,280 - A4249_RS04530 0.19 +0.0
941,280 - A4249_RS04530 0.19 +0.5
941,280 - A4249_RS04530 0.19 +0.3
941,280 - A4249_RS04530 0.19 +0.0
941,280 - A4249_RS04530 0.19 +0.8
941,397 + A4249_RS04530 0.42 -0.1
941,397 + A4249_RS04530 0.42 +0.1
941,398 - A4249_RS04530 0.43 -0.1
941,398 - A4249_RS04530 0.43 -1.5
941,406 + A4249_RS04530 0.44 +0.9
941,406 + A4249_RS04530 0.44 +0.1
941,406 + A4249_RS04530 0.44 +0.4
941,406 + A4249_RS04530 0.44 +0.5
941,407 - A4249_RS04530 0.44 -0.2
941,407 - A4249_RS04530 0.44 -0.7
941,643 - -0.7
941,740 + +0.8
941,741 - +0.6
941,890 + A4249_RS04535 0.17 -0.3
941,890 + A4249_RS04535 0.17 +0.1
941,890 + A4249_RS04535 0.17 +0.0
941,891 - A4249_RS04535 0.17 -1.2
941,891 - A4249_RS04535 0.17 -0.6
941,891 - A4249_RS04535 0.17 +0.6
941,891 - A4249_RS04535 0.17 +0.2
941,891 - A4249_RS04535 0.17 +1.8
941,949 - A4249_RS04535 0.22 -0.7
941,949 - A4249_RS04535 0.22 +0.9
942,035 + A4249_RS04535 0.29 -0.8
942,036 - A4249_RS04535 0.29 -0.2
942,036 - A4249_RS04535 0.29 -0.7
942,041 + A4249_RS04535 0.29 +0.7
942,041 + A4249_RS04535 0.29 +0.2
942,041 + A4249_RS04535 0.29 -0.8
942,041 + A4249_RS04535 0.29 -1.7
942,041 + A4249_RS04535 0.29 -0.1
942,042 - A4249_RS04535 0.30 +0.0
942,042 - A4249_RS04535 0.30 +0.3
942,042 - A4249_RS04535 0.30 +1.0
942,042 - A4249_RS04535 0.30 +1.3
942,042 - A4249_RS04535 0.30 +0.0
942,042 - A4249_RS04535 0.30 -0.1
942,042 - A4249_RS04535 0.30 -0.5
942,042 - A4249_RS04535 0.30 +0.6
942,042 - A4249_RS04535 0.30 -1.7
942,059 + A4249_RS04535 0.31 +1.3
942,059 + A4249_RS04535 0.31 +0.8
942,059 + A4249_RS04535 0.31 -0.5
942,059 + A4249_RS04535 0.31 +0.3
942,060 - A4249_RS04535 0.31 -0.8
942,060 - A4249_RS04535 0.31 +0.2

Or see this region's nucleotide sequence