Experiment: Adenine 0.74 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS16505 and A4249_RS04225 are separated by 25 nucleotides A4249_RS04225 and A4249_RS04230 are separated by 199 nucleotides
A4249_RS16505: A4249_RS16505 - SEC-C metal-binding domain-containing protein, at 873,552 to 874,682
_RS16505
A4249_RS04225: A4249_RS04225 - DNA mismatch repair endonuclease MutL, at 874,708 to 876,600
_RS04225
A4249_RS04230: A4249_RS04230 - type I DNA topoisomerase, at 876,800 to 879,406
_RS04230
Position (kb) 874
875
876
877 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 873.813 kb on + strand, within A4249_RS16505 at 873.814 kb on - strand, within A4249_RS16505 at 873.814 kb on - strand, within A4249_RS16505 at 873.912 kb on + strand, within A4249_RS16505 at 874.209 kb on + strand, within A4249_RS16505 at 874.219 kb on + strand, within A4249_RS16505 at 874.402 kb on + strand, within A4249_RS16505 at 874.464 kb on + strand, within A4249_RS16505 at 874.512 kb on + strand, within A4249_RS16505 at 874.513 kb on - strand, within A4249_RS16505 at 874.603 kb on + strand at 874.629 kb on + strand at 874.629 kb on + strand at 874.629 kb on + strand at 874.630 kb on - strand at 874.630 kb on - strand at 874.630 kb on - strand at 874.630 kb on - strand at 874.667 kb on + strand at 874.667 kb on + strand at 874.667 kb on + strand at 874.667 kb on + strand at 874.667 kb on + strand at 874.667 kb on + strand at 874.668 kb on - strand at 874.668 kb on - strand at 874.668 kb on - strand at 874.674 kb on + strand at 874.674 kb on + strand at 874.674 kb on + strand at 874.674 kb on + strand at 874.675 kb on - strand at 874.675 kb on - strand at 874.675 kb on - strand at 874.678 kb on + strand at 874.696 kb on + strand at 874.696 kb on + strand at 874.696 kb on + strand at 874.697 kb on - strand at 874.757 kb on + strand at 874.757 kb on + strand at 874.757 kb on + strand at 874.757 kb on + strand at 874.757 kb on + strand at 874.757 kb on + strand at 874.757 kb on + strand at 874.757 kb on + strand at 874.757 kb on + strand at 874.757 kb on + strand at 874.757 kb on + strand at 874.757 kb on + strand at 874.757 kb on + strand at 874.757 kb on + strand at 874.757 kb on + strand at 874.757 kb on + strand at 874.757 kb on + strand at 874.757 kb on + strand at 874.757 kb on + strand at 874.757 kb on + strand at 874.757 kb on + strand at 874.757 kb on + strand at 874.758 kb on - strand at 874.758 kb on - strand at 874.758 kb on - strand at 874.758 kb on - strand at 874.758 kb on - strand at 874.758 kb on - strand at 874.758 kb on - strand at 874.758 kb on - strand at 874.758 kb on - strand at 874.758 kb on - strand at 874.758 kb on - strand at 874.758 kb on - strand at 874.758 kb on - strand at 874.758 kb on - strand at 874.758 kb on - strand at 874.758 kb on - strand at 874.758 kb on - strand at 875.101 kb on + strand, within A4249_RS04225 at 875.101 kb on + strand, within A4249_RS04225 at 875.101 kb on + strand, within A4249_RS04225 at 875.102 kb on - strand, within A4249_RS04225 at 875.102 kb on - strand, within A4249_RS04225 at 875.102 kb on - strand, within A4249_RS04225 at 875.177 kb on + strand, within A4249_RS04225 at 875.177 kb on + strand, within A4249_RS04225 at 875.177 kb on + strand, within A4249_RS04225 at 875.177 kb on + strand, within A4249_RS04225 at 875.177 kb on + strand, within A4249_RS04225 at 875.177 kb on + strand, within A4249_RS04225 at 875.178 kb on - strand, within A4249_RS04225 at 875.178 kb on - strand, within A4249_RS04225 at 875.178 kb on - strand, within A4249_RS04225 at 875.178 kb on - strand, within A4249_RS04225 at 875.244 kb on + strand, within A4249_RS04225 at 875.244 kb on + strand, within A4249_RS04225 at 875.244 kb on + strand, within A4249_RS04225 at 875.244 kb on + strand, within A4249_RS04225 at 875.245 kb on - strand, within A4249_RS04225 at 875.245 kb on - strand, within A4249_RS04225 at 875.245 kb on - strand, within A4249_RS04225 at 875.245 kb on - strand, within A4249_RS04225 at 875.246 kb on + strand, within A4249_RS04225 at 875.246 kb on + strand, within A4249_RS04225 at 875.246 kb on + strand, within A4249_RS04225 at 875.246 kb on + strand, within A4249_RS04225 at 875.246 kb on + strand, within A4249_RS04225 at 875.246 kb on + strand, within A4249_RS04225 at 875.246 kb on + strand, within A4249_RS04225 at 875.246 kb on + strand, within A4249_RS04225 at 875.246 kb on + strand, within A4249_RS04225 at 875.246 kb on + strand, within A4249_RS04225 at 875.246 kb on + strand, within A4249_RS04225 at 875.246 kb on + strand, within A4249_RS04225 at 875.246 kb on + strand, within A4249_RS04225 at 875.246 kb on + strand, within A4249_RS04225 at 875.246 kb on + strand, within A4249_RS04225 at 875.247 kb on - strand, within A4249_RS04225 at 875.247 kb on - strand, within A4249_RS04225 at 875.247 kb on - strand, within A4249_RS04225 at 875.247 kb on - strand, within A4249_RS04225 at 875.247 kb on - strand, within A4249_RS04225 at 875.247 kb on - strand, within A4249_RS04225 at 875.247 kb on - strand, within A4249_RS04225 at 875.247 kb on - strand, within A4249_RS04225 at 875.247 kb on - strand, within A4249_RS04225 at 875.247 kb on - strand, within A4249_RS04225 at 875.247 kb on - strand, within A4249_RS04225 at 875.247 kb on - strand, within A4249_RS04225 at 875.247 kb on - strand, within A4249_RS04225 at 875.247 kb on - strand, within A4249_RS04225 at 875.247 kb on - strand, within A4249_RS04225 at 875.247 kb on - strand, within A4249_RS04225 at 875.247 kb on - strand, within A4249_RS04225 at 875.247 kb on - strand, within A4249_RS04225 at 875.247 kb on - strand, within A4249_RS04225 at 875.247 kb on - strand, within A4249_RS04225 at 875.247 kb on - strand, within A4249_RS04225 at 875.247 kb on - strand, within A4249_RS04225 at 875.247 kb on - strand, within A4249_RS04225 at 875.247 kb on - strand, within A4249_RS04225 at 875.247 kb on - strand, within A4249_RS04225 at 875.247 kb on - strand, within A4249_RS04225 at 875.247 kb on - strand, within A4249_RS04225 at 875.247 kb on - strand, within A4249_RS04225 at 875.247 kb on - strand, within A4249_RS04225 at 875.247 kb on - strand, within A4249_RS04225 at 875.247 kb on - strand, within A4249_RS04225 at 875.247 kb on - strand, within A4249_RS04225 at 875.247 kb on - strand, within A4249_RS04225 at 875.247 kb on - strand, within A4249_RS04225 at 875.247 kb on - strand, within A4249_RS04225 at 875.504 kb on + strand, within A4249_RS04225 at 875.504 kb on + strand, within A4249_RS04225 at 875.505 kb on - strand, within A4249_RS04225 at 875.505 kb on - strand, within A4249_RS04225 at 875.693 kb on + strand, within A4249_RS04225 at 875.693 kb on + strand, within A4249_RS04225 at 875.693 kb on + strand, within A4249_RS04225 at 875.693 kb on + strand, within A4249_RS04225 at 875.694 kb on - strand, within A4249_RS04225 at 875.694 kb on - strand, within A4249_RS04225 at 875.694 kb on - strand, within A4249_RS04225 at 875.694 kb on - strand, within A4249_RS04225 at 875.694 kb on - strand, within A4249_RS04225 at 875.759 kb on + strand, within A4249_RS04225 at 875.759 kb on + strand, within A4249_RS04225 at 875.759 kb on + strand, within A4249_RS04225 at 875.822 kb on + strand, within A4249_RS04225 at 875.822 kb on + strand, within A4249_RS04225 at 875.822 kb on + strand, within A4249_RS04225 at 875.822 kb on + strand, within A4249_RS04225 at 875.822 kb on + strand, within A4249_RS04225 at 875.822 kb on + strand, within A4249_RS04225 at 875.822 kb on + strand, within A4249_RS04225 at 875.822 kb on + strand, within A4249_RS04225 at 875.823 kb on - strand, within A4249_RS04225 at 875.823 kb on - strand, within A4249_RS04225 at 875.823 kb on - strand, within A4249_RS04225 at 875.823 kb on - strand, within A4249_RS04225 at 875.823 kb on - strand, within A4249_RS04225 at 875.823 kb on - strand, within A4249_RS04225 at 875.849 kb on + strand, within A4249_RS04225 at 875.849 kb on + strand, within A4249_RS04225 at 875.849 kb on + strand, within A4249_RS04225 at 875.850 kb on - strand, within A4249_RS04225 at 875.867 kb on + strand, within A4249_RS04225 at 876.081 kb on + strand, within A4249_RS04225 at 876.082 kb on - strand, within A4249_RS04225 at 876.131 kb on + strand, within A4249_RS04225 at 876.131 kb on + strand, within A4249_RS04225 at 876.131 kb on + strand, within A4249_RS04225 at 876.131 kb on + strand, within A4249_RS04225 at 876.131 kb on + strand, within A4249_RS04225 at 876.131 kb on + strand, within A4249_RS04225 at 876.131 kb on + strand, within A4249_RS04225 at 876.131 kb on + strand, within A4249_RS04225 at 876.132 kb on - strand, within A4249_RS04225 at 876.132 kb on - strand, within A4249_RS04225 at 876.132 kb on - strand, within A4249_RS04225 at 876.477 kb on + strand at 876.614 kb on + strand at 876.614 kb on + strand at 876.615 kb on - strand at 876.615 kb on - strand at 876.709 kb on + strand at 876.709 kb on + strand at 876.710 kb on - strand at 876.710 kb on - strand at 876.710 kb on - strand at 877.006 kb on - strand at 877.006 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Adenine 0.74 mM (C) remove 873,813 + A4249_RS16505 0.23 -1.2 873,814 - A4249_RS16505 0.23 -0.1 873,814 - A4249_RS16505 0.23 +1.1 873,912 + A4249_RS16505 0.32 +0.1 874,209 + A4249_RS16505 0.58 -0.0 874,219 + A4249_RS16505 0.59 -0.8 874,402 + A4249_RS16505 0.75 +0.8 874,464 + A4249_RS16505 0.81 -1.0 874,512 + A4249_RS16505 0.85 +1.5 874,513 - A4249_RS16505 0.85 -0.7 874,603 + -0.2 874,629 + +1.3 874,629 + +0.1 874,629 + +0.1 874,630 - +0.9 874,630 - -0.4 874,630 - +0.8 874,630 - +0.2 874,667 + +0.8 874,667 + +0.2 874,667 + +0.7 874,667 + +0.2 874,667 + +0.5 874,667 + +0.9 874,668 - -1.9 874,668 - -0.5 874,668 - +0.0 874,674 + +0.1 874,674 + -0.6 874,674 + -0.4 874,674 + +0.1 874,675 - -0.7 874,675 - -0.7 874,675 - +0.1 874,678 + -0.2 874,696 + +0.4 874,696 + +1.1 874,696 + +0.0 874,697 - +0.8 874,757 + -0.2 874,757 + +0.4 874,757 + -1.2 874,757 + +0.8 874,757 + -0.7 874,757 + -0.2 874,757 + +0.2 874,757 + -0.9 874,757 + +0.5 874,757 + -0.5 874,757 + -2.9 874,757 + -0.3 874,757 + +0.8 874,757 + +0.5 874,757 + +0.3 874,757 + -0.0 874,757 + +0.1 874,757 + -0.3 874,757 + -0.1 874,757 + -0.1 874,757 + -1.0 874,757 + +0.1 874,758 - +0.0 874,758 - -0.3 874,758 - -1.1 874,758 - +0.1 874,758 - +0.6 874,758 - -0.6 874,758 - -1.1 874,758 - -0.9 874,758 - -0.3 874,758 - +1.9 874,758 - +1.2 874,758 - -0.1 874,758 - -0.5 874,758 - -0.2 874,758 - +0.5 874,758 - +0.1 874,758 - +0.6 875,101 + A4249_RS04225 0.21 +1.6 875,101 + A4249_RS04225 0.21 -1.2 875,101 + A4249_RS04225 0.21 +0.0 875,102 - A4249_RS04225 0.21 -0.0 875,102 - A4249_RS04225 0.21 -0.5 875,102 - A4249_RS04225 0.21 -0.4 875,177 + A4249_RS04225 0.25 +0.9 875,177 + A4249_RS04225 0.25 +0.1 875,177 + A4249_RS04225 0.25 +0.6 875,177 + A4249_RS04225 0.25 +0.3 875,177 + A4249_RS04225 0.25 +0.4 875,177 + A4249_RS04225 0.25 +0.3 875,178 - A4249_RS04225 0.25 -0.4 875,178 - A4249_RS04225 0.25 +0.4 875,178 - A4249_RS04225 0.25 -1.0 875,178 - A4249_RS04225 0.25 -0.3 875,244 + A4249_RS04225 0.28 +0.4 875,244 + A4249_RS04225 0.28 -1.7 875,244 + A4249_RS04225 0.28 +0.1 875,244 + A4249_RS04225 0.28 -0.0 875,245 - A4249_RS04225 0.28 -0.6 875,245 - A4249_RS04225 0.28 -0.5 875,245 - A4249_RS04225 0.28 +0.5 875,245 - A4249_RS04225 0.28 -0.1 875,246 + A4249_RS04225 0.28 +0.5 875,246 + A4249_RS04225 0.28 +0.5 875,246 + A4249_RS04225 0.28 +0.3 875,246 + A4249_RS04225 0.28 -1.2 875,246 + A4249_RS04225 0.28 +0.2 875,246 + A4249_RS04225 0.28 -1.8 875,246 + A4249_RS04225 0.28 -0.2 875,246 + A4249_RS04225 0.28 -0.2 875,246 + A4249_RS04225 0.28 +0.1 875,246 + A4249_RS04225 0.28 +0.8 875,246 + A4249_RS04225 0.28 +0.6 875,246 + A4249_RS04225 0.28 -1.3 875,246 + A4249_RS04225 0.28 -0.4 875,246 + A4249_RS04225 0.28 +0.3 875,246 + A4249_RS04225 0.28 +0.7 875,247 - A4249_RS04225 0.28 +1.0 875,247 - A4249_RS04225 0.28 -0.5 875,247 - A4249_RS04225 0.28 -0.7 875,247 - A4249_RS04225 0.28 -1.1 875,247 - A4249_RS04225 0.28 +2.0 875,247 - A4249_RS04225 0.28 -0.0 875,247 - A4249_RS04225 0.28 +0.7 875,247 - A4249_RS04225 0.28 -1.5 875,247 - A4249_RS04225 0.28 -0.1 875,247 - A4249_RS04225 0.28 -0.2 875,247 - A4249_RS04225 0.28 +0.3 875,247 - A4249_RS04225 0.28 +0.8 875,247 - A4249_RS04225 0.28 -0.3 875,247 - A4249_RS04225 0.28 +0.9 875,247 - A4249_RS04225 0.28 -0.4 875,247 - A4249_RS04225 0.28 -0.3 875,247 - A4249_RS04225 0.28 -1.0 875,247 - A4249_RS04225 0.28 -0.7 875,247 - A4249_RS04225 0.28 +1.3 875,247 - A4249_RS04225 0.28 -1.9 875,247 - A4249_RS04225 0.28 -0.7 875,247 - A4249_RS04225 0.28 -0.3 875,247 - A4249_RS04225 0.28 -1.5 875,247 - A4249_RS04225 0.28 +0.3 875,247 - A4249_RS04225 0.28 -1.3 875,247 - A4249_RS04225 0.28 +0.7 875,247 - A4249_RS04225 0.28 -0.1 875,247 - A4249_RS04225 0.28 +0.4 875,247 - A4249_RS04225 0.28 -1.2 875,247 - A4249_RS04225 0.28 -0.1 875,247 - A4249_RS04225 0.28 -0.8 875,247 - A4249_RS04225 0.28 +0.6 875,247 - A4249_RS04225 0.28 -2.1 875,247 - A4249_RS04225 0.28 +0.5 875,247 - A4249_RS04225 0.28 +0.4 875,504 + A4249_RS04225 0.42 -0.2 875,504 + A4249_RS04225 0.42 +0.7 875,505 - A4249_RS04225 0.42 +0.6 875,505 - A4249_RS04225 0.42 -0.3 875,693 + A4249_RS04225 0.52 +0.5 875,693 + A4249_RS04225 0.52 -0.2 875,693 + A4249_RS04225 0.52 +0.1 875,693 + A4249_RS04225 0.52 -0.1 875,694 - A4249_RS04225 0.52 +0.3 875,694 - A4249_RS04225 0.52 -1.7 875,694 - A4249_RS04225 0.52 +0.1 875,694 - A4249_RS04225 0.52 +1.2 875,694 - A4249_RS04225 0.52 -0.1 875,759 + A4249_RS04225 0.56 +0.1 875,759 + A4249_RS04225 0.56 +0.9 875,759 + A4249_RS04225 0.56 +0.2 875,822 + A4249_RS04225 0.59 -0.1 875,822 + A4249_RS04225 0.59 -0.0 875,822 + A4249_RS04225 0.59 -1.1 875,822 + A4249_RS04225 0.59 -0.2 875,822 + A4249_RS04225 0.59 -0.4 875,822 + A4249_RS04225 0.59 -0.2 875,822 + A4249_RS04225 0.59 -0.0 875,822 + A4249_RS04225 0.59 +0.2 875,823 - A4249_RS04225 0.59 -0.4 875,823 - A4249_RS04225 0.59 -0.6 875,823 - A4249_RS04225 0.59 +0.1 875,823 - A4249_RS04225 0.59 +0.6 875,823 - A4249_RS04225 0.59 +1.2 875,823 - A4249_RS04225 0.59 +0.1 875,849 + A4249_RS04225 0.60 -0.7 875,849 + A4249_RS04225 0.60 -0.3 875,849 + A4249_RS04225 0.60 -0.4 875,850 - A4249_RS04225 0.60 -0.5 875,867 + A4249_RS04225 0.61 +0.5 876,081 + A4249_RS04225 0.73 +0.3 876,082 - A4249_RS04225 0.73 +0.2 876,131 + A4249_RS04225 0.75 -0.2 876,131 + A4249_RS04225 0.75 +0.0 876,131 + A4249_RS04225 0.75 +0.2 876,131 + A4249_RS04225 0.75 -0.1 876,131 + A4249_RS04225 0.75 +0.5 876,131 + A4249_RS04225 0.75 +0.4 876,131 + A4249_RS04225 0.75 +0.1 876,131 + A4249_RS04225 0.75 +0.7 876,132 - A4249_RS04225 0.75 -0.1 876,132 - A4249_RS04225 0.75 +0.2 876,132 - A4249_RS04225 0.75 -0.1 876,477 + -0.7 876,614 + -1.3 876,614 + +0.3 876,615 - +0.7 876,615 - +0.1 876,709 + +0.3 876,709 + +0.8 876,710 - -0.3 876,710 - +0.2 876,710 - +0.1 877,006 - +0.8 877,006 - -2.3
Or see this region's nucleotide sequence