Experiment: Adenine 0.74 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS04110 and A4249_RS04115 are separated by 124 nucleotides A4249_RS04115 and A4249_RS04120 are separated by 98 nucleotides A4249_RS04120 and A4249_RS04125 are separated by 52 nucleotides
A4249_RS04110: A4249_RS04110 - response regulator, at 853,568 to 855,385
_RS04110
A4249_RS04115: A4249_RS04115 - RcnB family protein, at 855,510 to 856,004
_RS04115
A4249_RS04120: A4249_RS04120 - cisplatin damage response ATP-dependent DNA ligase, at 856,103 to 857,791
_RS04120
A4249_RS04125: A4249_RS04125 - mechanosensitive ion channel family protein, at 857,844 to 858,797
_RS04125
Position (kb) 856
857
858 Strain fitness (log2 ratio) -2
-1
0
1
2 at 855.266 kb on + strand at 855.267 kb on - strand at 855.463 kb on + strand at 855.463 kb on + strand at 855.463 kb on + strand at 855.463 kb on + strand at 855.463 kb on + strand at 855.463 kb on + strand at 855.463 kb on + strand at 855.463 kb on + strand at 855.464 kb on - strand at 855.464 kb on - strand at 855.464 kb on - strand at 855.651 kb on + strand, within A4249_RS04115 at 855.651 kb on + strand, within A4249_RS04115 at 855.721 kb on - strand, within A4249_RS04115 at 855.721 kb on - strand, within A4249_RS04115 at 855.741 kb on + strand, within A4249_RS04115 at 855.741 kb on + strand, within A4249_RS04115 at 855.742 kb on - strand, within A4249_RS04115 at 855.742 kb on - strand, within A4249_RS04115 at 855.742 kb on - strand, within A4249_RS04115 at 855.742 kb on - strand, within A4249_RS04115 at 855.771 kb on + strand, within A4249_RS04115 at 855.771 kb on + strand, within A4249_RS04115 at 855.771 kb on + strand, within A4249_RS04115 at 855.771 kb on + strand, within A4249_RS04115 at 855.771 kb on + strand, within A4249_RS04115 at 855.771 kb on + strand, within A4249_RS04115 at 855.772 kb on - strand, within A4249_RS04115 at 855.786 kb on + strand, within A4249_RS04115 at 855.786 kb on + strand, within A4249_RS04115 at 855.786 kb on + strand, within A4249_RS04115 at 855.786 kb on + strand, within A4249_RS04115 at 855.786 kb on + strand, within A4249_RS04115 at 855.787 kb on - strand, within A4249_RS04115 at 855.787 kb on - strand, within A4249_RS04115 at 855.787 kb on - strand, within A4249_RS04115 at 855.787 kb on - strand, within A4249_RS04115 at 855.787 kb on - strand, within A4249_RS04115 at 855.787 kb on - strand, within A4249_RS04115 at 855.805 kb on - strand, within A4249_RS04115 at 855.825 kb on + strand, within A4249_RS04115 at 855.825 kb on + strand, within A4249_RS04115 at 855.825 kb on + strand, within A4249_RS04115 at 855.825 kb on + strand, within A4249_RS04115 at 855.825 kb on + strand, within A4249_RS04115 at 855.825 kb on + strand, within A4249_RS04115 at 855.825 kb on + strand, within A4249_RS04115 at 855.825 kb on + strand, within A4249_RS04115 at 855.826 kb on - strand, within A4249_RS04115 at 855.826 kb on - strand, within A4249_RS04115 at 855.826 kb on - strand, within A4249_RS04115 at 855.826 kb on - strand, within A4249_RS04115 at 855.826 kb on - strand, within A4249_RS04115 at 855.826 kb on - strand, within A4249_RS04115 at 855.826 kb on - strand, within A4249_RS04115 at 855.826 kb on - strand, within A4249_RS04115 at 855.846 kb on + strand, within A4249_RS04115 at 855.847 kb on - strand, within A4249_RS04115 at 855.847 kb on - strand, within A4249_RS04115 at 855.864 kb on + strand, within A4249_RS04115 at 855.864 kb on + strand, within A4249_RS04115 at 855.864 kb on + strand, within A4249_RS04115 at 855.864 kb on + strand, within A4249_RS04115 at 855.864 kb on + strand, within A4249_RS04115 at 855.864 kb on + strand, within A4249_RS04115 at 855.864 kb on + strand, within A4249_RS04115 at 855.865 kb on - strand, within A4249_RS04115 at 855.865 kb on - strand, within A4249_RS04115 at 855.865 kb on - strand, within A4249_RS04115 at 855.865 kb on - strand, within A4249_RS04115 at 855.879 kb on + strand, within A4249_RS04115 at 855.879 kb on + strand, within A4249_RS04115 at 855.879 kb on + strand, within A4249_RS04115 at 855.879 kb on + strand, within A4249_RS04115 at 855.879 kb on + strand, within A4249_RS04115 at 855.879 kb on + strand, within A4249_RS04115 at 855.880 kb on - strand, within A4249_RS04115 at 855.880 kb on - strand, within A4249_RS04115 at 855.880 kb on - strand, within A4249_RS04115 at 855.880 kb on - strand, within A4249_RS04115 at 855.880 kb on - strand, within A4249_RS04115 at 855.880 kb on - strand, within A4249_RS04115 at 855.881 kb on + strand, within A4249_RS04115 at 855.881 kb on + strand, within A4249_RS04115 at 855.882 kb on - strand, within A4249_RS04115 at 855.916 kb on - strand, within A4249_RS04115 at 855.921 kb on + strand, within A4249_RS04115 at 855.921 kb on + strand, within A4249_RS04115 at 855.921 kb on + strand, within A4249_RS04115 at 855.921 kb on + strand, within A4249_RS04115 at 855.921 kb on + strand, within A4249_RS04115 at 855.921 kb on + strand, within A4249_RS04115 at 855.921 kb on + strand, within A4249_RS04115 at 855.922 kb on - strand, within A4249_RS04115 at 855.922 kb on - strand, within A4249_RS04115 at 855.922 kb on - strand, within A4249_RS04115 at 855.922 kb on - strand, within A4249_RS04115 at 855.922 kb on - strand, within A4249_RS04115 at 855.922 kb on - strand, within A4249_RS04115 at 855.922 kb on - strand, within A4249_RS04115 at 855.922 kb on - strand, within A4249_RS04115 at 855.922 kb on - strand, within A4249_RS04115 at 856.021 kb on + strand at 856.021 kb on + strand at 856.021 kb on + strand at 856.181 kb on + strand at 856.182 kb on - strand at 856.322 kb on + strand, within A4249_RS04120 at 856.322 kb on + strand, within A4249_RS04120 at 856.323 kb on - strand, within A4249_RS04120 at 856.323 kb on - strand, within A4249_RS04120 at 856.328 kb on + strand, within A4249_RS04120 at 856.328 kb on + strand, within A4249_RS04120 at 856.328 kb on + strand, within A4249_RS04120 at 856.328 kb on + strand, within A4249_RS04120 at 856.328 kb on + strand, within A4249_RS04120 at 856.328 kb on + strand, within A4249_RS04120 at 856.328 kb on + strand, within A4249_RS04120 at 856.328 kb on + strand, within A4249_RS04120 at 856.328 kb on + strand, within A4249_RS04120 at 856.328 kb on + strand, within A4249_RS04120 at 856.328 kb on + strand, within A4249_RS04120 at 856.328 kb on + strand, within A4249_RS04120 at 856.328 kb on + strand, within A4249_RS04120 at 856.328 kb on + strand, within A4249_RS04120 at 856.328 kb on + strand, within A4249_RS04120 at 856.328 kb on + strand, within A4249_RS04120 at 856.329 kb on - strand, within A4249_RS04120 at 856.329 kb on - strand, within A4249_RS04120 at 856.329 kb on - strand, within A4249_RS04120 at 856.329 kb on - strand, within A4249_RS04120 at 856.329 kb on - strand, within A4249_RS04120 at 856.329 kb on - strand, within A4249_RS04120 at 856.329 kb on - strand, within A4249_RS04120 at 856.329 kb on - strand, within A4249_RS04120 at 856.329 kb on - strand, within A4249_RS04120 at 856.329 kb on - strand, within A4249_RS04120 at 856.329 kb on - strand, within A4249_RS04120 at 856.329 kb on - strand, within A4249_RS04120 at 856.329 kb on - strand, within A4249_RS04120 at 856.329 kb on - strand, within A4249_RS04120 at 856.329 kb on - strand, within A4249_RS04120 at 856.329 kb on - strand, within A4249_RS04120 at 856.329 kb on - strand, within A4249_RS04120 at 856.832 kb on + strand, within A4249_RS04120 at 856.833 kb on - strand, within A4249_RS04120 at 856.861 kb on - strand, within A4249_RS04120 at 856.861 kb on - strand, within A4249_RS04120 at 856.861 kb on - strand, within A4249_RS04120 at 856.861 kb on - strand, within A4249_RS04120 at 856.878 kb on + strand, within A4249_RS04120 at 856.878 kb on + strand, within A4249_RS04120 at 856.879 kb on - strand, within A4249_RS04120 at 856.879 kb on - strand, within A4249_RS04120 at 856.879 kb on - strand, within A4249_RS04120 at 856.901 kb on + strand, within A4249_RS04120 at 856.902 kb on - strand, within A4249_RS04120 at 857.041 kb on + strand, within A4249_RS04120 at 857.041 kb on + strand, within A4249_RS04120 at 857.099 kb on + strand, within A4249_RS04120 at 857.099 kb on + strand, within A4249_RS04120 at 857.099 kb on + strand, within A4249_RS04120 at 857.100 kb on - strand, within A4249_RS04120 at 857.188 kb on + strand, within A4249_RS04120 at 857.188 kb on + strand, within A4249_RS04120 at 857.225 kb on + strand, within A4249_RS04120 at 857.225 kb on + strand, within A4249_RS04120 at 857.225 kb on + strand, within A4249_RS04120 at 857.226 kb on - strand, within A4249_RS04120 at 857.226 kb on - strand, within A4249_RS04120 at 857.226 kb on - strand, within A4249_RS04120 at 857.226 kb on - strand, within A4249_RS04120 at 857.319 kb on - strand, within A4249_RS04120 at 857.393 kb on + strand, within A4249_RS04120 at 857.393 kb on + strand, within A4249_RS04120 at 857.393 kb on + strand, within A4249_RS04120 at 857.393 kb on + strand, within A4249_RS04120 at 857.393 kb on + strand, within A4249_RS04120 at 857.393 kb on + strand, within A4249_RS04120 at 857.393 kb on + strand, within A4249_RS04120 at 857.393 kb on + strand, within A4249_RS04120 at 857.393 kb on + strand, within A4249_RS04120 at 857.394 kb on - strand, within A4249_RS04120 at 857.394 kb on - strand, within A4249_RS04120 at 857.394 kb on - strand, within A4249_RS04120 at 857.429 kb on + strand, within A4249_RS04120 at 857.429 kb on + strand, within A4249_RS04120 at 857.430 kb on - strand, within A4249_RS04120 at 857.430 kb on - strand, within A4249_RS04120 at 857.430 kb on - strand, within A4249_RS04120 at 857.438 kb on + strand, within A4249_RS04120 at 857.438 kb on + strand, within A4249_RS04120 at 857.439 kb on - strand, within A4249_RS04120 at 857.492 kb on + strand, within A4249_RS04120 at 857.493 kb on - strand, within A4249_RS04120 at 857.493 kb on - strand, within A4249_RS04120 at 857.503 kb on + strand, within A4249_RS04120 at 857.736 kb on + strand at 857.736 kb on + strand at 857.736 kb on + strand at 857.736 kb on + strand at 857.737 kb on - strand at 857.737 kb on - strand at 857.737 kb on - strand at 857.737 kb on - strand at 857.737 kb on - strand at 857.737 kb on - strand at 858.035 kb on + strand, within A4249_RS04125 at 858.035 kb on + strand, within A4249_RS04125 at 858.035 kb on + strand, within A4249_RS04125 at 858.036 kb on - strand, within A4249_RS04125 at 858.036 kb on - strand, within A4249_RS04125 at 858.036 kb on - strand, within A4249_RS04125 at 858.036 kb on - strand, within A4249_RS04125 at 858.036 kb on - strand, within A4249_RS04125 at 858.245 kb on + strand, within A4249_RS04125
Per-strain Table
Position Strand Gene LocusTag Fraction Adenine 0.74 mM (C) remove 855,266 + -0.1 855,267 - +0.1 855,463 + -0.2 855,463 + -0.7 855,463 + +0.1 855,463 + -0.0 855,463 + +0.9 855,463 + -0.3 855,463 + -0.5 855,463 + +0.3 855,464 - -0.5 855,464 - +0.2 855,464 - -1.1 855,651 + A4249_RS04115 0.28 +0.1 855,651 + A4249_RS04115 0.28 -0.3 855,721 - A4249_RS04115 0.43 -0.1 855,721 - A4249_RS04115 0.43 -0.7 855,741 + A4249_RS04115 0.47 +0.3 855,741 + A4249_RS04115 0.47 -1.1 855,742 - A4249_RS04115 0.47 -2.0 855,742 - A4249_RS04115 0.47 +0.7 855,742 - A4249_RS04115 0.47 +0.2 855,742 - A4249_RS04115 0.47 +0.4 855,771 + A4249_RS04115 0.53 -0.4 855,771 + A4249_RS04115 0.53 +0.0 855,771 + A4249_RS04115 0.53 -0.2 855,771 + A4249_RS04115 0.53 -0.0 855,771 + A4249_RS04115 0.53 -2.1 855,771 + A4249_RS04115 0.53 -0.6 855,772 - A4249_RS04115 0.53 -0.7 855,786 + A4249_RS04115 0.56 -0.4 855,786 + A4249_RS04115 0.56 +0.7 855,786 + A4249_RS04115 0.56 +0.2 855,786 + A4249_RS04115 0.56 -0.5 855,786 + A4249_RS04115 0.56 -1.9 855,787 - A4249_RS04115 0.56 -0.2 855,787 - A4249_RS04115 0.56 -0.8 855,787 - A4249_RS04115 0.56 +0.3 855,787 - A4249_RS04115 0.56 +0.6 855,787 - A4249_RS04115 0.56 +0.1 855,787 - A4249_RS04115 0.56 +0.5 855,805 - A4249_RS04115 0.60 -0.6 855,825 + A4249_RS04115 0.64 -0.4 855,825 + A4249_RS04115 0.64 -0.2 855,825 + A4249_RS04115 0.64 -0.7 855,825 + A4249_RS04115 0.64 -0.3 855,825 + A4249_RS04115 0.64 +0.4 855,825 + A4249_RS04115 0.64 -1.5 855,825 + A4249_RS04115 0.64 -0.7 855,825 + A4249_RS04115 0.64 +1.1 855,826 - A4249_RS04115 0.64 -0.1 855,826 - A4249_RS04115 0.64 +1.7 855,826 - A4249_RS04115 0.64 -2.0 855,826 - A4249_RS04115 0.64 -0.1 855,826 - A4249_RS04115 0.64 -0.2 855,826 - A4249_RS04115 0.64 -2.4 855,826 - A4249_RS04115 0.64 +0.3 855,826 - A4249_RS04115 0.64 -0.6 855,846 + A4249_RS04115 0.68 -0.3 855,847 - A4249_RS04115 0.68 +0.3 855,847 - A4249_RS04115 0.68 +0.3 855,864 + A4249_RS04115 0.72 -0.7 855,864 + A4249_RS04115 0.72 +0.1 855,864 + A4249_RS04115 0.72 -0.3 855,864 + A4249_RS04115 0.72 +0.4 855,864 + A4249_RS04115 0.72 -0.1 855,864 + A4249_RS04115 0.72 -0.2 855,864 + A4249_RS04115 0.72 +0.6 855,865 - A4249_RS04115 0.72 -0.0 855,865 - A4249_RS04115 0.72 +0.0 855,865 - A4249_RS04115 0.72 +0.5 855,865 - A4249_RS04115 0.72 -1.1 855,879 + A4249_RS04115 0.75 -0.2 855,879 + A4249_RS04115 0.75 -0.3 855,879 + A4249_RS04115 0.75 -0.3 855,879 + A4249_RS04115 0.75 -0.7 855,879 + A4249_RS04115 0.75 +1.0 855,879 + A4249_RS04115 0.75 -0.4 855,880 - A4249_RS04115 0.75 +0.8 855,880 - A4249_RS04115 0.75 +0.4 855,880 - A4249_RS04115 0.75 -0.4 855,880 - A4249_RS04115 0.75 +0.5 855,880 - A4249_RS04115 0.75 +0.9 855,880 - A4249_RS04115 0.75 +0.0 855,881 + A4249_RS04115 0.75 -0.3 855,881 + A4249_RS04115 0.75 -0.2 855,882 - A4249_RS04115 0.75 +0.2 855,916 - A4249_RS04115 0.82 -1.2 855,921 + A4249_RS04115 0.83 -0.6 855,921 + A4249_RS04115 0.83 -0.4 855,921 + A4249_RS04115 0.83 +0.1 855,921 + A4249_RS04115 0.83 -0.1 855,921 + A4249_RS04115 0.83 -0.1 855,921 + A4249_RS04115 0.83 -0.4 855,921 + A4249_RS04115 0.83 +1.0 855,922 - A4249_RS04115 0.83 -0.5 855,922 - A4249_RS04115 0.83 +0.2 855,922 - A4249_RS04115 0.83 +0.1 855,922 - A4249_RS04115 0.83 -0.5 855,922 - A4249_RS04115 0.83 +0.1 855,922 - A4249_RS04115 0.83 -1.5 855,922 - A4249_RS04115 0.83 +0.5 855,922 - A4249_RS04115 0.83 +0.1 855,922 - A4249_RS04115 0.83 -0.3 856,021 + +0.3 856,021 + -0.7 856,021 + -0.1 856,181 + +0.8 856,182 - +0.1 856,322 + A4249_RS04120 0.13 +1.0 856,322 + A4249_RS04120 0.13 -0.2 856,323 - A4249_RS04120 0.13 +1.6 856,323 - A4249_RS04120 0.13 +0.4 856,328 + A4249_RS04120 0.13 +0.7 856,328 + A4249_RS04120 0.13 -0.1 856,328 + A4249_RS04120 0.13 +1.8 856,328 + A4249_RS04120 0.13 +0.9 856,328 + A4249_RS04120 0.13 -0.0 856,328 + A4249_RS04120 0.13 -0.7 856,328 + A4249_RS04120 0.13 -0.1 856,328 + A4249_RS04120 0.13 -0.1 856,328 + A4249_RS04120 0.13 -0.2 856,328 + A4249_RS04120 0.13 +1.1 856,328 + A4249_RS04120 0.13 -0.2 856,328 + A4249_RS04120 0.13 -0.5 856,328 + A4249_RS04120 0.13 -0.3 856,328 + A4249_RS04120 0.13 -0.5 856,328 + A4249_RS04120 0.13 -0.3 856,328 + A4249_RS04120 0.13 -0.6 856,329 - A4249_RS04120 0.13 -1.7 856,329 - A4249_RS04120 0.13 +0.2 856,329 - A4249_RS04120 0.13 -0.1 856,329 - A4249_RS04120 0.13 -0.2 856,329 - A4249_RS04120 0.13 -1.4 856,329 - A4249_RS04120 0.13 -0.1 856,329 - A4249_RS04120 0.13 +0.1 856,329 - A4249_RS04120 0.13 -0.3 856,329 - A4249_RS04120 0.13 -0.2 856,329 - A4249_RS04120 0.13 -1.4 856,329 - A4249_RS04120 0.13 +0.1 856,329 - A4249_RS04120 0.13 +1.1 856,329 - A4249_RS04120 0.13 +0.5 856,329 - A4249_RS04120 0.13 -0.1 856,329 - A4249_RS04120 0.13 +0.4 856,329 - A4249_RS04120 0.13 +0.1 856,329 - A4249_RS04120 0.13 -1.1 856,832 + A4249_RS04120 0.43 +1.1 856,833 - A4249_RS04120 0.43 +0.3 856,861 - A4249_RS04120 0.45 -0.2 856,861 - A4249_RS04120 0.45 +0.1 856,861 - A4249_RS04120 0.45 -0.9 856,861 - A4249_RS04120 0.45 +1.5 856,878 + A4249_RS04120 0.46 -0.3 856,878 + A4249_RS04120 0.46 +0.2 856,879 - A4249_RS04120 0.46 -1.0 856,879 - A4249_RS04120 0.46 -0.1 856,879 - A4249_RS04120 0.46 -0.1 856,901 + A4249_RS04120 0.47 +0.4 856,902 - A4249_RS04120 0.47 -0.4 857,041 + A4249_RS04120 0.56 -0.3 857,041 + A4249_RS04120 0.56 +0.4 857,099 + A4249_RS04120 0.59 +0.6 857,099 + A4249_RS04120 0.59 -0.1 857,099 + A4249_RS04120 0.59 -0.4 857,100 - A4249_RS04120 0.59 -0.2 857,188 + A4249_RS04120 0.64 -0.1 857,188 + A4249_RS04120 0.64 -0.3 857,225 + A4249_RS04120 0.66 +0.1 857,225 + A4249_RS04120 0.66 -0.4 857,225 + A4249_RS04120 0.66 +0.3 857,226 - A4249_RS04120 0.66 -0.9 857,226 - A4249_RS04120 0.66 +0.4 857,226 - A4249_RS04120 0.66 -0.9 857,226 - A4249_RS04120 0.66 +0.5 857,319 - A4249_RS04120 0.72 +0.3 857,393 + A4249_RS04120 0.76 +0.5 857,393 + A4249_RS04120 0.76 -0.4 857,393 + A4249_RS04120 0.76 -0.2 857,393 + A4249_RS04120 0.76 +0.3 857,393 + A4249_RS04120 0.76 -0.4 857,393 + A4249_RS04120 0.76 +0.3 857,393 + A4249_RS04120 0.76 -0.1 857,393 + A4249_RS04120 0.76 +0.1 857,393 + A4249_RS04120 0.76 +0.3 857,394 - A4249_RS04120 0.76 +0.4 857,394 - A4249_RS04120 0.76 -1.0 857,394 - A4249_RS04120 0.76 -0.8 857,429 + A4249_RS04120 0.79 -0.8 857,429 + A4249_RS04120 0.79 -1.0 857,430 - A4249_RS04120 0.79 +0.1 857,430 - A4249_RS04120 0.79 -1.4 857,430 - A4249_RS04120 0.79 -0.2 857,438 + A4249_RS04120 0.79 +0.3 857,438 + A4249_RS04120 0.79 -0.0 857,439 - A4249_RS04120 0.79 +0.2 857,492 + A4249_RS04120 0.82 -1.0 857,493 - A4249_RS04120 0.82 -0.7 857,493 - A4249_RS04120 0.82 +0.2 857,503 + A4249_RS04120 0.83 -0.4 857,736 + +0.1 857,736 + -1.5 857,736 + -0.7 857,736 + +0.5 857,737 - -0.2 857,737 - -0.3 857,737 - -0.3 857,737 - +0.2 857,737 - +0.2 857,737 - -0.4 858,035 + A4249_RS04125 0.20 +1.2 858,035 + A4249_RS04125 0.20 +0.2 858,035 + A4249_RS04125 0.20 -0.9 858,036 - A4249_RS04125 0.20 -0.5 858,036 - A4249_RS04125 0.20 -1.0 858,036 - A4249_RS04125 0.20 +0.1 858,036 - A4249_RS04125 0.20 -0.5 858,036 - A4249_RS04125 0.20 +0.7 858,245 + A4249_RS04125 0.42 -1.0
Or see this region's nucleotide sequence