Experiment: Adenine 0.74 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS04070 and A4249_RS04075 are separated by 19 nucleotides A4249_RS04075 and A4249_RS04080 are separated by 25 nucleotides A4249_RS04080 and A4249_RS04085 are separated by 59 nucleotides
A4249_RS04070: A4249_RS04070 - hypothetical protein, at 843,363 to 845,084
_RS04070
A4249_RS04075: A4249_RS04075 - thioredoxin domain-containing protein, at 845,104 to 845,883
_RS04075
A4249_RS04080: A4249_RS04080 - M48 family metalloprotease, at 845,909 to 847,309
_RS04080
A4249_RS04085: A4249_RS04085 - ribonuclease E/G, at 847,369 to 850,071
_RS04085
Position (kb) 845
846
847
848 Strain fitness (log2 ratio) -2
-1
0
1 at 844.962 kb on + strand at 844.963 kb on - strand at 844.968 kb on + strand at 844.968 kb on + strand at 844.968 kb on + strand at 844.968 kb on + strand at 844.968 kb on + strand at 844.968 kb on + strand at 844.968 kb on + strand at 844.968 kb on + strand at 844.968 kb on + strand at 844.968 kb on + strand at 844.968 kb on + strand at 844.968 kb on + strand at 844.968 kb on + strand at 844.969 kb on - strand at 844.969 kb on - strand at 844.969 kb on - strand at 844.969 kb on - strand at 844.969 kb on - strand at 844.969 kb on - strand at 844.969 kb on - strand at 844.969 kb on - strand at 844.969 kb on - strand at 844.969 kb on - strand at 844.969 kb on - strand at 844.969 kb on - strand at 844.971 kb on + strand at 844.971 kb on + strand at 844.971 kb on + strand at 844.971 kb on + strand at 844.971 kb on + strand at 844.971 kb on + strand at 844.971 kb on + strand at 844.971 kb on + strand at 844.971 kb on + strand at 844.971 kb on + strand at 844.971 kb on + strand at 844.971 kb on + strand at 844.971 kb on + strand at 844.971 kb on + strand at 844.972 kb on - strand at 844.972 kb on - strand at 844.972 kb on - strand at 844.972 kb on - strand at 844.972 kb on - strand at 844.972 kb on - strand at 844.972 kb on - strand at 844.972 kb on - strand at 844.972 kb on - strand at 844.972 kb on - strand at 845.357 kb on + strand, within A4249_RS04075 at 845.357 kb on + strand, within A4249_RS04075 at 845.357 kb on + strand, within A4249_RS04075 at 845.357 kb on + strand, within A4249_RS04075 at 845.357 kb on + strand, within A4249_RS04075 at 845.357 kb on + strand, within A4249_RS04075 at 845.358 kb on - strand, within A4249_RS04075 at 845.358 kb on - strand, within A4249_RS04075 at 845.358 kb on - strand, within A4249_RS04075 at 845.358 kb on - strand, within A4249_RS04075 at 845.358 kb on - strand, within A4249_RS04075 at 845.358 kb on - strand, within A4249_RS04075 at 845.358 kb on - strand, within A4249_RS04075 at 845.369 kb on + strand, within A4249_RS04075 at 845.369 kb on + strand, within A4249_RS04075 at 845.369 kb on + strand, within A4249_RS04075 at 845.369 kb on + strand, within A4249_RS04075 at 845.369 kb on + strand, within A4249_RS04075 at 845.369 kb on + strand, within A4249_RS04075 at 845.370 kb on - strand, within A4249_RS04075 at 845.370 kb on - strand, within A4249_RS04075 at 845.370 kb on - strand, within A4249_RS04075 at 845.370 kb on - strand, within A4249_RS04075 at 845.370 kb on - strand, within A4249_RS04075 at 845.370 kb on - strand, within A4249_RS04075 at 845.370 kb on - strand, within A4249_RS04075 at 845.370 kb on - strand, within A4249_RS04075 at 845.411 kb on + strand, within A4249_RS04075 at 845.411 kb on + strand, within A4249_RS04075 at 845.411 kb on + strand, within A4249_RS04075 at 845.411 kb on + strand, within A4249_RS04075 at 845.411 kb on + strand, within A4249_RS04075 at 845.412 kb on - strand, within A4249_RS04075 at 845.412 kb on - strand, within A4249_RS04075 at 845.412 kb on - strand, within A4249_RS04075 at 845.412 kb on - strand, within A4249_RS04075 at 845.501 kb on + strand, within A4249_RS04075 at 845.502 kb on - strand, within A4249_RS04075 at 845.723 kb on + strand, within A4249_RS04075 at 845.723 kb on + strand, within A4249_RS04075 at 845.723 kb on + strand, within A4249_RS04075 at 845.723 kb on + strand, within A4249_RS04075 at 845.724 kb on - strand, within A4249_RS04075 at 845.724 kb on - strand, within A4249_RS04075 at 845.724 kb on - strand, within A4249_RS04075 at 845.724 kb on - strand, within A4249_RS04075 at 845.724 kb on - strand, within A4249_RS04075 at 845.753 kb on + strand, within A4249_RS04075 at 845.754 kb on - strand, within A4249_RS04075 at 845.754 kb on - strand, within A4249_RS04075 at 845.754 kb on - strand, within A4249_RS04075 at 845.804 kb on + strand, within A4249_RS04075 at 845.805 kb on - strand, within A4249_RS04075 at 845.902 kb on + strand at 845.903 kb on - strand at 845.903 kb on - strand at 846.093 kb on + strand, within A4249_RS04080 at 846.096 kb on + strand, within A4249_RS04080 at 846.097 kb on - strand, within A4249_RS04080 at 846.144 kb on + strand, within A4249_RS04080 at 846.144 kb on + strand, within A4249_RS04080 at 846.584 kb on - strand, within A4249_RS04080 at 846.609 kb on + strand, within A4249_RS04080 at 846.610 kb on - strand, within A4249_RS04080 at 846.631 kb on - strand, within A4249_RS04080 at 846.681 kb on + strand, within A4249_RS04080 at 846.682 kb on - strand, within A4249_RS04080 at 846.822 kb on + strand, within A4249_RS04080 at 846.822 kb on + strand, within A4249_RS04080 at 846.822 kb on + strand, within A4249_RS04080 at 846.822 kb on + strand, within A4249_RS04080 at 846.823 kb on - strand, within A4249_RS04080 at 846.823 kb on - strand, within A4249_RS04080 at 846.823 kb on - strand, within A4249_RS04080 at 846.823 kb on - strand, within A4249_RS04080 at 846.850 kb on - strand, within A4249_RS04080 at 846.850 kb on - strand, within A4249_RS04080 at 847.315 kb on + strand at 847.315 kb on + strand at 847.316 kb on - strand at 847.344 kb on - strand at 847.356 kb on + strand at 847.356 kb on + strand at 847.356 kb on + strand at 847.356 kb on + strand at 847.356 kb on + strand at 847.356 kb on + strand at 847.357 kb on - strand at 847.357 kb on - strand at 847.357 kb on - strand at 847.357 kb on - strand at 847.357 kb on - strand at 847.357 kb on - strand at 847.357 kb on - strand at 848.039 kb on + strand, within A4249_RS04085 at 848.039 kb on + strand, within A4249_RS04085 at 848.039 kb on + strand, within A4249_RS04085 at 848.039 kb on + strand, within A4249_RS04085 at 848.040 kb on - strand, within A4249_RS04085 at 848.040 kb on - strand, within A4249_RS04085 at 848.040 kb on - strand, within A4249_RS04085 at 848.040 kb on - strand, within A4249_RS04085 at 848.040 kb on - strand, within A4249_RS04085 at 848.081 kb on + strand, within A4249_RS04085 at 848.081 kb on + strand, within A4249_RS04085 at 848.082 kb on - strand, within A4249_RS04085
Per-strain Table
Position Strand Gene LocusTag Fraction Adenine 0.74 mM (C) remove 844,962 + -0.1 844,963 - -1.2 844,968 + -0.3 844,968 + -0.2 844,968 + -0.2 844,968 + -0.1 844,968 + -0.3 844,968 + -0.4 844,968 + -0.0 844,968 + -0.1 844,968 + +0.4 844,968 + -0.4 844,968 + +0.7 844,968 + -0.5 844,968 + +0.1 844,969 - +0.2 844,969 - -0.2 844,969 - -0.0 844,969 - +0.3 844,969 - +0.1 844,969 - -0.7 844,969 - +0.4 844,969 - -0.0 844,969 - +0.4 844,969 - +0.1 844,969 - +1.0 844,969 - +0.1 844,971 + -0.1 844,971 + -0.3 844,971 + +0.1 844,971 + -0.3 844,971 + -0.4 844,971 + -0.1 844,971 + -0.9 844,971 + -0.5 844,971 + +1.1 844,971 + +0.4 844,971 + +0.0 844,971 + -0.2 844,971 + +0.9 844,971 + -1.0 844,972 - +0.4 844,972 - -0.4 844,972 - +0.3 844,972 - -0.0 844,972 - -0.8 844,972 - -1.4 844,972 - -1.0 844,972 - +0.6 844,972 - +0.0 844,972 - -0.6 845,357 + A4249_RS04075 0.32 -0.5 845,357 + A4249_RS04075 0.32 -0.4 845,357 + A4249_RS04075 0.32 -0.1 845,357 + A4249_RS04075 0.32 -0.3 845,357 + A4249_RS04075 0.32 -0.3 845,357 + A4249_RS04075 0.32 -0.3 845,358 - A4249_RS04075 0.33 -0.2 845,358 - A4249_RS04075 0.33 +0.0 845,358 - A4249_RS04075 0.33 -0.0 845,358 - A4249_RS04075 0.33 +0.4 845,358 - A4249_RS04075 0.33 +0.1 845,358 - A4249_RS04075 0.33 -0.3 845,358 - A4249_RS04075 0.33 -0.8 845,369 + A4249_RS04075 0.34 -0.0 845,369 + A4249_RS04075 0.34 +0.3 845,369 + A4249_RS04075 0.34 +0.7 845,369 + A4249_RS04075 0.34 +0.4 845,369 + A4249_RS04075 0.34 +0.1 845,369 + A4249_RS04075 0.34 -0.1 845,370 - A4249_RS04075 0.34 +0.2 845,370 - A4249_RS04075 0.34 -1.0 845,370 - A4249_RS04075 0.34 -2.5 845,370 - A4249_RS04075 0.34 +0.5 845,370 - A4249_RS04075 0.34 +1.0 845,370 - A4249_RS04075 0.34 -0.1 845,370 - A4249_RS04075 0.34 +0.4 845,370 - A4249_RS04075 0.34 -0.2 845,411 + A4249_RS04075 0.39 +0.1 845,411 + A4249_RS04075 0.39 -0.7 845,411 + A4249_RS04075 0.39 +0.1 845,411 + A4249_RS04075 0.39 +0.0 845,411 + A4249_RS04075 0.39 +0.3 845,412 - A4249_RS04075 0.39 +0.9 845,412 - A4249_RS04075 0.39 +0.2 845,412 - A4249_RS04075 0.39 -0.8 845,412 - A4249_RS04075 0.39 -1.2 845,501 + A4249_RS04075 0.51 +0.3 845,502 - A4249_RS04075 0.51 -0.6 845,723 + A4249_RS04075 0.79 +0.2 845,723 + A4249_RS04075 0.79 +0.5 845,723 + A4249_RS04075 0.79 -0.0 845,723 + A4249_RS04075 0.79 -0.8 845,724 - A4249_RS04075 0.79 +0.7 845,724 - A4249_RS04075 0.79 -0.2 845,724 - A4249_RS04075 0.79 -0.4 845,724 - A4249_RS04075 0.79 +0.3 845,724 - A4249_RS04075 0.79 -0.1 845,753 + A4249_RS04075 0.83 -0.4 845,754 - A4249_RS04075 0.83 -0.1 845,754 - A4249_RS04075 0.83 +0.0 845,754 - A4249_RS04075 0.83 -0.4 845,804 + A4249_RS04075 0.90 -1.5 845,805 - A4249_RS04075 0.90 -1.1 845,902 + -0.5 845,903 - -0.6 845,903 - +0.3 846,093 + A4249_RS04080 0.13 -1.0 846,096 + A4249_RS04080 0.13 -1.0 846,097 - A4249_RS04080 0.13 -1.7 846,144 + A4249_RS04080 0.17 -1.5 846,144 + A4249_RS04080 0.17 -1.0 846,584 - A4249_RS04080 0.48 -1.2 846,609 + A4249_RS04080 0.50 -1.8 846,610 - A4249_RS04080 0.50 -1.2 846,631 - A4249_RS04080 0.52 -0.2 846,681 + A4249_RS04080 0.55 -0.0 846,682 - A4249_RS04080 0.55 -1.7 846,822 + A4249_RS04080 0.65 -1.0 846,822 + A4249_RS04080 0.65 -0.2 846,822 + A4249_RS04080 0.65 -2.0 846,822 + A4249_RS04080 0.65 -1.2 846,823 - A4249_RS04080 0.65 -0.2 846,823 - A4249_RS04080 0.65 +0.6 846,823 - A4249_RS04080 0.65 -1.8 846,823 - A4249_RS04080 0.65 +1.5 846,850 - A4249_RS04080 0.67 +0.8 846,850 - A4249_RS04080 0.67 -0.9 847,315 + -0.6 847,315 + -0.3 847,316 - -0.7 847,344 - +0.8 847,356 + +0.5 847,356 + -1.9 847,356 + -1.1 847,356 + -0.1 847,356 + -0.2 847,356 + -0.0 847,357 - -0.5 847,357 - +0.6 847,357 - +0.1 847,357 - -1.1 847,357 - +0.5 847,357 - +0.3 847,357 - -0.0 848,039 + A4249_RS04085 0.25 +0.2 848,039 + A4249_RS04085 0.25 -0.1 848,039 + A4249_RS04085 0.25 -1.0 848,039 + A4249_RS04085 0.25 -1.4 848,040 - A4249_RS04085 0.25 -0.7 848,040 - A4249_RS04085 0.25 +1.1 848,040 - A4249_RS04085 0.25 +0.3 848,040 - A4249_RS04085 0.25 +0.6 848,040 - A4249_RS04085 0.25 +0.6 848,081 + A4249_RS04085 0.26 -0.0 848,081 + A4249_RS04085 0.26 -1.0 848,082 - A4249_RS04085 0.26 +0.8
Or see this region's nucleotide sequence