Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS03655

Experiment: Adenine 0.74 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS03650 and A4249_RS03655 are separated by 372 nucleotidesA4249_RS03655 and A4249_RS03660 are separated by 91 nucleotides A4249_RS03650: A4249_RS03650 - hypothetical protein, at 772,563 to 773,279 _RS03650 A4249_RS03655: A4249_RS03655 - winged helix-turn-helix domain-containing protein, at 773,652 to 774,587 _RS03655 A4249_RS03660: A4249_RS03660 - PAS domain-containing sensor histidine kinase, at 774,679 to 775,686 _RS03660 Position (kb) 773 774 775Strain fitness (log2 ratio) -2 -1 0 1 2at 772.746 kb on + strand, within A4249_RS03650at 772.746 kb on + strand, within A4249_RS03650at 772.747 kb on - strand, within A4249_RS03650at 772.747 kb on - strand, within A4249_RS03650at 772.747 kb on - strand, within A4249_RS03650at 772.747 kb on - strand, within A4249_RS03650at 772.747 kb on - strand, within A4249_RS03650at 772.747 kb on - strand, within A4249_RS03650at 772.747 kb on - strand, within A4249_RS03650at 772.747 kb on - strand, within A4249_RS03650at 772.747 kb on - strand, within A4249_RS03650at 772.747 kb on - strand, within A4249_RS03650at 772.747 kb on - strand, within A4249_RS03650at 772.806 kb on + strand, within A4249_RS03650at 772.806 kb on + strand, within A4249_RS03650at 772.806 kb on + strand, within A4249_RS03650at 772.806 kb on + strand, within A4249_RS03650at 772.806 kb on + strand, within A4249_RS03650at 772.807 kb on - strand, within A4249_RS03650at 772.935 kb on + strand, within A4249_RS03650at 772.936 kb on - strand, within A4249_RS03650at 772.936 kb on - strand, within A4249_RS03650at 772.936 kb on - strand, within A4249_RS03650at 773.020 kb on - strand, within A4249_RS03650at 773.020 kb on - strand, within A4249_RS03650at 773.069 kb on + strand, within A4249_RS03650at 773.070 kb on - strand, within A4249_RS03650at 773.070 kb on - strand, within A4249_RS03650at 773.237 kb on + strandat 773.238 kb on - strandat 773.238 kb on - strandat 773.238 kb on - strandat 773.238 kb on - strandat 773.305 kb on + strandat 773.305 kb on + strandat 773.305 kb on + strandat 773.305 kb on + strandat 773.305 kb on + strandat 773.306 kb on - strandat 773.306 kb on - strandat 773.306 kb on - strandat 773.306 kb on - strandat 773.306 kb on - strandat 773.306 kb on - strandat 773.314 kb on + strandat 773.314 kb on + strandat 773.315 kb on - strandat 773.429 kb on + strandat 773.429 kb on + strandat 773.429 kb on + strandat 773.430 kb on - strandat 773.430 kb on - strandat 773.430 kb on - strandat 773.430 kb on - strandat 773.430 kb on - strandat 773.430 kb on - strandat 773.430 kb on - strandat 773.430 kb on - strandat 773.430 kb on - strandat 773.490 kb on - strandat 773.490 kb on - strandat 773.665 kb on + strandat 773.665 kb on + strandat 773.665 kb on + strandat 773.693 kb on + strandat 773.693 kb on + strandat 773.753 kb on - strand, within A4249_RS03655at 773.872 kb on + strand, within A4249_RS03655at 773.872 kb on + strand, within A4249_RS03655at 773.872 kb on + strand, within A4249_RS03655at 773.872 kb on + strand, within A4249_RS03655at 773.872 kb on + strand, within A4249_RS03655at 773.872 kb on + strand, within A4249_RS03655at 773.873 kb on - strand, within A4249_RS03655at 773.873 kb on - strand, within A4249_RS03655at 773.873 kb on - strand, within A4249_RS03655at 773.924 kb on + strand, within A4249_RS03655at 773.924 kb on + strand, within A4249_RS03655at 773.924 kb on + strand, within A4249_RS03655at 773.925 kb on - strand, within A4249_RS03655at 773.925 kb on - strand, within A4249_RS03655at 774.228 kb on + strand, within A4249_RS03655at 774.228 kb on + strand, within A4249_RS03655at 774.228 kb on + strand, within A4249_RS03655at 774.228 kb on + strand, within A4249_RS03655at 774.228 kb on + strand, within A4249_RS03655at 774.229 kb on - strand, within A4249_RS03655at 774.229 kb on - strand, within A4249_RS03655at 774.229 kb on - strand, within A4249_RS03655at 774.229 kb on - strand, within A4249_RS03655at 774.229 kb on - strand, within A4249_RS03655at 774.229 kb on - strand, within A4249_RS03655at 774.229 kb on - strand, within A4249_RS03655at 774.534 kb on + strandat 774.534 kb on + strandat 774.534 kb on + strandat 774.534 kb on + strandat 774.535 kb on - strandat 774.535 kb on - strandat 774.535 kb on - strandat 774.535 kb on - strandat 774.547 kb on + strandat 774.689 kb on + strandat 774.690 kb on + strandat 774.691 kb on - strandat 774.691 kb on - strandat 774.759 kb on + strandat 774.759 kb on + strandat 774.759 kb on + strandat 774.759 kb on + strandat 774.759 kb on + strandat 774.759 kb on + strandat 774.759 kb on + strandat 774.760 kb on - strandat 774.760 kb on - strandat 774.760 kb on - strandat 774.760 kb on - strandat 774.760 kb on - strandat 774.760 kb on - strandat 774.763 kb on + strandat 774.763 kb on + strandat 774.764 kb on - strandat 774.764 kb on - strandat 774.764 kb on - strandat 774.829 kb on + strand, within A4249_RS03660at 774.829 kb on + strand, within A4249_RS03660at 774.830 kb on - strand, within A4249_RS03660at 774.830 kb on - strand, within A4249_RS03660at 774.830 kb on - strand, within A4249_RS03660at 774.841 kb on + strand, within A4249_RS03660at 774.841 kb on + strand, within A4249_RS03660at 774.841 kb on + strand, within A4249_RS03660at 774.842 kb on - strand, within A4249_RS03660at 774.842 kb on - strand, within A4249_RS03660at 774.842 kb on - strand, within A4249_RS03660at 774.842 kb on - strand, within A4249_RS03660at 774.842 kb on - strand, within A4249_RS03660at 774.843 kb on + strand, within A4249_RS03660at 774.843 kb on + strand, within A4249_RS03660at 774.843 kb on + strand, within A4249_RS03660at 774.843 kb on + strand, within A4249_RS03660at 774.844 kb on - strand, within A4249_RS03660at 774.844 kb on - strand, within A4249_RS03660at 774.844 kb on - strand, within A4249_RS03660at 774.844 kb on - strand, within A4249_RS03660at 775.033 kb on + strand, within A4249_RS03660at 775.033 kb on + strand, within A4249_RS03660at 775.033 kb on + strand, within A4249_RS03660at 775.034 kb on - strand, within A4249_RS03660at 775.034 kb on - strand, within A4249_RS03660at 775.034 kb on - strand, within A4249_RS03660at 775.077 kb on + strand, within A4249_RS03660at 775.332 kb on + strand, within A4249_RS03660at 775.333 kb on - strand, within A4249_RS03660at 775.333 kb on - strand, within A4249_RS03660

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Per-strain Table

Position Strand Gene LocusTag Fraction Adenine 0.74 mM (C)
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772,746 + A4249_RS03650 0.26 +0.4
772,746 + A4249_RS03650 0.26 +0.6
772,747 - A4249_RS03650 0.26 -0.4
772,747 - A4249_RS03650 0.26 -0.6
772,747 - A4249_RS03650 0.26 -0.1
772,747 - A4249_RS03650 0.26 +0.0
772,747 - A4249_RS03650 0.26 +0.4
772,747 - A4249_RS03650 0.26 -0.6
772,747 - A4249_RS03650 0.26 +0.1
772,747 - A4249_RS03650 0.26 -0.2
772,747 - A4249_RS03650 0.26 -0.6
772,747 - A4249_RS03650 0.26 +0.9
772,747 - A4249_RS03650 0.26 -0.2
772,806 + A4249_RS03650 0.34 +1.2
772,806 + A4249_RS03650 0.34 +0.1
772,806 + A4249_RS03650 0.34 -0.0
772,806 + A4249_RS03650 0.34 -0.2
772,806 + A4249_RS03650 0.34 -0.7
772,807 - A4249_RS03650 0.34 +0.0
772,935 + A4249_RS03650 0.52 +0.3
772,936 - A4249_RS03650 0.52 +0.3
772,936 - A4249_RS03650 0.52 -0.3
772,936 - A4249_RS03650 0.52 +0.0
773,020 - A4249_RS03650 0.64 -0.4
773,020 - A4249_RS03650 0.64 +0.5
773,069 + A4249_RS03650 0.71 -0.1
773,070 - A4249_RS03650 0.71 +0.8
773,070 - A4249_RS03650 0.71 +0.2
773,237 + -0.4
773,238 - +0.5
773,238 - -1.4
773,238 - -0.8
773,238 - -0.0
773,305 + +0.8
773,305 + +0.3
773,305 + -0.1
773,305 + +0.3
773,305 + +0.1
773,306 - +1.1
773,306 - -1.4
773,306 - -0.1
773,306 - -0.4
773,306 - +0.1
773,306 - +0.4
773,314 + -0.2
773,314 + +0.1
773,315 - +1.0
773,429 + +0.0
773,429 + -0.5
773,429 + +0.5
773,430 - +0.2
773,430 - +0.5
773,430 - -0.4
773,430 - +0.6
773,430 - +0.3
773,430 - +0.5
773,430 - +0.3
773,430 - -0.0
773,430 - -1.1
773,490 - +0.3
773,490 - -1.8
773,665 + +0.3
773,665 + +0.2
773,665 + -1.9
773,693 + -0.3
773,693 + -0.2
773,753 - A4249_RS03655 0.11 -0.1
773,872 + A4249_RS03655 0.24 -0.2
773,872 + A4249_RS03655 0.24 -0.2
773,872 + A4249_RS03655 0.24 -0.5
773,872 + A4249_RS03655 0.24 +0.7
773,872 + A4249_RS03655 0.24 -0.2
773,872 + A4249_RS03655 0.24 +0.2
773,873 - A4249_RS03655 0.24 +0.0
773,873 - A4249_RS03655 0.24 +0.4
773,873 - A4249_RS03655 0.24 +0.3
773,924 + A4249_RS03655 0.29 -0.4
773,924 + A4249_RS03655 0.29 -0.7
773,924 + A4249_RS03655 0.29 -0.2
773,925 - A4249_RS03655 0.29 -0.6
773,925 - A4249_RS03655 0.29 -0.2
774,228 + A4249_RS03655 0.62 -0.2
774,228 + A4249_RS03655 0.62 -0.5
774,228 + A4249_RS03655 0.62 +1.4
774,228 + A4249_RS03655 0.62 +0.0
774,228 + A4249_RS03655 0.62 -0.1
774,229 - A4249_RS03655 0.62 -2.7
774,229 - A4249_RS03655 0.62 +0.1
774,229 - A4249_RS03655 0.62 -0.4
774,229 - A4249_RS03655 0.62 +0.2
774,229 - A4249_RS03655 0.62 -0.4
774,229 - A4249_RS03655 0.62 +0.2
774,229 - A4249_RS03655 0.62 +0.2
774,534 + +0.1
774,534 + +0.7
774,534 + +0.4
774,534 + -0.1
774,535 - +0.3
774,535 - -0.8
774,535 - +0.1
774,535 - -0.8
774,547 + +0.8
774,689 + -0.5
774,690 + -0.3
774,691 - +0.8
774,691 - -0.1
774,759 + -0.3
774,759 + +0.1
774,759 + +1.8
774,759 + -1.5
774,759 + -0.2
774,759 + +0.0
774,759 + -0.4
774,760 - -1.5
774,760 - +0.2
774,760 - -1.3
774,760 - -0.5
774,760 - -1.3
774,760 - -0.1
774,763 + -0.4
774,763 + -0.2
774,764 - -0.4
774,764 - -0.3
774,764 - -0.1
774,829 + A4249_RS03660 0.15 -0.8
774,829 + A4249_RS03660 0.15 -0.5
774,830 - A4249_RS03660 0.15 +0.0
774,830 - A4249_RS03660 0.15 -0.2
774,830 - A4249_RS03660 0.15 +0.5
774,841 + A4249_RS03660 0.16 -0.4
774,841 + A4249_RS03660 0.16 +0.2
774,841 + A4249_RS03660 0.16 -2.4
774,842 - A4249_RS03660 0.16 +0.2
774,842 - A4249_RS03660 0.16 +0.5
774,842 - A4249_RS03660 0.16 -1.4
774,842 - A4249_RS03660 0.16 +0.5
774,842 - A4249_RS03660 0.16 -0.0
774,843 + A4249_RS03660 0.16 -0.2
774,843 + A4249_RS03660 0.16 -0.1
774,843 + A4249_RS03660 0.16 +0.5
774,843 + A4249_RS03660 0.16 -0.1
774,844 - A4249_RS03660 0.16 -0.2
774,844 - A4249_RS03660 0.16 -0.5
774,844 - A4249_RS03660 0.16 -0.6
774,844 - A4249_RS03660 0.16 +1.1
775,033 + A4249_RS03660 0.35 -1.7
775,033 + A4249_RS03660 0.35 +0.6
775,033 + A4249_RS03660 0.35 -1.3
775,034 - A4249_RS03660 0.35 -0.2
775,034 - A4249_RS03660 0.35 -1.0
775,034 - A4249_RS03660 0.35 +0.4
775,077 + A4249_RS03660 0.39 +0.2
775,332 + A4249_RS03660 0.65 -0.6
775,333 - A4249_RS03660 0.65 +0.0
775,333 - A4249_RS03660 0.65 +0.5

Or see this region's nucleotide sequence