Experiment: Adenine 0.74 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS03415 and A4249_RS03420 are separated by 185 nucleotides A4249_RS03420 and A4249_RS03425 are separated by 21 nucleotides A4249_RS03425 and A4249_RS03430 are separated by 1 nucleotides A4249_RS03430 and A4249_RS03435 are separated by 184 nucleotides
A4249_RS03415: A4249_RS03415 - TetR/AcrR family transcriptional regulator, at 716,069 to 716,638
_RS03415
A4249_RS03420: A4249_RS03420 - alpha-ketoglutarate-dependent dioxygenase AlkB, at 716,824 to 717,408
_RS03420
A4249_RS03425: A4249_RS03425 - hypothetical protein, at 717,430 to 718,635
_RS03425
A4249_RS03430: A4249_RS03430 - exodeoxyribonuclease III, at 718,637 to 719,410
_RS03430
A4249_RS03435: A4249_RS03435 - plasmid stabilization protein, at 719,595 to 719,900
_RS03435
Position (kb) 717
718
719 Strain fitness (log2 ratio) -2
-1
0
1 at 716.484 kb on + strand, within A4249_RS03415 at 716.484 kb on + strand, within A4249_RS03415 at 716.485 kb on - strand, within A4249_RS03415 at 716.485 kb on - strand, within A4249_RS03415 at 716.527 kb on + strand, within A4249_RS03415 at 716.527 kb on + strand, within A4249_RS03415 at 716.527 kb on + strand, within A4249_RS03415 at 716.528 kb on - strand, within A4249_RS03415 at 716.602 kb on + strand at 716.638 kb on + strand at 716.638 kb on + strand at 716.638 kb on + strand at 716.638 kb on + strand at 716.639 kb on - strand at 716.639 kb on - strand at 716.639 kb on - strand at 716.639 kb on - strand at 716.639 kb on - strand at 716.647 kb on + strand at 716.647 kb on + strand at 716.647 kb on + strand at 716.647 kb on + strand at 716.647 kb on + strand at 716.647 kb on + strand at 716.647 kb on + strand at 716.647 kb on + strand at 716.647 kb on + strand at 716.647 kb on + strand at 716.647 kb on + strand at 716.648 kb on - strand at 716.648 kb on - strand at 716.648 kb on - strand at 716.648 kb on - strand at 716.648 kb on - strand at 716.648 kb on - strand at 716.648 kb on - strand at 716.648 kb on - strand at 716.648 kb on - strand at 716.648 kb on - strand at 716.663 kb on + strand at 716.663 kb on + strand at 716.663 kb on + strand at 716.663 kb on + strand at 716.663 kb on + strand at 716.663 kb on + strand at 716.663 kb on + strand at 716.663 kb on + strand at 716.663 kb on + strand at 716.663 kb on + strand at 716.664 kb on - strand at 716.664 kb on - strand at 716.664 kb on - strand at 716.664 kb on - strand at 716.664 kb on - strand at 716.664 kb on - strand at 716.664 kb on - strand at 716.664 kb on - strand at 716.664 kb on - strand at 716.667 kb on + strand at 716.667 kb on + strand at 716.667 kb on + strand at 716.667 kb on + strand at 716.667 kb on + strand at 716.667 kb on + strand at 716.667 kb on + strand at 716.667 kb on + strand at 716.667 kb on + strand at 716.668 kb on - strand at 716.668 kb on - strand at 716.668 kb on - strand at 716.668 kb on - strand at 716.668 kb on - strand at 716.668 kb on - strand at 716.668 kb on - strand at 716.668 kb on - strand at 716.825 kb on + strand at 716.825 kb on + strand at 716.918 kb on + strand, within A4249_RS03420 at 716.918 kb on + strand, within A4249_RS03420 at 716.918 kb on + strand, within A4249_RS03420 at 716.919 kb on - strand, within A4249_RS03420 at 716.919 kb on - strand, within A4249_RS03420 at 716.919 kb on - strand, within A4249_RS03420 at 716.919 kb on - strand, within A4249_RS03420 at 717.029 kb on + strand, within A4249_RS03420 at 717.029 kb on + strand, within A4249_RS03420 at 717.030 kb on - strand, within A4249_RS03420 at 717.030 kb on - strand, within A4249_RS03420 at 717.045 kb on + strand, within A4249_RS03420 at 717.046 kb on - strand, within A4249_RS03420 at 717.046 kb on - strand, within A4249_RS03420 at 717.074 kb on + strand, within A4249_RS03420 at 717.075 kb on - strand, within A4249_RS03420 at 717.075 kb on - strand, within A4249_RS03420 at 717.332 kb on + strand, within A4249_RS03420 at 717.333 kb on - strand, within A4249_RS03420 at 717.333 kb on - strand, within A4249_RS03420 at 717.461 kb on + strand at 717.674 kb on + strand, within A4249_RS03425 at 717.674 kb on + strand, within A4249_RS03425 at 717.674 kb on + strand, within A4249_RS03425 at 717.674 kb on + strand, within A4249_RS03425 at 717.674 kb on + strand, within A4249_RS03425 at 717.675 kb on - strand, within A4249_RS03425 at 718.130 kb on + strand, within A4249_RS03425 at 718.130 kb on + strand, within A4249_RS03425 at 718.130 kb on + strand, within A4249_RS03425 at 718.131 kb on - strand, within A4249_RS03425 at 718.131 kb on - strand, within A4249_RS03425 at 718.131 kb on - strand, within A4249_RS03425 at 718.131 kb on - strand, within A4249_RS03425 at 718.131 kb on - strand, within A4249_RS03425 at 718.131 kb on - strand, within A4249_RS03425 at 718.801 kb on - strand, within A4249_RS03430 at 718.801 kb on - strand, within A4249_RS03430 at 718.904 kb on + strand, within A4249_RS03430 at 718.904 kb on + strand, within A4249_RS03430 at 718.904 kb on + strand, within A4249_RS03430 at 718.905 kb on - strand, within A4249_RS03430 at 718.905 kb on - strand, within A4249_RS03430 at 718.905 kb on - strand, within A4249_RS03430 at 718.938 kb on + strand, within A4249_RS03430 at 718.938 kb on + strand, within A4249_RS03430 at 718.938 kb on + strand, within A4249_RS03430 at 718.938 kb on + strand, within A4249_RS03430 at 718.938 kb on + strand, within A4249_RS03430 at 718.938 kb on + strand, within A4249_RS03430 at 718.938 kb on + strand, within A4249_RS03430 at 718.938 kb on + strand, within A4249_RS03430 at 718.939 kb on - strand, within A4249_RS03430 at 718.939 kb on - strand, within A4249_RS03430 at 718.939 kb on - strand, within A4249_RS03430 at 718.939 kb on - strand, within A4249_RS03430 at 718.939 kb on - strand, within A4249_RS03430 at 718.939 kb on - strand, within A4249_RS03430 at 718.939 kb on - strand, within A4249_RS03430 at 718.939 kb on - strand, within A4249_RS03430 at 718.939 kb on - strand, within A4249_RS03430 at 718.939 kb on - strand, within A4249_RS03430 at 719.052 kb on + strand, within A4249_RS03430 at 719.052 kb on + strand, within A4249_RS03430 at 719.053 kb on - strand, within A4249_RS03430 at 719.053 kb on - strand, within A4249_RS03430 at 719.053 kb on - strand, within A4249_RS03430 at 719.094 kb on + strand, within A4249_RS03430 at 719.094 kb on + strand, within A4249_RS03430 at 719.094 kb on + strand, within A4249_RS03430 at 719.095 kb on - strand, within A4249_RS03430 at 719.136 kb on + strand, within A4249_RS03430 at 719.136 kb on + strand, within A4249_RS03430 at 719.137 kb on - strand, within A4249_RS03430 at 719.137 kb on - strand, within A4249_RS03430 at 719.137 kb on - strand, within A4249_RS03430 at 719.445 kb on + strand at 719.445 kb on + strand at 719.445 kb on + strand at 719.445 kb on + strand at 719.446 kb on - strand at 719.446 kb on - strand at 719.446 kb on - strand at 719.528 kb on + strand at 719.528 kb on + strand at 719.528 kb on + strand at 719.528 kb on + strand at 719.528 kb on + strand at 719.528 kb on + strand at 719.528 kb on + strand at 719.528 kb on + strand at 719.528 kb on + strand at 719.528 kb on + strand at 719.528 kb on + strand at 719.529 kb on - strand at 719.529 kb on - strand at 719.529 kb on - strand at 719.529 kb on - strand at 719.529 kb on - strand at 719.529 kb on - strand at 719.529 kb on - strand at 719.529 kb on - strand at 719.529 kb on - strand at 719.530 kb on + strand at 719.530 kb on + strand at 719.530 kb on + strand at 719.530 kb on + strand at 719.530 kb on + strand at 719.530 kb on + strand at 719.530 kb on + strand at 719.530 kb on + strand at 719.530 kb on + strand at 719.530 kb on + strand at 719.530 kb on + strand at 719.530 kb on + strand at 719.530 kb on + strand at 719.530 kb on + strand at 719.530 kb on + strand at 719.531 kb on - strand at 719.531 kb on - strand at 719.531 kb on - strand at 719.531 kb on - strand at 719.531 kb on - strand at 719.531 kb on - strand at 719.531 kb on - strand at 719.531 kb on - strand at 719.531 kb on - strand at 719.531 kb on - strand at 719.531 kb on - strand at 719.531 kb on - strand at 719.531 kb on - strand at 719.531 kb on - strand at 719.531 kb on - strand at 719.531 kb on - strand at 719.531 kb on - strand at 719.531 kb on - strand at 719.531 kb on - strand at 719.534 kb on + strand at 719.534 kb on + strand at 719.534 kb on + strand at 719.534 kb on + strand at 719.534 kb on + strand at 719.534 kb on + strand at 719.534 kb on + strand at 719.534 kb on + strand at 719.534 kb on + strand at 719.534 kb on + strand at 719.535 kb on - strand at 719.535 kb on - strand at 719.535 kb on - strand at 719.535 kb on - strand at 719.535 kb on - strand at 719.535 kb on - strand at 719.535 kb on - strand at 719.535 kb on - strand at 719.535 kb on - strand at 719.600 kb on + strand at 719.600 kb on + strand at 719.600 kb on + strand at 719.619 kb on + strand at 719.621 kb on + strand at 719.621 kb on + strand at 719.622 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Adenine 0.74 mM (C) remove 716,484 + A4249_RS03415 0.73 +0.2 716,484 + A4249_RS03415 0.73 -0.1 716,485 - A4249_RS03415 0.73 -0.5 716,485 - A4249_RS03415 0.73 -0.1 716,527 + A4249_RS03415 0.80 -0.3 716,527 + A4249_RS03415 0.80 -0.3 716,527 + A4249_RS03415 0.80 +0.3 716,528 - A4249_RS03415 0.81 -0.7 716,602 + -0.3 716,638 + +0.0 716,638 + -0.2 716,638 + +0.1 716,638 + -0.1 716,639 - +0.3 716,639 - -0.0 716,639 - +0.2 716,639 - +0.2 716,639 - +1.6 716,647 + -0.2 716,647 + -0.8 716,647 + -0.1 716,647 + -0.7 716,647 + -0.2 716,647 + -0.2 716,647 + +1.3 716,647 + -0.4 716,647 + +0.5 716,647 + -0.4 716,647 + -1.3 716,648 - -0.2 716,648 - +0.2 716,648 - +0.1 716,648 - -0.5 716,648 - -0.6 716,648 - -0.3 716,648 - +0.9 716,648 - +0.1 716,648 - +1.2 716,648 - -1.0 716,663 + -0.6 716,663 + +0.1 716,663 + +0.7 716,663 + +0.6 716,663 + -0.4 716,663 + -1.3 716,663 + -0.2 716,663 + -0.8 716,663 + -0.4 716,663 + +0.2 716,664 - +0.8 716,664 - +0.1 716,664 - +0.2 716,664 - -0.0 716,664 - +0.2 716,664 - -0.3 716,664 - -0.1 716,664 - -0.5 716,664 - +1.1 716,667 + -0.5 716,667 + -0.1 716,667 + -0.1 716,667 + -0.1 716,667 + -1.2 716,667 + -0.7 716,667 + +0.3 716,667 + -0.3 716,667 + +1.0 716,668 - -0.3 716,668 - -0.2 716,668 - +0.8 716,668 - +0.0 716,668 - +0.6 716,668 - -0.3 716,668 - -2.3 716,668 - -0.1 716,825 + +0.3 716,825 + +0.2 716,918 + A4249_RS03420 0.16 +0.2 716,918 + A4249_RS03420 0.16 -0.8 716,918 + A4249_RS03420 0.16 -2.4 716,919 - A4249_RS03420 0.16 -0.6 716,919 - A4249_RS03420 0.16 -0.6 716,919 - A4249_RS03420 0.16 -0.8 716,919 - A4249_RS03420 0.16 -0.3 717,029 + A4249_RS03420 0.35 -1.4 717,029 + A4249_RS03420 0.35 +0.8 717,030 - A4249_RS03420 0.35 -0.8 717,030 - A4249_RS03420 0.35 -2.2 717,045 + A4249_RS03420 0.38 +0.8 717,046 - A4249_RS03420 0.38 +0.3 717,046 - A4249_RS03420 0.38 -0.4 717,074 + A4249_RS03420 0.43 +0.5 717,075 - A4249_RS03420 0.43 -0.5 717,075 - A4249_RS03420 0.43 -0.1 717,332 + A4249_RS03420 0.87 -0.1 717,333 - A4249_RS03420 0.87 +0.2 717,333 - A4249_RS03420 0.87 +0.0 717,461 + +0.5 717,674 + A4249_RS03425 0.20 -0.7 717,674 + A4249_RS03425 0.20 -0.1 717,674 + A4249_RS03425 0.20 +0.5 717,674 + A4249_RS03425 0.20 +0.3 717,674 + A4249_RS03425 0.20 -0.0 717,675 - A4249_RS03425 0.20 -0.1 718,130 + A4249_RS03425 0.58 -0.9 718,130 + A4249_RS03425 0.58 -0.4 718,130 + A4249_RS03425 0.58 +0.6 718,131 - A4249_RS03425 0.58 -1.0 718,131 - A4249_RS03425 0.58 -0.7 718,131 - A4249_RS03425 0.58 -0.8 718,131 - A4249_RS03425 0.58 -0.3 718,131 - A4249_RS03425 0.58 -2.0 718,131 - A4249_RS03425 0.58 -0.2 718,801 - A4249_RS03430 0.21 +0.2 718,801 - A4249_RS03430 0.21 -0.2 718,904 + A4249_RS03430 0.34 +0.1 718,904 + A4249_RS03430 0.34 -0.8 718,904 + A4249_RS03430 0.34 -0.6 718,905 - A4249_RS03430 0.35 +1.0 718,905 - A4249_RS03430 0.35 +0.5 718,905 - A4249_RS03430 0.35 +0.1 718,938 + A4249_RS03430 0.39 -0.1 718,938 + A4249_RS03430 0.39 -0.5 718,938 + A4249_RS03430 0.39 +0.4 718,938 + A4249_RS03430 0.39 +0.6 718,938 + A4249_RS03430 0.39 -0.0 718,938 + A4249_RS03430 0.39 -0.2 718,938 + A4249_RS03430 0.39 +1.1 718,938 + A4249_RS03430 0.39 -0.7 718,939 - A4249_RS03430 0.39 -0.4 718,939 - A4249_RS03430 0.39 -0.0 718,939 - A4249_RS03430 0.39 -0.4 718,939 - A4249_RS03430 0.39 -0.1 718,939 - A4249_RS03430 0.39 +0.4 718,939 - A4249_RS03430 0.39 -0.1 718,939 - A4249_RS03430 0.39 -1.5 718,939 - A4249_RS03430 0.39 -0.7 718,939 - A4249_RS03430 0.39 -0.1 718,939 - A4249_RS03430 0.39 -1.0 719,052 + A4249_RS03430 0.54 -0.8 719,052 + A4249_RS03430 0.54 +0.5 719,053 - A4249_RS03430 0.54 -0.5 719,053 - A4249_RS03430 0.54 +0.1 719,053 - A4249_RS03430 0.54 +0.3 719,094 + A4249_RS03430 0.59 +0.6 719,094 + A4249_RS03430 0.59 -0.5 719,094 + A4249_RS03430 0.59 +0.6 719,095 - A4249_RS03430 0.59 +0.0 719,136 + A4249_RS03430 0.64 +0.3 719,136 + A4249_RS03430 0.64 -0.5 719,137 - A4249_RS03430 0.65 +0.2 719,137 - A4249_RS03430 0.65 +0.1 719,137 - A4249_RS03430 0.65 -0.2 719,445 + -2.2 719,445 + -0.2 719,445 + +0.7 719,445 + +0.8 719,446 - +0.1 719,446 - -0.6 719,446 - +0.1 719,528 + -0.9 719,528 + +0.1 719,528 + -0.4 719,528 + +0.7 719,528 + +0.3 719,528 + -1.7 719,528 + -0.4 719,528 + +0.1 719,528 + -1.6 719,528 + +0.6 719,528 + +0.3 719,529 - -0.2 719,529 - -0.1 719,529 - +0.6 719,529 - -0.6 719,529 - +1.3 719,529 - -0.6 719,529 - -0.2 719,529 - -0.3 719,529 - +0.7 719,530 + -0.8 719,530 + -0.5 719,530 + +0.0 719,530 + +0.3 719,530 + +0.3 719,530 + +0.1 719,530 + +0.4 719,530 + -0.2 719,530 + -0.5 719,530 + +0.6 719,530 + -0.4 719,530 + -0.3 719,530 + +0.6 719,530 + -0.1 719,530 + -0.3 719,531 - +0.7 719,531 - -0.3 719,531 - +0.8 719,531 - -0.8 719,531 - -0.1 719,531 - -0.0 719,531 - -0.1 719,531 - +0.0 719,531 - -0.1 719,531 - -1.0 719,531 - +0.1 719,531 - -0.0 719,531 - -0.6 719,531 - +0.9 719,531 - -0.1 719,531 - +0.4 719,531 - -0.2 719,531 - -0.3 719,531 - +0.0 719,534 + -2.4 719,534 + -0.6 719,534 + +0.2 719,534 + -0.1 719,534 + +1.0 719,534 + +0.1 719,534 + -0.1 719,534 + -0.3 719,534 + +1.0 719,534 + -0.1 719,535 - +0.9 719,535 - -0.2 719,535 - +0.3 719,535 - +1.2 719,535 - +0.2 719,535 - -0.2 719,535 - +0.1 719,535 - -0.1 719,535 - -0.5 719,600 + +0.1 719,600 + +0.4 719,600 + -0.9 719,619 + -1.9 719,621 + -0.2 719,621 + -0.5 719,622 - -0.9
Or see this region's nucleotide sequence