Experiment: Adenine 0.74 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS03295 and A4249_RS03300 are separated by 160 nucleotides A4249_RS03300 and A4249_RS03305 are separated by 25 nucleotides A4249_RS03305 and A4249_RS03310 are separated by 108 nucleotides
A4249_RS03295: A4249_RS03295 - HAD family hydrolase, at 695,018 to 695,755
_RS03295
A4249_RS03300: A4249_RS03300 - copper resistance protein CopC, at 695,916 to 696,326
_RS03300
A4249_RS03305: A4249_RS03305 - hypothetical protein, at 696,352 to 696,687
_RS03305
A4249_RS03310: A4249_RS03310 - RNA polymerase sigma factor, at 696,796 to 697,374
_RS03310
Position (kb) 695
696
697 Strain fitness (log2 ratio) -2
-1
0
1
2 at 695.465 kb on + strand, within A4249_RS03295 at 695.466 kb on - strand, within A4249_RS03295 at 695.639 kb on + strand, within A4249_RS03295 at 695.639 kb on + strand, within A4249_RS03295 at 695.639 kb on + strand, within A4249_RS03295 at 695.639 kb on + strand, within A4249_RS03295 at 695.639 kb on + strand, within A4249_RS03295 at 695.639 kb on + strand, within A4249_RS03295 at 695.639 kb on + strand, within A4249_RS03295 at 695.639 kb on + strand, within A4249_RS03295 at 695.639 kb on + strand, within A4249_RS03295 at 695.639 kb on + strand, within A4249_RS03295 at 695.639 kb on + strand, within A4249_RS03295 at 695.639 kb on + strand, within A4249_RS03295 at 695.639 kb on + strand, within A4249_RS03295 at 695.640 kb on - strand, within A4249_RS03295 at 695.640 kb on - strand, within A4249_RS03295 at 695.640 kb on - strand, within A4249_RS03295 at 695.640 kb on - strand, within A4249_RS03295 at 695.640 kb on - strand, within A4249_RS03295 at 695.640 kb on - strand, within A4249_RS03295 at 695.640 kb on - strand, within A4249_RS03295 at 695.640 kb on - strand, within A4249_RS03295 at 695.640 kb on - strand, within A4249_RS03295 at 695.791 kb on + strand at 695.989 kb on + strand, within A4249_RS03300 at 695.989 kb on + strand, within A4249_RS03300 at 695.990 kb on - strand, within A4249_RS03300 at 695.990 kb on - strand, within A4249_RS03300 at 696.312 kb on + strand at 696.313 kb on - strand at 696.313 kb on - strand at 696.353 kb on + strand at 696.353 kb on + strand at 696.353 kb on + strand at 696.353 kb on + strand at 696.354 kb on - strand at 696.354 kb on - strand at 696.354 kb on - strand at 696.703 kb on + strand at 696.703 kb on + strand at 696.703 kb on + strand at 696.703 kb on + strand at 696.704 kb on - strand at 696.704 kb on - strand at 696.723 kb on - strand at 696.723 kb on - strand at 696.723 kb on - strand at 696.723 kb on - strand at 696.723 kb on - strand at 696.742 kb on + strand at 696.742 kb on + strand at 696.742 kb on + strand at 696.743 kb on - strand at 696.750 kb on + strand at 697.150 kb on + strand, within A4249_RS03310 at 697.151 kb on - strand, within A4249_RS03310 at 697.151 kb on - strand, within A4249_RS03310 at 697.151 kb on - strand, within A4249_RS03310 at 697.190 kb on + strand, within A4249_RS03310 at 697.220 kb on + strand, within A4249_RS03310 at 697.220 kb on + strand, within A4249_RS03310 at 697.220 kb on + strand, within A4249_RS03310 at 697.220 kb on + strand, within A4249_RS03310 at 697.220 kb on + strand, within A4249_RS03310 at 697.220 kb on + strand, within A4249_RS03310 at 697.220 kb on + strand, within A4249_RS03310 at 697.220 kb on + strand, within A4249_RS03310 at 697.221 kb on - strand, within A4249_RS03310 at 697.221 kb on - strand, within A4249_RS03310 at 697.221 kb on - strand, within A4249_RS03310 at 697.221 kb on - strand, within A4249_RS03310 at 697.221 kb on - strand, within A4249_RS03310 at 697.221 kb on - strand, within A4249_RS03310 at 697.221 kb on - strand, within A4249_RS03310 at 697.265 kb on + strand, within A4249_RS03310 at 697.266 kb on - strand, within A4249_RS03310 at 697.266 kb on - strand, within A4249_RS03310 at 697.266 kb on - strand, within A4249_RS03310
Per-strain Table
Position Strand Gene LocusTag Fraction Adenine 0.74 mM (C) remove 695,465 + A4249_RS03295 0.61 -2.2 695,466 - A4249_RS03295 0.61 +0.3 695,639 + A4249_RS03295 0.84 -0.2 695,639 + A4249_RS03295 0.84 +0.4 695,639 + A4249_RS03295 0.84 +0.4 695,639 + A4249_RS03295 0.84 -0.6 695,639 + A4249_RS03295 0.84 -0.8 695,639 + A4249_RS03295 0.84 -1.1 695,639 + A4249_RS03295 0.84 -0.2 695,639 + A4249_RS03295 0.84 -0.1 695,639 + A4249_RS03295 0.84 +0.7 695,639 + A4249_RS03295 0.84 +0.1 695,639 + A4249_RS03295 0.84 -0.1 695,639 + A4249_RS03295 0.84 +1.5 695,639 + A4249_RS03295 0.84 +0.1 695,640 - A4249_RS03295 0.84 -0.3 695,640 - A4249_RS03295 0.84 -0.1 695,640 - A4249_RS03295 0.84 +1.8 695,640 - A4249_RS03295 0.84 +0.1 695,640 - A4249_RS03295 0.84 -0.6 695,640 - A4249_RS03295 0.84 -1.3 695,640 - A4249_RS03295 0.84 -0.1 695,640 - A4249_RS03295 0.84 -0.8 695,640 - A4249_RS03295 0.84 -0.8 695,791 + -0.2 695,989 + A4249_RS03300 0.18 +0.2 695,989 + A4249_RS03300 0.18 -0.9 695,990 - A4249_RS03300 0.18 +0.1 695,990 - A4249_RS03300 0.18 -0.6 696,312 + +0.1 696,313 - -0.0 696,313 - -0.7 696,353 + -0.2 696,353 + -0.3 696,353 + +0.1 696,353 + -0.4 696,354 - -0.3 696,354 - -0.3 696,354 - -0.1 696,703 + +0.0 696,703 + +0.3 696,703 + -0.9 696,703 + -0.8 696,704 - +0.2 696,704 - -0.1 696,723 - +0.2 696,723 - -0.6 696,723 - +1.5 696,723 - +0.0 696,723 - -0.1 696,742 + +0.0 696,742 + -0.3 696,742 + -0.2 696,743 - -0.2 696,750 + +2.4 697,150 + A4249_RS03310 0.61 +0.6 697,151 - A4249_RS03310 0.61 +0.6 697,151 - A4249_RS03310 0.61 -0.9 697,151 - A4249_RS03310 0.61 -1.0 697,190 + A4249_RS03310 0.68 -0.5 697,220 + A4249_RS03310 0.73 -0.5 697,220 + A4249_RS03310 0.73 +0.0 697,220 + A4249_RS03310 0.73 -0.4 697,220 + A4249_RS03310 0.73 -1.1 697,220 + A4249_RS03310 0.73 +1.1 697,220 + A4249_RS03310 0.73 -1.2 697,220 + A4249_RS03310 0.73 -0.3 697,220 + A4249_RS03310 0.73 -0.1 697,221 - A4249_RS03310 0.73 -0.8 697,221 - A4249_RS03310 0.73 +1.1 697,221 - A4249_RS03310 0.73 +0.2 697,221 - A4249_RS03310 0.73 -0.7 697,221 - A4249_RS03310 0.73 -0.0 697,221 - A4249_RS03310 0.73 +0.6 697,221 - A4249_RS03310 0.73 -0.9 697,265 + A4249_RS03310 0.81 +1.8 697,266 - A4249_RS03310 0.81 -0.6 697,266 - A4249_RS03310 0.81 -0.2 697,266 - A4249_RS03310 0.81 +0.3
Or see this region's nucleotide sequence