Experiment: Adenine 0.74 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS03220 and A4249_RS03225 are separated by 211 nucleotides
A4249_RS03220: A4249_RS03220 - TonB-dependent receptor, at 674,885 to 677,869
_RS03220
A4249_RS03225: A4249_RS03225 - hypothetical protein, at 678,081 to 678,317
_RS03225
Position (kb) 678
679 Strain fitness (log2 ratio) -2
-1
0
1 at 677.190 kb on + strand, within A4249_RS03220 at 677.190 kb on + strand, within A4249_RS03220 at 677.190 kb on + strand, within A4249_RS03220 at 677.190 kb on + strand, within A4249_RS03220 at 677.191 kb on - strand, within A4249_RS03220 at 677.191 kb on - strand, within A4249_RS03220 at 677.191 kb on - strand, within A4249_RS03220 at 677.191 kb on - strand, within A4249_RS03220 at 677.303 kb on + strand, within A4249_RS03220 at 677.303 kb on + strand, within A4249_RS03220 at 677.303 kb on + strand, within A4249_RS03220 at 677.303 kb on + strand, within A4249_RS03220 at 677.303 kb on + strand, within A4249_RS03220 at 677.304 kb on - strand, within A4249_RS03220 at 677.304 kb on - strand, within A4249_RS03220 at 677.304 kb on - strand, within A4249_RS03220 at 677.304 kb on - strand, within A4249_RS03220 at 677.371 kb on - strand, within A4249_RS03220 at 677.371 kb on - strand, within A4249_RS03220 at 677.557 kb on + strand, within A4249_RS03220 at 677.557 kb on + strand, within A4249_RS03220 at 677.558 kb on - strand, within A4249_RS03220 at 677.679 kb on + strand at 677.679 kb on + strand at 677.679 kb on + strand at 677.679 kb on + strand at 677.679 kb on + strand at 677.679 kb on + strand at 677.679 kb on + strand at 677.679 kb on + strand at 677.679 kb on + strand at 677.680 kb on - strand at 677.680 kb on - strand at 677.680 kb on - strand at 677.680 kb on - strand at 677.680 kb on - strand at 677.680 kb on - strand at 677.680 kb on - strand at 677.680 kb on - strand at 677.680 kb on - strand at 677.680 kb on - strand at 677.680 kb on - strand at 677.680 kb on - strand at 677.680 kb on - strand at 677.680 kb on - strand at 677.680 kb on - strand at 677.680 kb on - strand at 677.680 kb on - strand at 677.860 kb on + strand at 677.860 kb on + strand at 677.860 kb on + strand at 677.860 kb on + strand at 677.861 kb on - strand at 677.921 kb on + strand at 677.947 kb on + strand at 677.947 kb on + strand at 677.947 kb on + strand at 677.947 kb on + strand at 677.947 kb on + strand at 677.947 kb on + strand at 677.947 kb on + strand at 677.947 kb on + strand at 677.947 kb on + strand at 677.948 kb on - strand at 677.948 kb on - strand at 677.948 kb on - strand at 677.948 kb on - strand at 677.948 kb on - strand at 677.948 kb on - strand at 677.948 kb on - strand at 677.948 kb on - strand at 678.082 kb on + strand at 678.083 kb on - strand at 678.090 kb on + strand at 678.090 kb on + strand at 678.090 kb on + strand at 678.090 kb on + strand at 678.091 kb on - strand at 678.119 kb on + strand, within A4249_RS03225 at 678.119 kb on + strand, within A4249_RS03225 at 678.119 kb on + strand, within A4249_RS03225 at 678.120 kb on - strand, within A4249_RS03225 at 678.120 kb on - strand, within A4249_RS03225 at 678.120 kb on - strand, within A4249_RS03225 at 678.182 kb on + strand, within A4249_RS03225 at 678.224 kb on - strand, within A4249_RS03225 at 678.362 kb on - strand at 678.440 kb on - strand at 678.551 kb on + strand at 678.551 kb on + strand at 678.552 kb on - strand at 678.559 kb on + strand at 678.559 kb on + strand at 678.559 kb on + strand at 678.560 kb on - strand at 678.560 kb on - strand at 678.560 kb on - strand at 678.560 kb on - strand at 678.560 kb on - strand at 678.609 kb on + strand at 678.609 kb on + strand at 678.609 kb on + strand at 678.609 kb on + strand at 678.610 kb on - strand at 678.610 kb on - strand at 678.610 kb on - strand at 678.610 kb on - strand at 678.610 kb on - strand at 678.610 kb on - strand at 678.746 kb on - strand at 678.855 kb on + strand at 678.896 kb on + strand at 678.897 kb on - strand at 678.897 kb on - strand at 678.903 kb on + strand at 678.903 kb on + strand at 678.945 kb on + strand at 678.946 kb on - strand at 678.962 kb on + strand at 678.962 kb on + strand at 678.962 kb on + strand at 678.962 kb on + strand at 678.962 kb on + strand at 678.962 kb on + strand at 678.963 kb on - strand at 679.001 kb on + strand at 679.001 kb on + strand at 679.058 kb on + strand at 679.058 kb on + strand at 679.059 kb on - strand at 679.059 kb on - strand at 679.059 kb on - strand at 679.168 kb on + strand at 679.168 kb on + strand at 679.168 kb on + strand at 679.168 kb on + strand at 679.168 kb on + strand at 679.168 kb on + strand at 679.168 kb on + strand at 679.168 kb on + strand at 679.168 kb on + strand at 679.168 kb on + strand at 679.168 kb on + strand at 679.168 kb on + strand at 679.168 kb on + strand at 679.168 kb on + strand at 679.168 kb on + strand at 679.168 kb on + strand at 679.168 kb on + strand at 679.169 kb on - strand at 679.169 kb on - strand at 679.169 kb on - strand at 679.169 kb on - strand at 679.169 kb on - strand at 679.169 kb on - strand at 679.169 kb on - strand at 679.169 kb on - strand at 679.169 kb on - strand at 679.169 kb on - strand at 679.169 kb on - strand at 679.169 kb on - strand at 679.169 kb on - strand at 679.169 kb on - strand at 679.211 kb on + strand at 679.211 kb on + strand at 679.212 kb on - strand at 679.212 kb on - strand at 679.317 kb on - strand at 679.317 kb on - strand at 679.317 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Adenine 0.74 mM (C) remove 677,190 + A4249_RS03220 0.77 +1.2 677,190 + A4249_RS03220 0.77 +0.1 677,190 + A4249_RS03220 0.77 +0.1 677,190 + A4249_RS03220 0.77 +1.5 677,191 - A4249_RS03220 0.77 +1.0 677,191 - A4249_RS03220 0.77 +0.8 677,191 - A4249_RS03220 0.77 +0.2 677,191 - A4249_RS03220 0.77 -0.4 677,303 + A4249_RS03220 0.81 -0.6 677,303 + A4249_RS03220 0.81 -0.1 677,303 + A4249_RS03220 0.81 -0.0 677,303 + A4249_RS03220 0.81 +1.2 677,303 + A4249_RS03220 0.81 -0.3 677,304 - A4249_RS03220 0.81 -0.2 677,304 - A4249_RS03220 0.81 -0.4 677,304 - A4249_RS03220 0.81 +0.6 677,304 - A4249_RS03220 0.81 -1.2 677,371 - A4249_RS03220 0.83 -0.3 677,371 - A4249_RS03220 0.83 -0.3 677,557 + A4249_RS03220 0.90 -0.2 677,557 + A4249_RS03220 0.90 +0.5 677,558 - A4249_RS03220 0.90 +0.7 677,679 + -1.4 677,679 + +0.3 677,679 + -1.6 677,679 + +0.4 677,679 + +0.3 677,679 + -0.1 677,679 + +0.1 677,679 + +0.4 677,679 + +0.3 677,680 - -1.0 677,680 - +0.1 677,680 - -0.2 677,680 - +0.1 677,680 - -0.8 677,680 - +0.3 677,680 - -0.3 677,680 - -1.1 677,680 - -0.0 677,680 - +0.2 677,680 - -0.3 677,680 - +0.4 677,680 - -0.2 677,680 - -0.4 677,680 - -0.7 677,680 - -0.2 677,680 - +0.2 677,860 + +0.3 677,860 + +0.2 677,860 + +0.2 677,860 + -0.2 677,861 - -0.8 677,921 + +0.0 677,947 + -0.6 677,947 + +0.2 677,947 + +0.6 677,947 + -0.2 677,947 + +0.4 677,947 + -0.1 677,947 + +0.2 677,947 + -0.1 677,947 + -0.2 677,948 - -0.1 677,948 - -0.5 677,948 - -0.0 677,948 - +0.0 677,948 - +0.5 677,948 - -0.4 677,948 - +0.4 677,948 - +0.9 678,082 + -0.6 678,083 - -0.5 678,090 + +1.0 678,090 + -0.0 678,090 + -0.3 678,090 + +0.2 678,091 - -1.7 678,119 + A4249_RS03225 0.16 -1.2 678,119 + A4249_RS03225 0.16 -0.0 678,119 + A4249_RS03225 0.16 -0.7 678,120 - A4249_RS03225 0.16 -0.7 678,120 - A4249_RS03225 0.16 -0.1 678,120 - A4249_RS03225 0.16 -0.2 678,182 + A4249_RS03225 0.43 -0.7 678,224 - A4249_RS03225 0.60 -0.0 678,362 - -0.6 678,440 - -1.7 678,551 + -0.9 678,551 + -0.2 678,552 - -0.6 678,559 + -0.1 678,559 + -0.6 678,559 + -0.1 678,560 - -0.2 678,560 - -0.4 678,560 - -0.2 678,560 - +0.3 678,560 - -0.5 678,609 + +1.2 678,609 + +0.7 678,609 + +0.3 678,609 + -0.4 678,610 - -0.6 678,610 - +0.2 678,610 - +0.5 678,610 - +0.6 678,610 - -0.1 678,610 - +0.9 678,746 - -0.4 678,855 + +0.8 678,896 + +1.2 678,897 - -0.6 678,897 - -1.1 678,903 + -0.3 678,903 + -0.7 678,945 + +0.0 678,946 - +0.6 678,962 + -0.4 678,962 + -1.4 678,962 + +1.3 678,962 + +0.0 678,962 + +0.4 678,962 + +0.2 678,963 - -0.0 679,001 + -0.1 679,001 + +0.7 679,058 + +0.4 679,058 + +0.1 679,059 - -0.0 679,059 - -0.4 679,059 - +0.5 679,168 + +0.8 679,168 + +0.3 679,168 + +0.5 679,168 + -0.4 679,168 + +0.4 679,168 + +0.2 679,168 + -0.1 679,168 + +1.1 679,168 + -0.2 679,168 + +0.6 679,168 + +0.1 679,168 + -0.2 679,168 + +1.2 679,168 + +0.3 679,168 + +0.0 679,168 + +0.2 679,168 + -0.1 679,169 - -0.2 679,169 - -0.0 679,169 - +0.0 679,169 - +0.6 679,169 - +0.3 679,169 - -1.4 679,169 - -0.1 679,169 - +0.4 679,169 - -0.0 679,169 - +0.2 679,169 - +0.2 679,169 - -0.7 679,169 - -0.1 679,169 - -0.1 679,211 + -0.1 679,211 + -0.0 679,212 - -0.3 679,212 - +0.5 679,317 - -2.0 679,317 - -0.3 679,317 - +0.7
Or see this region's nucleotide sequence