Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS02910

Experiment: Adenine 0.74 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS02905 and A4249_RS02910 are separated by 0 nucleotidesA4249_RS02910 and A4249_RS02915 are separated by 63 nucleotides A4249_RS02905: A4249_RS02905 - tRNA guanosine(34) transglycosylase Tgt, at 617,902 to 619,014 _RS02905 A4249_RS02910: A4249_RS02910 - hypothetical protein, at 619,015 to 619,488 _RS02910 A4249_RS02915: A4249_RS02915 - methyltransferase, at 619,552 to 620,310 _RS02915 Position (kb) 619 620Strain fitness (log2 ratio) -2 -1 0 1 2at 618.280 kb on + strand, within A4249_RS02905at 618.281 kb on - strand, within A4249_RS02905at 618.281 kb on - strand, within A4249_RS02905at 618.284 kb on + strand, within A4249_RS02905at 618.478 kb on - strand, within A4249_RS02905at 618.833 kb on + strand, within A4249_RS02905at 618.833 kb on + strand, within A4249_RS02905at 619.079 kb on + strand, within A4249_RS02910at 619.080 kb on - strand, within A4249_RS02910at 619.080 kb on - strand, within A4249_RS02910at 619.080 kb on - strand, within A4249_RS02910at 619.080 kb on - strand, within A4249_RS02910at 619.080 kb on - strand, within A4249_RS02910at 619.080 kb on - strand, within A4249_RS02910at 619.373 kb on + strand, within A4249_RS02910at 619.373 kb on + strand, within A4249_RS02910at 619.373 kb on + strand, within A4249_RS02910at 619.373 kb on + strand, within A4249_RS02910at 619.373 kb on + strand, within A4249_RS02910at 619.374 kb on - strand, within A4249_RS02910at 619.374 kb on - strand, within A4249_RS02910at 619.522 kb on + strandat 619.522 kb on + strandat 619.522 kb on + strandat 619.523 kb on - strandat 619.523 kb on - strandat 619.523 kb on - strandat 620.011 kb on - strand, within A4249_RS02915at 620.222 kb on + strand, within A4249_RS02915at 620.427 kb on + strandat 620.427 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Adenine 0.74 mM (C)
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618,280 + A4249_RS02905 0.34 -1.0
618,281 - A4249_RS02905 0.34 -0.8
618,281 - A4249_RS02905 0.34 +0.4
618,284 + A4249_RS02905 0.34 -0.2
618,478 - A4249_RS02905 0.52 -0.5
618,833 + A4249_RS02905 0.84 -0.0
618,833 + A4249_RS02905 0.84 -2.5
619,079 + A4249_RS02910 0.14 +2.0
619,080 - A4249_RS02910 0.14 +0.0
619,080 - A4249_RS02910 0.14 +0.1
619,080 - A4249_RS02910 0.14 -0.9
619,080 - A4249_RS02910 0.14 -0.1
619,080 - A4249_RS02910 0.14 -0.5
619,080 - A4249_RS02910 0.14 -0.5
619,373 + A4249_RS02910 0.76 -0.0
619,373 + A4249_RS02910 0.76 -0.6
619,373 + A4249_RS02910 0.76 -1.7
619,373 + A4249_RS02910 0.76 -0.6
619,373 + A4249_RS02910 0.76 -0.3
619,374 - A4249_RS02910 0.76 -0.3
619,374 - A4249_RS02910 0.76 -0.2
619,522 + -0.0
619,522 + -0.8
619,522 + -1.0
619,523 - +0.0
619,523 - +0.9
619,523 - +0.6
620,011 - A4249_RS02915 0.60 +0.7
620,222 + A4249_RS02915 0.88 -0.2
620,427 + -0.2
620,427 + -0.6

Or see this region's nucleotide sequence