Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS01765

Experiment: Adenine 0.74 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS01755 and A4249_RS01760 overlap by 1 nucleotidesA4249_RS01760 and A4249_RS01765 overlap by 4 nucleotidesA4249_RS01765 and A4249_RS01770 are separated by 134 nucleotidesA4249_RS01770 and A4249_RS01775 are separated by 80 nucleotidesA4249_RS01775 and A4249_RS01780 are separated by 197 nucleotides A4249_RS01755: A4249_RS01755 - recombinase family protein, at 335,401 to 336,987 _RS01755 A4249_RS01760: A4249_RS01760 - DUF2924 domain-containing protein, at 336,987 to 337,376 _RS01760 A4249_RS01765: A4249_RS01765 - DUF3489 domain-containing protein, at 337,373 to 337,813 _RS01765 A4249_RS01770: A4249_RS01770 - hypothetical protein, at 337,948 to 338,130 _RS01770 A4249_RS01775: A4249_RS01775 - helix-turn-helix transcriptional regulator, at 338,211 to 338,417 _RS01775 A4249_RS01780: A4249_RS01780 - hypothetical protein, at 338,615 to 339,415 _RS01780 Position (kb) 337 338Strain fitness (log2 ratio) -2 -1 0 1 2at 336.476 kb on + strand, within A4249_RS01755at 336.486 kb on - strand, within A4249_RS01755at 336.486 kb on - strand, within A4249_RS01755at 336.516 kb on + strand, within A4249_RS01755at 336.516 kb on + strand, within A4249_RS01755at 336.516 kb on + strand, within A4249_RS01755at 336.516 kb on + strand, within A4249_RS01755at 336.516 kb on + strand, within A4249_RS01755at 336.516 kb on + strand, within A4249_RS01755at 336.516 kb on + strand, within A4249_RS01755at 336.516 kb on + strand, within A4249_RS01755at 336.516 kb on + strand, within A4249_RS01755at 336.516 kb on + strand, within A4249_RS01755at 336.517 kb on - strand, within A4249_RS01755at 336.517 kb on - strand, within A4249_RS01755at 336.517 kb on - strand, within A4249_RS01755at 336.517 kb on - strand, within A4249_RS01755at 336.517 kb on - strand, within A4249_RS01755at 336.517 kb on - strand, within A4249_RS01755at 336.517 kb on - strand, within A4249_RS01755at 336.737 kb on + strand, within A4249_RS01755at 336.737 kb on + strand, within A4249_RS01755at 336.737 kb on + strand, within A4249_RS01755at 336.737 kb on + strand, within A4249_RS01755at 336.738 kb on - strand, within A4249_RS01755at 336.738 kb on - strand, within A4249_RS01755at 336.738 kb on - strand, within A4249_RS01755at 336.836 kb on + strandat 336.884 kb on + strandat 336.884 kb on + strandat 336.884 kb on + strandat 336.884 kb on + strandat 336.884 kb on + strandat 336.884 kb on + strandat 336.884 kb on + strandat 336.884 kb on + strandat 336.884 kb on + strandat 336.884 kb on + strandat 336.885 kb on - strandat 336.885 kb on - strandat 336.885 kb on - strandat 336.885 kb on - strandat 336.885 kb on - strandat 336.885 kb on - strandat 336.960 kb on + strandat 336.962 kb on + strandat 336.962 kb on + strandat 336.962 kb on + strandat 336.962 kb on + strandat 336.962 kb on + strandat 336.962 kb on + strandat 336.962 kb on + strandat 336.963 kb on - strandat 336.963 kb on - strandat 336.963 kb on - strandat 336.963 kb on - strandat 336.963 kb on - strandat 336.963 kb on - strandat 336.963 kb on - strandat 337.090 kb on + strand, within A4249_RS01760at 337.091 kb on - strand, within A4249_RS01760at 337.091 kb on - strand, within A4249_RS01760at 337.091 kb on - strand, within A4249_RS01760at 337.203 kb on + strand, within A4249_RS01760at 337.203 kb on + strand, within A4249_RS01760at 337.203 kb on + strand, within A4249_RS01760at 337.203 kb on + strand, within A4249_RS01760at 337.203 kb on + strand, within A4249_RS01760at 337.392 kb on + strandat 337.437 kb on + strand, within A4249_RS01765at 337.437 kb on + strand, within A4249_RS01765at 337.437 kb on + strand, within A4249_RS01765at 337.564 kb on + strand, within A4249_RS01765at 337.685 kb on + strand, within A4249_RS01765at 337.685 kb on + strand, within A4249_RS01765at 337.686 kb on - strand, within A4249_RS01765at 337.686 kb on - strand, within A4249_RS01765at 337.686 kb on - strand, within A4249_RS01765at 337.802 kb on + strandat 337.802 kb on + strandat 337.802 kb on + strandat 337.802 kb on + strandat 337.802 kb on + strandat 337.802 kb on + strandat 337.803 kb on - strandat 337.803 kb on - strandat 337.803 kb on - strandat 337.803 kb on - strandat 337.803 kb on - strandat 337.803 kb on - strandat 337.949 kb on + strandat 337.949 kb on + strandat 337.968 kb on + strand, within A4249_RS01770at 337.968 kb on + strand, within A4249_RS01770at 337.968 kb on + strand, within A4249_RS01770at 337.969 kb on - strand, within A4249_RS01770at 337.969 kb on - strand, within A4249_RS01770at 338.086 kb on + strand, within A4249_RS01770at 338.086 kb on + strand, within A4249_RS01770at 338.086 kb on + strand, within A4249_RS01770at 338.086 kb on + strand, within A4249_RS01770at 338.086 kb on + strand, within A4249_RS01770at 338.086 kb on + strand, within A4249_RS01770at 338.086 kb on + strand, within A4249_RS01770at 338.086 kb on + strand, within A4249_RS01770at 338.086 kb on + strand, within A4249_RS01770at 338.087 kb on - strand, within A4249_RS01770at 338.087 kb on - strand, within A4249_RS01770at 338.087 kb on - strand, within A4249_RS01770at 338.087 kb on - strand, within A4249_RS01770at 338.087 kb on - strand, within A4249_RS01770at 338.087 kb on - strand, within A4249_RS01770at 338.087 kb on - strand, within A4249_RS01770at 338.150 kb on + strandat 338.150 kb on + strandat 338.150 kb on + strandat 338.150 kb on + strandat 338.150 kb on + strandat 338.150 kb on + strandat 338.150 kb on + strandat 338.151 kb on - strandat 338.151 kb on - strandat 338.151 kb on - strandat 338.151 kb on - strandat 338.151 kb on - strandat 338.151 kb on - strandat 338.151 kb on - strandat 338.199 kb on + strandat 338.199 kb on + strandat 338.199 kb on + strandat 338.199 kb on + strandat 338.199 kb on + strandat 338.199 kb on + strandat 338.199 kb on + strandat 338.200 kb on - strandat 338.200 kb on - strandat 338.200 kb on - strandat 338.200 kb on - strandat 338.212 kb on + strandat 338.212 kb on + strandat 338.213 kb on - strandat 338.213 kb on - strandat 338.213 kb on - strandat 338.453 kb on + strandat 338.453 kb on + strandat 338.453 kb on + strandat 338.453 kb on + strandat 338.453 kb on + strandat 338.453 kb on + strandat 338.454 kb on - strandat 338.454 kb on - strandat 338.454 kb on - strandat 338.454 kb on - strandat 338.460 kb on + strandat 338.460 kb on + strandat 338.460 kb on + strandat 338.460 kb on + strandat 338.460 kb on + strandat 338.460 kb on + strandat 338.460 kb on + strandat 338.460 kb on + strandat 338.460 kb on + strandat 338.461 kb on - strandat 338.461 kb on - strandat 338.461 kb on - strandat 338.461 kb on - strandat 338.461 kb on - strandat 338.461 kb on - strandat 338.461 kb on - strandat 338.461 kb on - strandat 338.461 kb on - strandat 338.524 kb on + strandat 338.524 kb on + strandat 338.525 kb on - strandat 338.525 kb on - strandat 338.525 kb on - strandat 338.525 kb on - strandat 338.525 kb on - strandat 338.525 kb on - strandat 338.525 kb on - strandat 338.525 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Adenine 0.74 mM (C)
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336,476 + A4249_RS01755 0.68 -0.3
336,486 - A4249_RS01755 0.68 +0.1
336,486 - A4249_RS01755 0.68 -0.2
336,516 + A4249_RS01755 0.70 -0.6
336,516 + A4249_RS01755 0.70 +0.7
336,516 + A4249_RS01755 0.70 +0.3
336,516 + A4249_RS01755 0.70 +0.1
336,516 + A4249_RS01755 0.70 +0.5
336,516 + A4249_RS01755 0.70 -0.4
336,516 + A4249_RS01755 0.70 -0.8
336,516 + A4249_RS01755 0.70 -0.5
336,516 + A4249_RS01755 0.70 +0.4
336,516 + A4249_RS01755 0.70 +0.3
336,517 - A4249_RS01755 0.70 -0.7
336,517 - A4249_RS01755 0.70 +1.0
336,517 - A4249_RS01755 0.70 +0.1
336,517 - A4249_RS01755 0.70 -0.0
336,517 - A4249_RS01755 0.70 -0.5
336,517 - A4249_RS01755 0.70 -0.1
336,517 - A4249_RS01755 0.70 -0.4
336,737 + A4249_RS01755 0.84 +0.7
336,737 + A4249_RS01755 0.84 -0.2
336,737 + A4249_RS01755 0.84 +0.2
336,737 + A4249_RS01755 0.84 +0.3
336,738 - A4249_RS01755 0.84 +0.2
336,738 - A4249_RS01755 0.84 +1.5
336,738 - A4249_RS01755 0.84 -0.1
336,836 + -1.4
336,884 + -0.5
336,884 + -0.1
336,884 + +0.1
336,884 + +1.2
336,884 + -0.1
336,884 + +0.2
336,884 + +0.5
336,884 + -0.2
336,884 + -1.1
336,884 + -0.2
336,885 - -0.4
336,885 - -0.2
336,885 - +0.7
336,885 - -0.9
336,885 - +1.1
336,885 - -0.8
336,960 + +0.2
336,962 + -0.6
336,962 + +1.5
336,962 + -0.2
336,962 + -0.2
336,962 + +0.5
336,962 + +0.6
336,962 + +0.3
336,963 - +0.0
336,963 - +0.5
336,963 - +0.4
336,963 - -0.4
336,963 - -0.1
336,963 - -0.7
336,963 - -0.0
337,090 + A4249_RS01760 0.26 +0.8
337,091 - A4249_RS01760 0.27 +0.0
337,091 - A4249_RS01760 0.27 -0.1
337,091 - A4249_RS01760 0.27 +0.4
337,203 + A4249_RS01760 0.55 -0.1
337,203 + A4249_RS01760 0.55 +0.6
337,203 + A4249_RS01760 0.55 +0.0
337,203 + A4249_RS01760 0.55 -0.6
337,203 + A4249_RS01760 0.55 -0.3
337,392 + +0.2
337,437 + A4249_RS01765 0.15 -0.3
337,437 + A4249_RS01765 0.15 -2.0
337,437 + A4249_RS01765 0.15 -0.3
337,564 + A4249_RS01765 0.43 -0.3
337,685 + A4249_RS01765 0.71 -0.2
337,685 + A4249_RS01765 0.71 -0.0
337,686 - A4249_RS01765 0.71 +0.1
337,686 - A4249_RS01765 0.71 -0.5
337,686 - A4249_RS01765 0.71 -0.6
337,802 + +0.3
337,802 + -0.0
337,802 + -0.1
337,802 + +1.6
337,802 + -0.0
337,802 + +0.7
337,803 - +0.1
337,803 - +0.1
337,803 - -0.1
337,803 - -1.0
337,803 - -0.2
337,803 - -0.3
337,949 + +0.2
337,949 + -0.2
337,968 + A4249_RS01770 0.11 +0.6
337,968 + A4249_RS01770 0.11 +0.0
337,968 + A4249_RS01770 0.11 +0.9
337,969 - A4249_RS01770 0.11 +0.3
337,969 - A4249_RS01770 0.11 +1.7
338,086 + A4249_RS01770 0.75 -0.2
338,086 + A4249_RS01770 0.75 -0.0
338,086 + A4249_RS01770 0.75 -0.1
338,086 + A4249_RS01770 0.75 -0.2
338,086 + A4249_RS01770 0.75 +0.3
338,086 + A4249_RS01770 0.75 +0.4
338,086 + A4249_RS01770 0.75 -0.3
338,086 + A4249_RS01770 0.75 +0.4
338,086 + A4249_RS01770 0.75 +0.2
338,087 - A4249_RS01770 0.76 -1.0
338,087 - A4249_RS01770 0.76 -0.1
338,087 - A4249_RS01770 0.76 +0.2
338,087 - A4249_RS01770 0.76 -0.2
338,087 - A4249_RS01770 0.76 -0.1
338,087 - A4249_RS01770 0.76 +0.2
338,087 - A4249_RS01770 0.76 -0.1
338,150 + +0.3
338,150 + -0.3
338,150 + -0.7
338,150 + +0.5
338,150 + +0.5
338,150 + +0.4
338,150 + +0.3
338,151 - +0.0
338,151 - -0.2
338,151 - -0.2
338,151 - -0.7
338,151 - -0.4
338,151 - +0.4
338,151 - +0.1
338,199 + -0.6
338,199 + -0.1
338,199 + +0.1
338,199 + +0.4
338,199 + +0.1
338,199 + +0.2
338,199 + -1.3
338,200 - +0.7
338,200 - -0.8
338,200 - +0.3
338,200 - -0.6
338,212 + -0.7
338,212 + -0.1
338,213 - -0.0
338,213 - -2.1
338,213 - +0.3
338,453 + -0.7
338,453 + +0.0
338,453 + -0.1
338,453 + +0.3
338,453 + -0.2
338,453 + -0.4
338,454 - +0.5
338,454 - +0.3
338,454 - +0.4
338,454 - +0.2
338,460 + -1.6
338,460 + +0.2
338,460 + -0.5
338,460 + +0.2
338,460 + -0.1
338,460 + -0.2
338,460 + -0.4
338,460 + -0.2
338,460 + -0.8
338,461 - +0.9
338,461 - +0.6
338,461 - +0.0
338,461 - +1.8
338,461 - -0.2
338,461 - +1.4
338,461 - +0.8
338,461 - -0.7
338,461 - +0.2
338,524 + +0.3
338,524 + -0.0
338,525 - +0.3
338,525 - +0.2
338,525 - +0.2
338,525 - -0.5
338,525 - -0.7
338,525 - -1.0
338,525 - -1.0
338,525 - -0.2

Or see this region's nucleotide sequence