Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS00670

Experiment: Adenine 0.74 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS00665 and A4249_RS00670 are separated by 63 nucleotidesA4249_RS00670 and A4249_RS00675 are separated by 80 nucleotides A4249_RS00665: A4249_RS00665 - PAS domain-containing protein, at 122,752 to 124,689 _RS00665 A4249_RS00670: A4249_RS00670 - response regulator, at 124,753 to 125,160 _RS00670 A4249_RS00675: A4249_RS00675 - aldo/keto reductase, at 125,241 to 126,191 _RS00675 Position (kb) 124 125 126Strain fitness (log2 ratio) -3 -2 -1 0 1at 123.763 kb on + strand, within A4249_RS00665at 123.764 kb on - strand, within A4249_RS00665at 123.764 kb on - strand, within A4249_RS00665at 123.764 kb on - strand, within A4249_RS00665at 123.764 kb on - strand, within A4249_RS00665at 123.766 kb on + strand, within A4249_RS00665at 123.766 kb on + strand, within A4249_RS00665at 123.766 kb on + strand, within A4249_RS00665at 123.766 kb on + strand, within A4249_RS00665at 123.766 kb on + strand, within A4249_RS00665at 123.766 kb on + strand, within A4249_RS00665at 123.766 kb on + strand, within A4249_RS00665at 123.766 kb on + strand, within A4249_RS00665at 123.766 kb on + strand, within A4249_RS00665at 123.766 kb on + strand, within A4249_RS00665at 123.766 kb on + strand, within A4249_RS00665at 123.766 kb on + strand, within A4249_RS00665at 123.766 kb on + strand, within A4249_RS00665at 123.766 kb on + strand, within A4249_RS00665at 123.766 kb on + strand, within A4249_RS00665at 123.766 kb on + strand, within A4249_RS00665at 123.766 kb on + strand, within A4249_RS00665at 123.766 kb on + strand, within A4249_RS00665at 123.766 kb on + strand, within A4249_RS00665at 123.766 kb on + strand, within A4249_RS00665at 123.767 kb on - strand, within A4249_RS00665at 123.767 kb on - strand, within A4249_RS00665at 123.767 kb on - strand, within A4249_RS00665at 123.767 kb on - strand, within A4249_RS00665at 123.767 kb on - strand, within A4249_RS00665at 123.767 kb on - strand, within A4249_RS00665at 123.767 kb on - strand, within A4249_RS00665at 123.767 kb on - strand, within A4249_RS00665at 123.767 kb on - strand, within A4249_RS00665at 123.767 kb on - strand, within A4249_RS00665at 123.767 kb on - strand, within A4249_RS00665at 123.767 kb on - strand, within A4249_RS00665at 123.767 kb on - strand, within A4249_RS00665at 123.767 kb on - strand, within A4249_RS00665at 123.767 kb on - strand, within A4249_RS00665at 123.767 kb on - strand, within A4249_RS00665at 123.767 kb on - strand, within A4249_RS00665at 123.767 kb on - strand, within A4249_RS00665at 123.767 kb on - strand, within A4249_RS00665at 123.767 kb on - strand, within A4249_RS00665at 123.767 kb on - strand, within A4249_RS00665at 123.904 kb on + strand, within A4249_RS00665at 123.904 kb on + strand, within A4249_RS00665at 123.905 kb on - strand, within A4249_RS00665at 123.905 kb on - strand, within A4249_RS00665at 123.917 kb on - strand, within A4249_RS00665at 123.943 kb on + strand, within A4249_RS00665at 123.943 kb on + strand, within A4249_RS00665at 123.943 kb on + strand, within A4249_RS00665at 123.944 kb on - strand, within A4249_RS00665at 123.944 kb on - strand, within A4249_RS00665at 124.141 kb on + strand, within A4249_RS00665at 124.141 kb on + strand, within A4249_RS00665at 124.294 kb on + strand, within A4249_RS00665at 124.294 kb on + strand, within A4249_RS00665at 124.294 kb on + strand, within A4249_RS00665at 124.295 kb on - strand, within A4249_RS00665at 124.295 kb on - strand, within A4249_RS00665at 124.295 kb on - strand, within A4249_RS00665at 124.295 kb on - strand, within A4249_RS00665at 124.414 kb on + strand, within A4249_RS00665at 124.414 kb on + strand, within A4249_RS00665at 124.415 kb on - strand, within A4249_RS00665at 124.415 kb on - strand, within A4249_RS00665at 124.415 kb on - strand, within A4249_RS00665at 124.415 kb on - strand, within A4249_RS00665at 124.415 kb on - strand, within A4249_RS00665at 124.687 kb on + strandat 124.687 kb on + strandat 124.687 kb on + strandat 124.688 kb on - strandat 124.688 kb on - strandat 124.696 kb on - strandat 124.723 kb on + strandat 124.723 kb on + strandat 124.723 kb on + strandat 124.723 kb on + strandat 124.723 kb on + strandat 124.723 kb on + strandat 125.128 kb on + strandat 125.129 kb on - strandat 125.198 kb on + strandat 125.198 kb on + strandat 125.198 kb on + strandat 125.198 kb on + strandat 125.198 kb on + strandat 125.199 kb on - strandat 125.199 kb on - strandat 125.199 kb on - strandat 125.199 kb on - strandat 125.199 kb on - strandat 125.215 kb on - strandat 125.215 kb on - strandat 125.215 kb on - strandat 125.215 kb on - strandat 125.397 kb on + strand, within A4249_RS00675at 125.595 kb on + strand, within A4249_RS00675at 125.595 kb on + strand, within A4249_RS00675at 125.595 kb on + strand, within A4249_RS00675at 125.595 kb on + strand, within A4249_RS00675at 125.595 kb on + strand, within A4249_RS00675at 125.595 kb on + strand, within A4249_RS00675at 125.595 kb on + strand, within A4249_RS00675at 125.595 kb on + strand, within A4249_RS00675at 125.596 kb on - strand, within A4249_RS00675at 125.596 kb on - strand, within A4249_RS00675at 125.596 kb on - strand, within A4249_RS00675at 125.596 kb on - strand, within A4249_RS00675at 125.596 kb on - strand, within A4249_RS00675at 125.596 kb on - strand, within A4249_RS00675at 125.596 kb on - strand, within A4249_RS00675at 125.596 kb on - strand, within A4249_RS00675at 125.597 kb on + strand, within A4249_RS00675at 125.597 kb on + strand, within A4249_RS00675at 125.597 kb on + strand, within A4249_RS00675at 125.597 kb on + strand, within A4249_RS00675at 125.598 kb on - strand, within A4249_RS00675at 125.598 kb on - strand, within A4249_RS00675at 125.598 kb on - strand, within A4249_RS00675at 125.607 kb on + strand, within A4249_RS00675at 125.607 kb on + strand, within A4249_RS00675at 125.607 kb on + strand, within A4249_RS00675at 125.607 kb on + strand, within A4249_RS00675at 125.607 kb on + strand, within A4249_RS00675at 125.607 kb on + strand, within A4249_RS00675at 125.608 kb on - strand, within A4249_RS00675at 125.608 kb on - strand, within A4249_RS00675at 125.666 kb on + strand, within A4249_RS00675at 125.667 kb on - strand, within A4249_RS00675at 125.667 kb on - strand, within A4249_RS00675at 125.744 kb on + strand, within A4249_RS00675at 125.745 kb on - strand, within A4249_RS00675at 125.745 kb on - strand, within A4249_RS00675at 125.745 kb on - strand, within A4249_RS00675at 125.745 kb on - strand, within A4249_RS00675at 125.772 kb on + strand, within A4249_RS00675at 125.772 kb on + strand, within A4249_RS00675at 125.793 kb on + strand, within A4249_RS00675at 125.793 kb on + strand, within A4249_RS00675at 125.793 kb on + strand, within A4249_RS00675at 125.793 kb on + strand, within A4249_RS00675at 125.793 kb on + strand, within A4249_RS00675at 125.794 kb on - strand, within A4249_RS00675at 125.794 kb on - strand, within A4249_RS00675at 125.794 kb on - strand, within A4249_RS00675at 125.794 kb on - strand, within A4249_RS00675at 125.794 kb on - strand, within A4249_RS00675at 125.794 kb on - strand, within A4249_RS00675at 125.794 kb on - strand, within A4249_RS00675at 125.794 kb on - strand, within A4249_RS00675at 125.794 kb on - strand, within A4249_RS00675at 125.794 kb on - strand, within A4249_RS00675at 125.794 kb on - strand, within A4249_RS00675at 125.803 kb on - strand, within A4249_RS00675at 125.803 kb on - strand, within A4249_RS00675at 125.803 kb on - strand, within A4249_RS00675at 125.803 kb on - strand, within A4249_RS00675at 125.871 kb on + strand, within A4249_RS00675at 125.871 kb on + strand, within A4249_RS00675at 125.871 kb on + strand, within A4249_RS00675at 125.871 kb on + strand, within A4249_RS00675at 125.872 kb on - strand, within A4249_RS00675at 125.872 kb on - strand, within A4249_RS00675at 125.872 kb on - strand, within A4249_RS00675at 125.872 kb on - strand, within A4249_RS00675at 125.907 kb on + strand, within A4249_RS00675at 125.907 kb on + strand, within A4249_RS00675at 125.907 kb on + strand, within A4249_RS00675at 125.984 kb on + strand, within A4249_RS00675at 125.984 kb on + strand, within A4249_RS00675at 125.985 kb on - strand, within A4249_RS00675at 126.087 kb on + strand, within A4249_RS00675at 126.088 kb on + strand, within A4249_RS00675at 126.089 kb on - strand, within A4249_RS00675at 126.089 kb on - strand, within A4249_RS00675

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Per-strain Table

Position Strand Gene LocusTag Fraction Adenine 0.74 mM (C)
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123,763 + A4249_RS00665 0.52 -0.6
123,764 - A4249_RS00665 0.52 -1.4
123,764 - A4249_RS00665 0.52 -0.8
123,764 - A4249_RS00665 0.52 -0.2
123,764 - A4249_RS00665 0.52 +0.2
123,766 + A4249_RS00665 0.52 +0.2
123,766 + A4249_RS00665 0.52 -0.0
123,766 + A4249_RS00665 0.52 +0.3
123,766 + A4249_RS00665 0.52 +0.3
123,766 + A4249_RS00665 0.52 +0.2
123,766 + A4249_RS00665 0.52 -0.3
123,766 + A4249_RS00665 0.52 -0.5
123,766 + A4249_RS00665 0.52 -0.2
123,766 + A4249_RS00665 0.52 +0.4
123,766 + A4249_RS00665 0.52 -0.3
123,766 + A4249_RS00665 0.52 +0.1
123,766 + A4249_RS00665 0.52 -0.1
123,766 + A4249_RS00665 0.52 -0.3
123,766 + A4249_RS00665 0.52 -0.3
123,766 + A4249_RS00665 0.52 -1.1
123,766 + A4249_RS00665 0.52 -0.2
123,766 + A4249_RS00665 0.52 -0.0
123,766 + A4249_RS00665 0.52 +0.0
123,766 + A4249_RS00665 0.52 -1.1
123,766 + A4249_RS00665 0.52 -1.3
123,767 - A4249_RS00665 0.52 -0.6
123,767 - A4249_RS00665 0.52 +0.1
123,767 - A4249_RS00665 0.52 -0.4
123,767 - A4249_RS00665 0.52 -2.4
123,767 - A4249_RS00665 0.52 -0.1
123,767 - A4249_RS00665 0.52 +0.2
123,767 - A4249_RS00665 0.52 -0.1
123,767 - A4249_RS00665 0.52 -0.1
123,767 - A4249_RS00665 0.52 -0.6
123,767 - A4249_RS00665 0.52 +0.1
123,767 - A4249_RS00665 0.52 -0.1
123,767 - A4249_RS00665 0.52 -0.3
123,767 - A4249_RS00665 0.52 -0.2
123,767 - A4249_RS00665 0.52 +0.4
123,767 - A4249_RS00665 0.52 +0.1
123,767 - A4249_RS00665 0.52 -0.1
123,767 - A4249_RS00665 0.52 -0.3
123,767 - A4249_RS00665 0.52 -0.4
123,767 - A4249_RS00665 0.52 -0.3
123,767 - A4249_RS00665 0.52 -0.5
123,767 - A4249_RS00665 0.52 -0.3
123,904 + A4249_RS00665 0.59 -0.0
123,904 + A4249_RS00665 0.59 +0.1
123,905 - A4249_RS00665 0.59 +0.3
123,905 - A4249_RS00665 0.59 -0.6
123,917 - A4249_RS00665 0.60 -0.4
123,943 + A4249_RS00665 0.61 -0.3
123,943 + A4249_RS00665 0.61 -0.1
123,943 + A4249_RS00665 0.61 -0.1
123,944 - A4249_RS00665 0.62 -0.2
123,944 - A4249_RS00665 0.62 -0.4
124,141 + A4249_RS00665 0.72 -0.1
124,141 + A4249_RS00665 0.72 -0.2
124,294 + A4249_RS00665 0.80 -0.0
124,294 + A4249_RS00665 0.80 -0.2
124,294 + A4249_RS00665 0.80 +0.3
124,295 - A4249_RS00665 0.80 -0.5
124,295 - A4249_RS00665 0.80 -0.3
124,295 - A4249_RS00665 0.80 -0.4
124,295 - A4249_RS00665 0.80 -0.0
124,414 + A4249_RS00665 0.86 -0.0
124,414 + A4249_RS00665 0.86 +0.1
124,415 - A4249_RS00665 0.86 -0.3
124,415 - A4249_RS00665 0.86 -0.2
124,415 - A4249_RS00665 0.86 -0.2
124,415 - A4249_RS00665 0.86 +1.1
124,415 - A4249_RS00665 0.86 +0.0
124,687 + +0.6
124,687 + -0.7
124,687 + -0.5
124,688 - -0.2
124,688 - +1.1
124,696 - +1.3
124,723 + -0.8
124,723 + +0.9
124,723 + -1.0
124,723 + +0.5
124,723 + +0.3
124,723 + -0.2
125,128 + +0.2
125,129 - +0.2
125,198 + +0.0
125,198 + +0.9
125,198 + -0.1
125,198 + +1.0
125,198 + -1.0
125,199 - -2.4
125,199 - +1.0
125,199 - +0.8
125,199 - -0.1
125,199 - -0.3
125,215 - -0.5
125,215 - +0.2
125,215 - -0.7
125,215 - +0.1
125,397 + A4249_RS00675 0.16 -1.1
125,595 + A4249_RS00675 0.37 -0.9
125,595 + A4249_RS00675 0.37 -0.6
125,595 + A4249_RS00675 0.37 -0.3
125,595 + A4249_RS00675 0.37 -0.6
125,595 + A4249_RS00675 0.37 -0.7
125,595 + A4249_RS00675 0.37 -0.6
125,595 + A4249_RS00675 0.37 +1.2
125,595 + A4249_RS00675 0.37 -0.2
125,596 - A4249_RS00675 0.37 +0.0
125,596 - A4249_RS00675 0.37 -0.9
125,596 - A4249_RS00675 0.37 -0.6
125,596 - A4249_RS00675 0.37 -0.2
125,596 - A4249_RS00675 0.37 -0.8
125,596 - A4249_RS00675 0.37 -1.0
125,596 - A4249_RS00675 0.37 -0.5
125,596 - A4249_RS00675 0.37 -1.2
125,597 + A4249_RS00675 0.37 -0.0
125,597 + A4249_RS00675 0.37 -0.7
125,597 + A4249_RS00675 0.37 -0.9
125,597 + A4249_RS00675 0.37 -0.3
125,598 - A4249_RS00675 0.38 +0.2
125,598 - A4249_RS00675 0.38 +0.1
125,598 - A4249_RS00675 0.38 -2.0
125,607 + A4249_RS00675 0.38 -2.1
125,607 + A4249_RS00675 0.38 +0.0
125,607 + A4249_RS00675 0.38 -0.2
125,607 + A4249_RS00675 0.38 +0.0
125,607 + A4249_RS00675 0.38 -0.3
125,607 + A4249_RS00675 0.38 -0.3
125,608 - A4249_RS00675 0.39 +0.3
125,608 - A4249_RS00675 0.39 -0.2
125,666 + A4249_RS00675 0.45 -1.1
125,667 - A4249_RS00675 0.45 -0.5
125,667 - A4249_RS00675 0.45 +0.4
125,744 + A4249_RS00675 0.53 -2.8
125,745 - A4249_RS00675 0.53 -2.5
125,745 - A4249_RS00675 0.53 -0.4
125,745 - A4249_RS00675 0.53 +0.1
125,745 - A4249_RS00675 0.53 +0.5
125,772 + A4249_RS00675 0.56 -1.0
125,772 + A4249_RS00675 0.56 -0.5
125,793 + A4249_RS00675 0.58 -0.5
125,793 + A4249_RS00675 0.58 +0.3
125,793 + A4249_RS00675 0.58 -0.4
125,793 + A4249_RS00675 0.58 -0.1
125,793 + A4249_RS00675 0.58 +0.1
125,794 - A4249_RS00675 0.58 +0.3
125,794 - A4249_RS00675 0.58 +0.8
125,794 - A4249_RS00675 0.58 +0.3
125,794 - A4249_RS00675 0.58 -0.5
125,794 - A4249_RS00675 0.58 -0.7
125,794 - A4249_RS00675 0.58 -0.8
125,794 - A4249_RS00675 0.58 -0.5
125,794 - A4249_RS00675 0.58 +0.1
125,794 - A4249_RS00675 0.58 -0.7
125,794 - A4249_RS00675 0.58 +0.5
125,794 - A4249_RS00675 0.58 -0.1
125,803 - A4249_RS00675 0.59 -1.1
125,803 - A4249_RS00675 0.59 +0.1
125,803 - A4249_RS00675 0.59 -1.2
125,803 - A4249_RS00675 0.59 -0.1
125,871 + A4249_RS00675 0.66 -0.1
125,871 + A4249_RS00675 0.66 -0.2
125,871 + A4249_RS00675 0.66 -0.1
125,871 + A4249_RS00675 0.66 +0.1
125,872 - A4249_RS00675 0.66 +0.2
125,872 - A4249_RS00675 0.66 -0.3
125,872 - A4249_RS00675 0.66 +0.6
125,872 - A4249_RS00675 0.66 -0.2
125,907 + A4249_RS00675 0.70 +0.4
125,907 + A4249_RS00675 0.70 +0.2
125,907 + A4249_RS00675 0.70 +1.4
125,984 + A4249_RS00675 0.78 +0.5
125,984 + A4249_RS00675 0.78 -0.1
125,985 - A4249_RS00675 0.78 +0.4
126,087 + A4249_RS00675 0.89 +0.1
126,088 + A4249_RS00675 0.89 +0.2
126,089 - A4249_RS00675 0.89 -0.4
126,089 - A4249_RS00675 0.89 -0.6

Or see this region's nucleotide sequence