Experiment: Adenine 0.74 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS00655 and A4249_RS00660 are separated by 235 nucleotides A4249_RS00660 and A4249_RS00665 are separated by 79 nucleotides
A4249_RS00655: A4249_RS00655 - PAS domain S-box protein, at 118,016 to 121,255
_RS00655
A4249_RS00660: A4249_RS00660 - cell wall hydrolase, at 121,491 to 122,672
_RS00660
A4249_RS00665: A4249_RS00665 - PAS domain-containing protein, at 122,752 to 124,689
_RS00665
Position (kb) 121
122
123 Strain fitness (log2 ratio) -2
-1
0
1 at 120.559 kb on - strand, within A4249_RS00655 at 120.698 kb on + strand, within A4249_RS00655 at 120.698 kb on + strand, within A4249_RS00655 at 120.699 kb on - strand, within A4249_RS00655 at 121.134 kb on + strand at 121.134 kb on + strand at 121.134 kb on + strand at 121.135 kb on - strand at 121.135 kb on - strand at 121.291 kb on + strand at 121.291 kb on + strand at 121.337 kb on + strand at 121.337 kb on + strand at 121.337 kb on + strand at 121.337 kb on + strand at 121.337 kb on + strand at 121.337 kb on + strand at 121.337 kb on + strand at 121.338 kb on - strand at 121.338 kb on - strand at 121.338 kb on - strand at 121.338 kb on - strand at 121.338 kb on - strand at 121.338 kb on - strand at 121.343 kb on + strand at 121.343 kb on + strand at 121.343 kb on + strand at 121.343 kb on + strand at 121.343 kb on + strand at 121.343 kb on + strand at 121.343 kb on + strand at 121.343 kb on + strand at 121.343 kb on + strand at 121.344 kb on - strand at 121.423 kb on + strand at 121.423 kb on + strand at 121.423 kb on + strand at 121.423 kb on + strand at 121.423 kb on + strand at 121.423 kb on + strand at 121.424 kb on - strand at 121.424 kb on - strand at 121.424 kb on - strand at 121.424 kb on - strand at 121.424 kb on - strand at 121.424 kb on - strand at 121.424 kb on - strand at 121.425 kb on + strand at 121.425 kb on + strand at 121.425 kb on + strand at 121.425 kb on + strand at 121.425 kb on + strand at 121.425 kb on + strand at 121.425 kb on + strand at 121.425 kb on + strand at 121.426 kb on - strand at 121.426 kb on - strand at 121.426 kb on - strand at 121.426 kb on - strand at 121.426 kb on - strand at 121.426 kb on - strand at 121.426 kb on - strand at 121.426 kb on - strand at 121.435 kb on + strand at 121.435 kb on + strand at 121.436 kb on - strand at 121.478 kb on + strand at 121.755 kb on + strand, within A4249_RS00660 at 121.755 kb on + strand, within A4249_RS00660 at 121.756 kb on - strand, within A4249_RS00660 at 121.756 kb on - strand, within A4249_RS00660 at 121.956 kb on + strand, within A4249_RS00660 at 121.956 kb on + strand, within A4249_RS00660 at 121.956 kb on + strand, within A4249_RS00660 at 121.956 kb on + strand, within A4249_RS00660 at 121.956 kb on + strand, within A4249_RS00660 at 121.956 kb on + strand, within A4249_RS00660 at 121.956 kb on + strand, within A4249_RS00660 at 121.957 kb on - strand, within A4249_RS00660 at 121.957 kb on - strand, within A4249_RS00660 at 121.957 kb on - strand, within A4249_RS00660 at 121.957 kb on - strand, within A4249_RS00660 at 121.957 kb on - strand, within A4249_RS00660 at 121.957 kb on - strand, within A4249_RS00660 at 121.957 kb on - strand, within A4249_RS00660 at 121.957 kb on - strand, within A4249_RS00660 at 121.957 kb on - strand, within A4249_RS00660 at 121.959 kb on + strand, within A4249_RS00660 at 121.959 kb on + strand, within A4249_RS00660 at 121.959 kb on + strand, within A4249_RS00660 at 121.959 kb on + strand, within A4249_RS00660 at 121.960 kb on - strand, within A4249_RS00660 at 121.960 kb on - strand, within A4249_RS00660 at 121.960 kb on - strand, within A4249_RS00660 at 121.960 kb on - strand, within A4249_RS00660 at 121.960 kb on - strand, within A4249_RS00660 at 121.960 kb on - strand, within A4249_RS00660 at 122.037 kb on + strand, within A4249_RS00660 at 122.037 kb on + strand, within A4249_RS00660 at 122.037 kb on + strand, within A4249_RS00660 at 122.037 kb on + strand, within A4249_RS00660 at 122.223 kb on + strand, within A4249_RS00660 at 122.223 kb on + strand, within A4249_RS00660 at 122.223 kb on + strand, within A4249_RS00660 at 122.223 kb on + strand, within A4249_RS00660 at 122.224 kb on - strand, within A4249_RS00660 at 122.224 kb on - strand, within A4249_RS00660 at 122.224 kb on - strand, within A4249_RS00660 at 122.224 kb on - strand, within A4249_RS00660 at 122.224 kb on - strand, within A4249_RS00660 at 122.224 kb on - strand, within A4249_RS00660 at 122.224 kb on - strand, within A4249_RS00660 at 122.235 kb on + strand, within A4249_RS00660 at 122.235 kb on + strand, within A4249_RS00660 at 122.235 kb on + strand, within A4249_RS00660 at 122.235 kb on + strand, within A4249_RS00660 at 122.235 kb on + strand, within A4249_RS00660 at 122.236 kb on - strand, within A4249_RS00660 at 122.236 kb on - strand, within A4249_RS00660 at 122.236 kb on - strand, within A4249_RS00660 at 122.236 kb on - strand, within A4249_RS00660 at 122.236 kb on - strand, within A4249_RS00660 at 122.236 kb on - strand, within A4249_RS00660 at 122.236 kb on - strand, within A4249_RS00660 at 122.236 kb on - strand, within A4249_RS00660 at 122.298 kb on + strand, within A4249_RS00660 at 122.317 kb on - strand, within A4249_RS00660 at 122.317 kb on - strand, within A4249_RS00660 at 122.317 kb on - strand, within A4249_RS00660 at 122.317 kb on - strand, within A4249_RS00660 at 122.317 kb on - strand, within A4249_RS00660 at 122.346 kb on + strand, within A4249_RS00660 at 122.346 kb on + strand, within A4249_RS00660 at 122.346 kb on + strand, within A4249_RS00660 at 122.346 kb on + strand, within A4249_RS00660 at 122.346 kb on + strand, within A4249_RS00660 at 122.346 kb on + strand, within A4249_RS00660 at 122.346 kb on + strand, within A4249_RS00660 at 122.346 kb on + strand, within A4249_RS00660 at 122.347 kb on - strand, within A4249_RS00660 at 122.347 kb on - strand, within A4249_RS00660 at 122.347 kb on - strand, within A4249_RS00660 at 122.347 kb on - strand, within A4249_RS00660 at 122.347 kb on - strand, within A4249_RS00660 at 122.347 kb on - strand, within A4249_RS00660 at 122.818 kb on + strand at 122.818 kb on + strand at 122.818 kb on + strand at 122.818 kb on + strand at 122.818 kb on + strand at 122.819 kb on - strand at 122.819 kb on - strand at 122.819 kb on - strand at 122.819 kb on - strand at 122.819 kb on - strand at 122.895 kb on + strand at 122.895 kb on + strand at 122.895 kb on + strand at 122.896 kb on - strand at 122.907 kb on - strand at 123.097 kb on + strand, within A4249_RS00665 at 123.097 kb on + strand, within A4249_RS00665 at 123.097 kb on + strand, within A4249_RS00665 at 123.097 kb on + strand, within A4249_RS00665 at 123.097 kb on + strand, within A4249_RS00665 at 123.097 kb on + strand, within A4249_RS00665 at 123.097 kb on + strand, within A4249_RS00665 at 123.098 kb on - strand, within A4249_RS00665 at 123.098 kb on - strand, within A4249_RS00665 at 123.098 kb on - strand, within A4249_RS00665 at 123.098 kb on - strand, within A4249_RS00665 at 123.098 kb on - strand, within A4249_RS00665 at 123.313 kb on + strand, within A4249_RS00665 at 123.313 kb on + strand, within A4249_RS00665 at 123.314 kb on - strand, within A4249_RS00665 at 123.314 kb on - strand, within A4249_RS00665 at 123.314 kb on - strand, within A4249_RS00665 at 123.314 kb on - strand, within A4249_RS00665 at 123.382 kb on + strand, within A4249_RS00665 at 123.382 kb on + strand, within A4249_RS00665 at 123.382 kb on + strand, within A4249_RS00665 at 123.382 kb on + strand, within A4249_RS00665 at 123.382 kb on + strand, within A4249_RS00665 at 123.382 kb on + strand, within A4249_RS00665 at 123.382 kb on + strand, within A4249_RS00665 at 123.383 kb on - strand, within A4249_RS00665 at 123.383 kb on - strand, within A4249_RS00665 at 123.383 kb on - strand, within A4249_RS00665 at 123.383 kb on - strand, within A4249_RS00665 at 123.383 kb on - strand, within A4249_RS00665 at 123.383 kb on - strand, within A4249_RS00665 at 123.383 kb on - strand, within A4249_RS00665 at 123.383 kb on - strand, within A4249_RS00665 at 123.383 kb on - strand, within A4249_RS00665 at 123.383 kb on - strand, within A4249_RS00665 at 123.383 kb on - strand, within A4249_RS00665 at 123.383 kb on - strand, within A4249_RS00665 at 123.383 kb on - strand, within A4249_RS00665 at 123.383 kb on - strand, within A4249_RS00665 at 123.574 kb on + strand, within A4249_RS00665 at 123.574 kb on + strand, within A4249_RS00665 at 123.574 kb on + strand, within A4249_RS00665 at 123.575 kb on - strand, within A4249_RS00665 at 123.575 kb on - strand, within A4249_RS00665 at 123.575 kb on - strand, within A4249_RS00665 at 123.575 kb on - strand, within A4249_RS00665 at 123.575 kb on - strand, within A4249_RS00665 at 123.575 kb on - strand, within A4249_RS00665 at 123.575 kb on - strand, within A4249_RS00665 at 123.575 kb on - strand, within A4249_RS00665
Per-strain Table
Position Strand Gene LocusTag Fraction Adenine 0.74 mM (C) remove 120,559 - A4249_RS00655 0.78 -0.8 120,698 + A4249_RS00655 0.83 +1.1 120,698 + A4249_RS00655 0.83 +0.1 120,699 - A4249_RS00655 0.83 -0.3 121,134 + -1.0 121,134 + -0.4 121,134 + -1.0 121,135 - +1.5 121,135 - +0.0 121,291 + -0.9 121,291 + -0.3 121,337 + +0.6 121,337 + -0.2 121,337 + +0.2 121,337 + -0.2 121,337 + -0.4 121,337 + -0.3 121,337 + -0.4 121,338 - +1.2 121,338 - -0.8 121,338 - -0.6 121,338 - +0.6 121,338 - +1.3 121,338 - -0.0 121,343 + -1.9 121,343 + -0.3 121,343 + -0.3 121,343 + +0.1 121,343 + -0.1 121,343 + -0.8 121,343 + +0.4 121,343 + +1.2 121,343 + +0.7 121,344 - -0.8 121,423 + -0.2 121,423 + -0.2 121,423 + -0.9 121,423 + +0.8 121,423 + +0.8 121,423 + +0.5 121,424 - +0.0 121,424 - -0.0 121,424 - -0.4 121,424 - +0.8 121,424 - +0.1 121,424 - +0.4 121,424 - -0.2 121,425 + +0.3 121,425 + +0.1 121,425 + +0.5 121,425 + -0.5 121,425 + -0.8 121,425 + +0.4 121,425 + -0.2 121,425 + -0.8 121,426 - +0.4 121,426 - -0.0 121,426 - +0.6 121,426 - +0.2 121,426 - +0.1 121,426 - -0.6 121,426 - +0.7 121,426 - -0.3 121,435 + -0.8 121,435 + +0.3 121,436 - -0.0 121,478 + -0.1 121,755 + A4249_RS00660 0.22 -0.4 121,755 + A4249_RS00660 0.22 -0.3 121,756 - A4249_RS00660 0.22 -1.3 121,756 - A4249_RS00660 0.22 +0.4 121,956 + A4249_RS00660 0.39 +0.8 121,956 + A4249_RS00660 0.39 +0.4 121,956 + A4249_RS00660 0.39 +1.0 121,956 + A4249_RS00660 0.39 -0.0 121,956 + A4249_RS00660 0.39 +0.0 121,956 + A4249_RS00660 0.39 -0.2 121,956 + A4249_RS00660 0.39 +0.0 121,957 - A4249_RS00660 0.39 +0.1 121,957 - A4249_RS00660 0.39 +0.3 121,957 - A4249_RS00660 0.39 -1.3 121,957 - A4249_RS00660 0.39 -0.4 121,957 - A4249_RS00660 0.39 -0.6 121,957 - A4249_RS00660 0.39 -0.1 121,957 - A4249_RS00660 0.39 -1.3 121,957 - A4249_RS00660 0.39 -0.3 121,957 - A4249_RS00660 0.39 +0.3 121,959 + A4249_RS00660 0.40 -0.5 121,959 + A4249_RS00660 0.40 +0.4 121,959 + A4249_RS00660 0.40 +0.0 121,959 + A4249_RS00660 0.40 +0.2 121,960 - A4249_RS00660 0.40 +0.3 121,960 - A4249_RS00660 0.40 -0.0 121,960 - A4249_RS00660 0.40 -0.1 121,960 - A4249_RS00660 0.40 -0.0 121,960 - A4249_RS00660 0.40 +0.1 121,960 - A4249_RS00660 0.40 -0.2 122,037 + A4249_RS00660 0.46 +0.5 122,037 + A4249_RS00660 0.46 +0.8 122,037 + A4249_RS00660 0.46 -0.4 122,037 + A4249_RS00660 0.46 +0.3 122,223 + A4249_RS00660 0.62 -0.5 122,223 + A4249_RS00660 0.62 -1.0 122,223 + A4249_RS00660 0.62 +0.2 122,223 + A4249_RS00660 0.62 -0.5 122,224 - A4249_RS00660 0.62 -0.8 122,224 - A4249_RS00660 0.62 +0.3 122,224 - A4249_RS00660 0.62 +0.1 122,224 - A4249_RS00660 0.62 -1.1 122,224 - A4249_RS00660 0.62 -0.1 122,224 - A4249_RS00660 0.62 +0.6 122,224 - A4249_RS00660 0.62 +0.2 122,235 + A4249_RS00660 0.63 +0.5 122,235 + A4249_RS00660 0.63 +0.3 122,235 + A4249_RS00660 0.63 -0.1 122,235 + A4249_RS00660 0.63 +0.0 122,235 + A4249_RS00660 0.63 +0.1 122,236 - A4249_RS00660 0.63 +0.2 122,236 - A4249_RS00660 0.63 +0.3 122,236 - A4249_RS00660 0.63 +0.5 122,236 - A4249_RS00660 0.63 +0.0 122,236 - A4249_RS00660 0.63 -0.5 122,236 - A4249_RS00660 0.63 -1.6 122,236 - A4249_RS00660 0.63 -0.5 122,236 - A4249_RS00660 0.63 -0.3 122,298 + A4249_RS00660 0.68 -0.7 122,317 - A4249_RS00660 0.70 -2.5 122,317 - A4249_RS00660 0.70 +0.3 122,317 - A4249_RS00660 0.70 -0.1 122,317 - A4249_RS00660 0.70 +0.3 122,317 - A4249_RS00660 0.70 +0.6 122,346 + A4249_RS00660 0.72 +0.1 122,346 + A4249_RS00660 0.72 -1.4 122,346 + A4249_RS00660 0.72 -0.5 122,346 + A4249_RS00660 0.72 +0.5 122,346 + A4249_RS00660 0.72 -0.5 122,346 + A4249_RS00660 0.72 -0.3 122,346 + A4249_RS00660 0.72 +0.5 122,346 + A4249_RS00660 0.72 -0.5 122,347 - A4249_RS00660 0.72 +0.9 122,347 - A4249_RS00660 0.72 +0.0 122,347 - A4249_RS00660 0.72 +0.5 122,347 - A4249_RS00660 0.72 +0.0 122,347 - A4249_RS00660 0.72 +0.5 122,347 - A4249_RS00660 0.72 -0.0 122,818 + +0.0 122,818 + -1.0 122,818 + +0.2 122,818 + -0.3 122,818 + -0.0 122,819 - -0.4 122,819 - -1.1 122,819 - +0.0 122,819 - -0.5 122,819 - -0.2 122,895 + -0.1 122,895 + -2.2 122,895 + -0.2 122,896 - +0.8 122,907 - -2.5 123,097 + A4249_RS00665 0.18 +0.0 123,097 + A4249_RS00665 0.18 -0.2 123,097 + A4249_RS00665 0.18 +0.3 123,097 + A4249_RS00665 0.18 -0.0 123,097 + A4249_RS00665 0.18 +0.0 123,097 + A4249_RS00665 0.18 +0.1 123,097 + A4249_RS00665 0.18 -0.7 123,098 - A4249_RS00665 0.18 -0.4 123,098 - A4249_RS00665 0.18 +0.6 123,098 - A4249_RS00665 0.18 +0.1 123,098 - A4249_RS00665 0.18 -0.4 123,098 - A4249_RS00665 0.18 -0.2 123,313 + A4249_RS00665 0.29 -0.2 123,313 + A4249_RS00665 0.29 +0.0 123,314 - A4249_RS00665 0.29 -0.2 123,314 - A4249_RS00665 0.29 -0.1 123,314 - A4249_RS00665 0.29 +0.1 123,314 - A4249_RS00665 0.29 +0.0 123,382 + A4249_RS00665 0.33 -0.4 123,382 + A4249_RS00665 0.33 -0.4 123,382 + A4249_RS00665 0.33 -0.0 123,382 + A4249_RS00665 0.33 -0.0 123,382 + A4249_RS00665 0.33 -0.4 123,382 + A4249_RS00665 0.33 +0.3 123,382 + A4249_RS00665 0.33 +0.3 123,383 - A4249_RS00665 0.33 -0.3 123,383 - A4249_RS00665 0.33 +0.6 123,383 - A4249_RS00665 0.33 -0.3 123,383 - A4249_RS00665 0.33 -1.1 123,383 - A4249_RS00665 0.33 +0.3 123,383 - A4249_RS00665 0.33 +0.1 123,383 - A4249_RS00665 0.33 -0.1 123,383 - A4249_RS00665 0.33 -0.0 123,383 - A4249_RS00665 0.33 +0.4 123,383 - A4249_RS00665 0.33 -0.2 123,383 - A4249_RS00665 0.33 +0.4 123,383 - A4249_RS00665 0.33 +0.7 123,383 - A4249_RS00665 0.33 -0.7 123,383 - A4249_RS00665 0.33 +0.2 123,574 + A4249_RS00665 0.42 -0.8 123,574 + A4249_RS00665 0.42 +0.4 123,574 + A4249_RS00665 0.42 -0.0 123,575 - A4249_RS00665 0.42 -0.3 123,575 - A4249_RS00665 0.42 -0.1 123,575 - A4249_RS00665 0.42 -0.3 123,575 - A4249_RS00665 0.42 +0.0 123,575 - A4249_RS00665 0.42 -0.4 123,575 - A4249_RS00665 0.42 -0.5 123,575 - A4249_RS00665 0.42 -0.5 123,575 - A4249_RS00665 0.42 -0.1
Or see this region's nucleotide sequence