Experiment: Uracil 0.8921 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS14760 and A4249_RS14765 are separated by 93 nucleotides A4249_RS14765 and A4249_RS14770 are separated by 50 nucleotides A4249_RS14770 and A4249_RS14775 are separated by 102 nucleotides A4249_RS14775 and A4249_RS14780 overlap by 4 nucleotides
A4249_RS14760: A4249_RS14760 - NAD-dependent succinate-semialdehyde dehydrogenase, at 2,989,424 to 2,990,878
_RS14760
A4249_RS14765: A4249_RS14765 - entericidin A/B family lipoprotein, at 2,990,972 to 2,991,109
_RS14765
A4249_RS14770: A4249_RS14770 - sensor histidine kinase, at 2,991,160 to 2,992,854
_RS14770
A4249_RS14775: A4249_RS14775 - sigma-70 family RNA polymerase sigma factor, at 2,992,957 to 2,993,568
_RS14775
A4249_RS14780: A4249_RS14780 - NepR family anti-sigma factor, at 2,993,565 to 2,993,765
_RS14780
Position (kb)
2991
2992
2993 Strain fitness (log2 ratio)
-2
-1
0
1 at 2990.283 kb on + strand, within A4249_RS14760 at 2990.283 kb on + strand, within A4249_RS14760 at 2990.284 kb on - strand, within A4249_RS14760 at 2990.284 kb on - strand, within A4249_RS14760 at 2990.445 kb on + strand, within A4249_RS14760 at 2990.445 kb on + strand, within A4249_RS14760 at 2990.445 kb on + strand, within A4249_RS14760 at 2990.538 kb on + strand, within A4249_RS14760 at 2990.538 kb on + strand, within A4249_RS14760 at 2990.539 kb on - strand, within A4249_RS14760 at 2990.890 kb on + strand at 2990.891 kb on - strand at 2990.891 kb on - strand at 2990.973 kb on + strand at 2990.974 kb on - strand at 2990.974 kb on - strand at 2990.974 kb on - strand at 2990.974 kb on - strand at 2991.109 kb on + strand at 2993.142 kb on - strand, within A4249_RS14775 at 2993.324 kb on + strand, within A4249_RS14775 at 2993.325 kb on - strand, within A4249_RS14775 at 2993.325 kb on - strand, within A4249_RS14775 at 2993.325 kb on - strand, within A4249_RS14775 at 2993.325 kb on - strand, within A4249_RS14775 at 2993.325 kb on - strand, within A4249_RS14775 at 2993.325 kb on - strand, within A4249_RS14775 at 2993.381 kb on + strand, within A4249_RS14775 at 2993.382 kb on - strand, within A4249_RS14775 at 2993.382 kb on - strand, within A4249_RS14775 at 2993.382 kb on - strand, within A4249_RS14775 at 2993.604 kb on + strand, within A4249_RS14780 at 2993.605 kb on - strand, within A4249_RS14780 at 2993.605 kb on - strand, within A4249_RS14780 at 2993.658 kb on - strand, within A4249_RS14780 at 2993.658 kb on - strand, within A4249_RS14780 at 2993.766 kb on - strand at 2993.766 kb on - strand at 2993.766 kb on - strand at 2993.766 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Uracil 0.8921 mM (C) remove 2,990,283 + A4249_RS14760 0.59 -0.7 2,990,283 + A4249_RS14760 0.59 +0.0 2,990,284 - A4249_RS14760 0.59 +0.5 2,990,284 - A4249_RS14760 0.59 +0.6 2,990,445 + A4249_RS14760 0.70 -0.2 2,990,445 + A4249_RS14760 0.70 -1.0 2,990,445 + A4249_RS14760 0.70 +0.4 2,990,538 + A4249_RS14760 0.77 -0.3 2,990,538 + A4249_RS14760 0.77 +0.5 2,990,539 - A4249_RS14760 0.77 -0.0 2,990,890 + -0.2 2,990,891 - +0.2 2,990,891 - -1.4 2,990,973 + -2.5 2,990,974 - -0.1 2,990,974 - -0.2 2,990,974 - -0.7 2,990,974 - -1.2 2,991,109 + -0.2 2,993,142 - A4249_RS14775 0.30 -0.1 2,993,324 + A4249_RS14775 0.60 -0.2 2,993,325 - A4249_RS14775 0.60 -0.1 2,993,325 - A4249_RS14775 0.60 -0.1 2,993,325 - A4249_RS14775 0.60 +0.2 2,993,325 - A4249_RS14775 0.60 +0.0 2,993,325 - A4249_RS14775 0.60 -0.2 2,993,325 - A4249_RS14775 0.60 -0.0 2,993,381 + A4249_RS14775 0.69 -0.1 2,993,382 - A4249_RS14775 0.69 +0.1 2,993,382 - A4249_RS14775 0.69 -0.3 2,993,382 - A4249_RS14775 0.69 +0.0 2,993,604 + A4249_RS14780 0.19 +1.3 2,993,605 - A4249_RS14780 0.20 -0.1 2,993,605 - A4249_RS14780 0.20 -0.1 2,993,658 - A4249_RS14780 0.46 -0.6 2,993,658 - A4249_RS14780 0.46 -0.5 2,993,766 - +0.1 2,993,766 - +1.1 2,993,766 - -0.2 2,993,766 - +0.2
Or see this region's nucleotide sequence