Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS14215

Experiment: Uracil 0.8921 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS14210 and A4249_RS14215 are separated by 22 nucleotidesA4249_RS14215 and A4249_RS14220 are separated by 312 nucleotidesA4249_RS14220 and A4249_RS14225 are separated by 6 nucleotides A4249_RS14210: A4249_RS14210 - ribonucleotide-diphosphate reductase subunit beta, at 2,863,414 to 2,864,463 _RS14210 A4249_RS14215: A4249_RS14215 - ester cyclase, at 2,864,486 to 2,864,902 _RS14215 A4249_RS14220: A4249_RS14220 - glutathione S-transferase family protein, at 2,865,215 to 2,865,850 _RS14220 A4249_RS14225: A4249_RS14225 - hypothetical protein, at 2,865,857 to 2,866,357 _RS14225 Position (kb) 2864 2865Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 2864.619 kb on - strand, within A4249_RS14215at 2864.658 kb on + strand, within A4249_RS14215at 2864.659 kb on - strand, within A4249_RS14215at 2864.659 kb on - strand, within A4249_RS14215at 2864.930 kb on + strandat 2864.953 kb on + strandat 2864.953 kb on + strandat 2864.953 kb on + strandat 2864.954 kb on - strandat 2864.975 kb on + strandat 2864.975 kb on + strandat 2864.975 kb on + strandat 2864.976 kb on - strandat 2865.036 kb on + strandat 2865.065 kb on - strandat 2865.076 kb on + strandat 2865.076 kb on + strandat 2865.076 kb on + strandat 2865.076 kb on + strandat 2865.076 kb on + strandat 2865.076 kb on + strandat 2865.077 kb on - strandat 2865.077 kb on - strandat 2865.077 kb on - strandat 2865.077 kb on - strandat 2865.077 kb on - strandat 2865.077 kb on - strandat 2865.077 kb on - strandat 2865.077 kb on - strandat 2865.077 kb on - strandat 2865.077 kb on - strandat 2865.077 kb on - strandat 2865.077 kb on - strandat 2865.077 kb on - strandat 2865.187 kb on + strandat 2865.187 kb on + strandat 2865.188 kb on - strandat 2865.188 kb on - strandat 2865.188 kb on - strandat 2865.236 kb on + strandat 2865.236 kb on + strandat 2865.237 kb on - strandat 2865.237 kb on - strandat 2865.237 kb on - strandat 2865.237 kb on - strandat 2865.299 kb on + strand, within A4249_RS14220at 2865.320 kb on + strand, within A4249_RS14220at 2865.320 kb on + strand, within A4249_RS14220at 2865.321 kb on - strand, within A4249_RS14220at 2865.344 kb on + strand, within A4249_RS14220at 2865.344 kb on + strand, within A4249_RS14220at 2865.344 kb on + strand, within A4249_RS14220at 2865.344 kb on + strand, within A4249_RS14220at 2865.345 kb on - strand, within A4249_RS14220at 2865.345 kb on - strand, within A4249_RS14220at 2865.428 kb on + strand, within A4249_RS14220at 2865.428 kb on + strand, within A4249_RS14220at 2865.428 kb on + strand, within A4249_RS14220at 2865.428 kb on + strand, within A4249_RS14220at 2865.429 kb on - strand, within A4249_RS14220at 2865.432 kb on + strand, within A4249_RS14220at 2865.432 kb on + strand, within A4249_RS14220at 2865.432 kb on + strand, within A4249_RS14220at 2865.432 kb on + strand, within A4249_RS14220at 2865.433 kb on - strand, within A4249_RS14220at 2865.433 kb on - strand, within A4249_RS14220at 2865.433 kb on - strand, within A4249_RS14220at 2865.433 kb on - strand, within A4249_RS14220at 2865.433 kb on - strand, within A4249_RS14220at 2865.433 kb on - strand, within A4249_RS14220at 2865.433 kb on - strand, within A4249_RS14220at 2865.433 kb on - strand, within A4249_RS14220at 2865.494 kb on + strand, within A4249_RS14220at 2865.494 kb on + strand, within A4249_RS14220at 2865.494 kb on + strand, within A4249_RS14220at 2865.494 kb on + strand, within A4249_RS14220at 2865.495 kb on - strand, within A4249_RS14220at 2865.495 kb on - strand, within A4249_RS14220at 2865.495 kb on - strand, within A4249_RS14220at 2865.495 kb on - strand, within A4249_RS14220at 2865.495 kb on - strand, within A4249_RS14220at 2865.495 kb on - strand, within A4249_RS14220at 2865.498 kb on - strand, within A4249_RS14220at 2865.498 kb on - strand, within A4249_RS14220at 2865.689 kb on + strand, within A4249_RS14220at 2865.689 kb on + strand, within A4249_RS14220at 2865.689 kb on + strand, within A4249_RS14220at 2865.689 kb on + strand, within A4249_RS14220at 2865.689 kb on + strand, within A4249_RS14220at 2865.689 kb on + strand, within A4249_RS14220at 2865.690 kb on - strand, within A4249_RS14220at 2865.690 kb on - strand, within A4249_RS14220at 2865.690 kb on - strand, within A4249_RS14220at 2865.690 kb on - strand, within A4249_RS14220at 2865.690 kb on - strand, within A4249_RS14220at 2865.759 kb on - strand, within A4249_RS14220at 2865.759 kb on - strand, within A4249_RS14220at 2865.759 kb on - strand, within A4249_RS14220at 2865.858 kb on + strandat 2865.859 kb on - strandat 2865.859 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Uracil 0.8921 mM (C)
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2,864,619 - A4249_RS14215 0.32 -1.4
2,864,658 + A4249_RS14215 0.41 -0.3
2,864,659 - A4249_RS14215 0.41 +0.3
2,864,659 - A4249_RS14215 0.41 -0.6
2,864,930 + -0.1
2,864,953 + +0.3
2,864,953 + +0.8
2,864,953 + -0.6
2,864,954 - -0.2
2,864,975 + -0.2
2,864,975 + +0.5
2,864,975 + +2.6
2,864,976 - +0.1
2,865,036 + +1.2
2,865,065 - -0.5
2,865,076 + +0.2
2,865,076 + +0.0
2,865,076 + -0.5
2,865,076 + +0.7
2,865,076 + -1.2
2,865,076 + -0.1
2,865,077 - -0.6
2,865,077 - -0.7
2,865,077 - -0.1
2,865,077 - +0.3
2,865,077 - +1.4
2,865,077 - +0.5
2,865,077 - +1.4
2,865,077 - +0.4
2,865,077 - -0.2
2,865,077 - +0.8
2,865,077 - -0.8
2,865,077 - -0.5
2,865,077 - +0.7
2,865,187 + +1.0
2,865,187 + -0.7
2,865,188 - -0.2
2,865,188 - -0.2
2,865,188 - +0.6
2,865,236 + -0.6
2,865,236 + -0.2
2,865,237 - +0.5
2,865,237 - -0.4
2,865,237 - -0.6
2,865,237 - +0.2
2,865,299 + A4249_RS14220 0.13 -0.5
2,865,320 + A4249_RS14220 0.17 +0.0
2,865,320 + A4249_RS14220 0.17 +0.2
2,865,321 - A4249_RS14220 0.17 -0.3
2,865,344 + A4249_RS14220 0.20 -0.3
2,865,344 + A4249_RS14220 0.20 -0.7
2,865,344 + A4249_RS14220 0.20 +0.0
2,865,344 + A4249_RS14220 0.20 -0.1
2,865,345 - A4249_RS14220 0.20 -0.1
2,865,345 - A4249_RS14220 0.20 -0.1
2,865,428 + A4249_RS14220 0.33 +0.5
2,865,428 + A4249_RS14220 0.33 +0.1
2,865,428 + A4249_RS14220 0.33 -0.5
2,865,428 + A4249_RS14220 0.33 +0.2
2,865,429 - A4249_RS14220 0.34 -0.3
2,865,432 + A4249_RS14220 0.34 -0.2
2,865,432 + A4249_RS14220 0.34 -0.2
2,865,432 + A4249_RS14220 0.34 +0.2
2,865,432 + A4249_RS14220 0.34 -1.1
2,865,433 - A4249_RS14220 0.34 -0.3
2,865,433 - A4249_RS14220 0.34 +0.2
2,865,433 - A4249_RS14220 0.34 +0.2
2,865,433 - A4249_RS14220 0.34 +0.1
2,865,433 - A4249_RS14220 0.34 -0.6
2,865,433 - A4249_RS14220 0.34 -0.3
2,865,433 - A4249_RS14220 0.34 +0.3
2,865,433 - A4249_RS14220 0.34 -0.1
2,865,494 + A4249_RS14220 0.44 -0.0
2,865,494 + A4249_RS14220 0.44 +0.2
2,865,494 + A4249_RS14220 0.44 -0.4
2,865,494 + A4249_RS14220 0.44 -0.9
2,865,495 - A4249_RS14220 0.44 +0.2
2,865,495 - A4249_RS14220 0.44 -1.3
2,865,495 - A4249_RS14220 0.44 -0.3
2,865,495 - A4249_RS14220 0.44 -0.2
2,865,495 - A4249_RS14220 0.44 -0.0
2,865,495 - A4249_RS14220 0.44 +0.0
2,865,498 - A4249_RS14220 0.44 -0.1
2,865,498 - A4249_RS14220 0.44 +0.2
2,865,689 + A4249_RS14220 0.75 -0.3
2,865,689 + A4249_RS14220 0.75 -0.2
2,865,689 + A4249_RS14220 0.75 +0.2
2,865,689 + A4249_RS14220 0.75 -0.2
2,865,689 + A4249_RS14220 0.75 -0.2
2,865,689 + A4249_RS14220 0.75 +0.5
2,865,690 - A4249_RS14220 0.75 -2.9
2,865,690 - A4249_RS14220 0.75 +0.5
2,865,690 - A4249_RS14220 0.75 +0.2
2,865,690 - A4249_RS14220 0.75 +1.3
2,865,690 - A4249_RS14220 0.75 -1.4
2,865,759 - A4249_RS14220 0.86 -0.0
2,865,759 - A4249_RS14220 0.86 -0.5
2,865,759 - A4249_RS14220 0.86 -0.1
2,865,858 + -0.3
2,865,859 - -1.1
2,865,859 - -0.2

Or see this region's nucleotide sequence