Experiment: Uracil 0.8921 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS10350 and A4249_RS10355 are separated by 63 nucleotides A4249_RS10355 and A4249_RS10360 are separated by 164 nucleotides A4249_RS10360 and A4249_RS10365 are separated by 79 nucleotides A4249_RS10365 and A4249_RS10370 overlap by 4 nucleotides
A4249_RS10350: A4249_RS10350 - hypothetical protein, at 2,076,746 to 2,077,414
_RS10350
A4249_RS10355: A4249_RS10355 - SufE family protein, at 2,077,478 to 2,077,915
_RS10355
A4249_RS10360: A4249_RS10360 - HAMP domain-containing sensor histidine kinase, at 2,078,080 to 2,079,789
_RS10360
A4249_RS10365: A4249_RS10365 - hypothetical protein, at 2,079,869 to 2,080,132
_RS10365
A4249_RS10370: A4249_RS10370 - hypothetical protein, at 2,080,129 to 2,080,989
_RS10370
Position (kb)
2078
2079
2080 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2077.134 kb on + strand, within A4249_RS10350 at 2077.134 kb on + strand, within A4249_RS10350 at 2077.134 kb on + strand, within A4249_RS10350 at 2077.134 kb on + strand, within A4249_RS10350 at 2077.134 kb on + strand, within A4249_RS10350 at 2077.134 kb on + strand, within A4249_RS10350 at 2077.135 kb on - strand, within A4249_RS10350 at 2077.135 kb on - strand, within A4249_RS10350 at 2077.135 kb on - strand, within A4249_RS10350 at 2077.135 kb on - strand, within A4249_RS10350 at 2077.135 kb on - strand, within A4249_RS10350 at 2077.293 kb on + strand, within A4249_RS10350 at 2077.293 kb on + strand, within A4249_RS10350 at 2077.293 kb on + strand, within A4249_RS10350 at 2077.294 kb on - strand, within A4249_RS10350 at 2077.294 kb on - strand, within A4249_RS10350 at 2077.344 kb on + strand, within A4249_RS10350 at 2077.344 kb on + strand, within A4249_RS10350 at 2077.344 kb on + strand, within A4249_RS10350 at 2077.344 kb on + strand, within A4249_RS10350 at 2077.344 kb on + strand, within A4249_RS10350 at 2077.345 kb on - strand, within A4249_RS10350 at 2077.345 kb on - strand, within A4249_RS10350 at 2077.479 kb on + strand at 2077.480 kb on - strand at 2077.480 kb on - strand at 2077.480 kb on - strand at 2077.927 kb on + strand at 2077.927 kb on + strand at 2077.927 kb on + strand at 2077.927 kb on + strand at 2077.927 kb on + strand at 2077.928 kb on - strand at 2077.972 kb on + strand at 2077.973 kb on - strand at 2078.043 kb on + strand at 2078.156 kb on + strand at 2078.157 kb on - strand at 2078.157 kb on - strand at 2078.157 kb on - strand at 2079.075 kb on + strand, within A4249_RS10360 at 2079.075 kb on + strand, within A4249_RS10360 at 2079.076 kb on - strand, within A4249_RS10360 at 2079.076 kb on - strand, within A4249_RS10360 at 2079.076 kb on - strand, within A4249_RS10360 at 2079.167 kb on - strand, within A4249_RS10360 at 2079.794 kb on + strand at 2079.794 kb on + strand at 2079.795 kb on - strand at 2079.795 kb on - strand at 2079.795 kb on - strand at 2079.828 kb on - strand at 2079.828 kb on - strand at 2079.828 kb on - strand at 2079.828 kb on - strand at 2079.835 kb on + strand at 2079.835 kb on + strand at 2079.835 kb on + strand at 2079.835 kb on + strand at 2079.835 kb on + strand at 2079.835 kb on + strand at 2079.836 kb on - strand at 2079.836 kb on - strand at 2079.836 kb on - strand at 2079.836 kb on - strand at 2079.836 kb on - strand at 2079.836 kb on - strand at 2079.868 kb on + strand at 2079.869 kb on - strand at 2080.050 kb on + strand, within A4249_RS10365 at 2080.051 kb on - strand, within A4249_RS10365 at 2080.051 kb on - strand, within A4249_RS10365 at 2080.130 kb on + strand at 2080.130 kb on + strand at 2080.130 kb on + strand at 2080.131 kb on - strand at 2080.131 kb on - strand at 2080.330 kb on - strand, within A4249_RS10370 at 2080.583 kb on + strand, within A4249_RS10370 at 2080.583 kb on + strand, within A4249_RS10370 at 2080.583 kb on + strand, within A4249_RS10370 at 2080.583 kb on + strand, within A4249_RS10370 at 2080.584 kb on - strand, within A4249_RS10370
Per-strain Table
Position Strand Gene LocusTag Fraction Uracil 0.8921 mM (C) remove 2,077,134 + A4249_RS10350 0.58 +0.5 2,077,134 + A4249_RS10350 0.58 +0.1 2,077,134 + A4249_RS10350 0.58 -0.1 2,077,134 + A4249_RS10350 0.58 +0.7 2,077,134 + A4249_RS10350 0.58 +0.6 2,077,134 + A4249_RS10350 0.58 +0.7 2,077,135 - A4249_RS10350 0.58 +1.8 2,077,135 - A4249_RS10350 0.58 +0.1 2,077,135 - A4249_RS10350 0.58 -0.4 2,077,135 - A4249_RS10350 0.58 -0.1 2,077,135 - A4249_RS10350 0.58 -0.6 2,077,293 + A4249_RS10350 0.82 -0.1 2,077,293 + A4249_RS10350 0.82 -0.2 2,077,293 + A4249_RS10350 0.82 +0.4 2,077,294 - A4249_RS10350 0.82 -0.9 2,077,294 - A4249_RS10350 0.82 +0.3 2,077,344 + A4249_RS10350 0.89 -0.0 2,077,344 + A4249_RS10350 0.89 -0.3 2,077,344 + A4249_RS10350 0.89 +0.1 2,077,344 + A4249_RS10350 0.89 +0.7 2,077,344 + A4249_RS10350 0.89 +1.0 2,077,345 - A4249_RS10350 0.90 -0.7 2,077,345 - A4249_RS10350 0.90 +0.3 2,077,479 + -0.2 2,077,480 - +0.8 2,077,480 - +0.5 2,077,480 - +0.0 2,077,927 + +0.3 2,077,927 + -0.3 2,077,927 + -0.0 2,077,927 + +0.3 2,077,927 + -0.2 2,077,928 - -0.8 2,077,972 + +0.1 2,077,973 - -0.6 2,078,043 + -0.7 2,078,156 + +0.7 2,078,157 - -0.9 2,078,157 - +0.6 2,078,157 - +0.3 2,079,075 + A4249_RS10360 0.58 +0.2 2,079,075 + A4249_RS10360 0.58 -1.0 2,079,076 - A4249_RS10360 0.58 +0.5 2,079,076 - A4249_RS10360 0.58 +0.9 2,079,076 - A4249_RS10360 0.58 -0.7 2,079,167 - A4249_RS10360 0.64 -0.6 2,079,794 + +0.0 2,079,794 + -0.8 2,079,795 - +0.2 2,079,795 - -0.1 2,079,795 - +0.3 2,079,828 - +1.1 2,079,828 - +1.0 2,079,828 - +0.2 2,079,828 - -0.1 2,079,835 + +0.0 2,079,835 + -0.2 2,079,835 + -0.1 2,079,835 + -0.1 2,079,835 + -1.5 2,079,835 + -0.1 2,079,836 - +0.1 2,079,836 - -2.1 2,079,836 - -1.0 2,079,836 - -0.3 2,079,836 - -0.2 2,079,836 - +0.4 2,079,868 + -1.1 2,079,869 - -0.2 2,080,050 + A4249_RS10365 0.69 +1.0 2,080,051 - A4249_RS10365 0.69 +0.6 2,080,051 - A4249_RS10365 0.69 -0.5 2,080,130 + -0.5 2,080,130 + -0.1 2,080,130 + -0.3 2,080,131 - +0.2 2,080,131 - +0.3 2,080,330 - A4249_RS10370 0.23 +0.2 2,080,583 + A4249_RS10370 0.53 +1.0 2,080,583 + A4249_RS10370 0.53 +0.2 2,080,583 + A4249_RS10370 0.53 +0.0 2,080,583 + A4249_RS10370 0.53 -0.2 2,080,584 - A4249_RS10370 0.53 -0.1
Or see this region's nucleotide sequence