Experiment: Uracil 0.8921 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS04185 and A4249_RS04190 are separated by 40 nucleotides A4249_RS04190 and A4249_RS04195 are separated by 50 nucleotides A4249_RS04195 and A4249_RS04200 are separated by 12 nucleotides A4249_RS04200 and A4249_RS04205 are separated by 23 nucleotides A4249_RS04205 and A4249_RS04210 are separated by 29 nucleotides
A4249_RS04185: A4249_RS04185 - nitronate monooxygenase, at 867,777 to 868,823
_RS04185
A4249_RS04190: A4249_RS04190 - MliC family protein, at 868,864 to 869,289
_RS04190
A4249_RS04195: A4249_RS04195 - tRNA adenosine(34) deaminase TadA, at 869,340 to 869,798
_RS04195
A4249_RS04200: A4249_RS04200 - pseudouridine synthase, at 869,811 to 871,364
_RS04200
A4249_RS04205: A4249_RS04205 - GFA family protein, at 871,388 to 871,798
_RS04205
A4249_RS04210: A4249_RS04210 - TMEM175 family protein, at 871,828 to 872,469
_RS04210
Position (kb) 869
870
871
872 Strain fitness (log2 ratio) -2
-1
0
1 at 868.834 kb on + strand at 868.834 kb on + strand at 868.834 kb on + strand at 868.834 kb on + strand at 868.834 kb on + strand at 868.834 kb on + strand at 868.834 kb on + strand at 868.834 kb on + strand at 868.834 kb on + strand at 868.834 kb on + strand at 868.834 kb on + strand at 868.834 kb on + strand at 868.834 kb on + strand at 868.834 kb on + strand at 868.835 kb on - strand at 868.835 kb on - strand at 868.835 kb on - strand at 868.835 kb on - strand at 868.835 kb on - strand at 868.835 kb on - strand at 868.835 kb on - strand at 868.835 kb on - strand at 868.835 kb on - strand at 868.835 kb on - strand at 868.835 kb on - strand at 868.835 kb on - strand at 869.084 kb on + strand, within A4249_RS04190 at 869.084 kb on + strand, within A4249_RS04190 at 869.085 kb on - strand, within A4249_RS04190 at 869.085 kb on - strand, within A4249_RS04190 at 869.246 kb on - strand, within A4249_RS04190 at 869.341 kb on + strand at 869.341 kb on + strand at 869.341 kb on + strand at 869.342 kb on - strand at 869.342 kb on - strand at 869.823 kb on - strand at 869.882 kb on + strand at 870.323 kb on + strand, within A4249_RS04200 at 870.492 kb on + strand, within A4249_RS04200 at 870.573 kb on + strand, within A4249_RS04200 at 870.573 kb on + strand, within A4249_RS04200 at 870.573 kb on + strand, within A4249_RS04200 at 870.574 kb on - strand, within A4249_RS04200 at 870.744 kb on + strand, within A4249_RS04200 at 870.828 kb on + strand, within A4249_RS04200 at 870.828 kb on + strand, within A4249_RS04200 at 870.828 kb on + strand, within A4249_RS04200 at 870.828 kb on + strand, within A4249_RS04200 at 870.829 kb on - strand, within A4249_RS04200 at 870.829 kb on - strand, within A4249_RS04200 at 870.829 kb on - strand, within A4249_RS04200 at 870.830 kb on + strand, within A4249_RS04200 at 870.830 kb on + strand, within A4249_RS04200 at 870.831 kb on - strand, within A4249_RS04200 at 870.860 kb on + strand, within A4249_RS04200 at 870.860 kb on + strand, within A4249_RS04200 at 870.860 kb on + strand, within A4249_RS04200 at 870.861 kb on - strand, within A4249_RS04200 at 870.861 kb on - strand, within A4249_RS04200 at 871.556 kb on + strand, within A4249_RS04205 at 871.556 kb on + strand, within A4249_RS04205 at 871.556 kb on + strand, within A4249_RS04205 at 871.556 kb on + strand, within A4249_RS04205 at 871.556 kb on + strand, within A4249_RS04205 at 871.556 kb on + strand, within A4249_RS04205 at 871.556 kb on + strand, within A4249_RS04205 at 871.556 kb on + strand, within A4249_RS04205 at 871.556 kb on + strand, within A4249_RS04205 at 871.556 kb on + strand, within A4249_RS04205 at 871.556 kb on + strand, within A4249_RS04205 at 871.556 kb on + strand, within A4249_RS04205 at 871.557 kb on - strand, within A4249_RS04205 at 871.557 kb on - strand, within A4249_RS04205 at 871.557 kb on - strand, within A4249_RS04205 at 871.557 kb on - strand, within A4249_RS04205 at 871.557 kb on - strand, within A4249_RS04205 at 871.557 kb on - strand, within A4249_RS04205 at 871.557 kb on - strand, within A4249_RS04205 at 871.557 kb on - strand, within A4249_RS04205 at 871.557 kb on - strand, within A4249_RS04205 at 871.557 kb on - strand, within A4249_RS04205 at 871.557 kb on - strand, within A4249_RS04205 at 871.557 kb on - strand, within A4249_RS04205 at 871.557 kb on - strand, within A4249_RS04205 at 871.557 kb on - strand, within A4249_RS04205 at 871.724 kb on + strand, within A4249_RS04205 at 871.724 kb on + strand, within A4249_RS04205 at 871.724 kb on + strand, within A4249_RS04205 at 871.724 kb on + strand, within A4249_RS04205 at 871.724 kb on + strand, within A4249_RS04205 at 871.725 kb on - strand, within A4249_RS04205 at 871.725 kb on - strand, within A4249_RS04205 at 871.725 kb on - strand, within A4249_RS04205 at 872.162 kb on - strand, within A4249_RS04210 at 872.162 kb on - strand, within A4249_RS04210 at 872.197 kb on + strand, within A4249_RS04210 at 872.197 kb on + strand, within A4249_RS04210 at 872.197 kb on + strand, within A4249_RS04210 at 872.197 kb on + strand, within A4249_RS04210 at 872.197 kb on + strand, within A4249_RS04210 at 872.197 kb on + strand, within A4249_RS04210 at 872.198 kb on - strand, within A4249_RS04210 at 872.198 kb on - strand, within A4249_RS04210 at 872.198 kb on - strand, within A4249_RS04210 at 872.198 kb on - strand, within A4249_RS04210 at 872.198 kb on - strand, within A4249_RS04210 at 872.242 kb on + strand, within A4249_RS04210 at 872.242 kb on + strand, within A4249_RS04210
Per-strain Table
Position Strand Gene LocusTag Fraction Uracil 0.8921 mM (C) remove 868,834 + +0.3 868,834 + -0.1 868,834 + -0.2 868,834 + +0.1 868,834 + +0.8 868,834 + -0.4 868,834 + -0.1 868,834 + -0.6 868,834 + -0.0 868,834 + +0.0 868,834 + +0.5 868,834 + +0.2 868,834 + -0.7 868,834 + +0.4 868,835 - -0.5 868,835 - -0.1 868,835 - +0.6 868,835 - +0.3 868,835 - -0.0 868,835 - +0.0 868,835 - -0.1 868,835 - -0.8 868,835 - -0.2 868,835 - -0.2 868,835 - +0.2 868,835 - +0.1 869,084 + A4249_RS04190 0.52 -0.8 869,084 + A4249_RS04190 0.52 -0.2 869,085 - A4249_RS04190 0.52 -0.0 869,085 - A4249_RS04190 0.52 -0.9 869,246 - A4249_RS04190 0.90 -0.3 869,341 + -0.4 869,341 + -0.7 869,341 + -0.4 869,342 - +0.0 869,342 - +0.8 869,823 - -2.2 869,882 + -0.8 870,323 + A4249_RS04200 0.33 -1.2 870,492 + A4249_RS04200 0.44 +0.7 870,573 + A4249_RS04200 0.49 -0.2 870,573 + A4249_RS04200 0.49 -0.4 870,573 + A4249_RS04200 0.49 -0.0 870,574 - A4249_RS04200 0.49 -0.0 870,744 + A4249_RS04200 0.60 +1.3 870,828 + A4249_RS04200 0.65 +0.1 870,828 + A4249_RS04200 0.65 -0.6 870,828 + A4249_RS04200 0.65 -0.0 870,828 + A4249_RS04200 0.65 +0.6 870,829 - A4249_RS04200 0.66 -0.4 870,829 - A4249_RS04200 0.66 -1.6 870,829 - A4249_RS04200 0.66 -0.4 870,830 + A4249_RS04200 0.66 +0.2 870,830 + A4249_RS04200 0.66 -0.5 870,831 - A4249_RS04200 0.66 -0.1 870,860 + A4249_RS04200 0.68 -0.5 870,860 + A4249_RS04200 0.68 -1.4 870,860 + A4249_RS04200 0.68 -0.1 870,861 - A4249_RS04200 0.68 +0.3 870,861 - A4249_RS04200 0.68 -1.1 871,556 + A4249_RS04205 0.41 -1.1 871,556 + A4249_RS04205 0.41 -0.0 871,556 + A4249_RS04205 0.41 -0.3 871,556 + A4249_RS04205 0.41 +0.4 871,556 + A4249_RS04205 0.41 +0.1 871,556 + A4249_RS04205 0.41 -0.3 871,556 + A4249_RS04205 0.41 +0.8 871,556 + A4249_RS04205 0.41 -0.6 871,556 + A4249_RS04205 0.41 -0.6 871,556 + A4249_RS04205 0.41 -0.1 871,556 + A4249_RS04205 0.41 -0.1 871,556 + A4249_RS04205 0.41 +0.3 871,557 - A4249_RS04205 0.41 +0.2 871,557 - A4249_RS04205 0.41 -0.5 871,557 - A4249_RS04205 0.41 -0.1 871,557 - A4249_RS04205 0.41 -0.8 871,557 - A4249_RS04205 0.41 -0.4 871,557 - A4249_RS04205 0.41 -0.0 871,557 - A4249_RS04205 0.41 +0.6 871,557 - A4249_RS04205 0.41 -0.0 871,557 - A4249_RS04205 0.41 +0.6 871,557 - A4249_RS04205 0.41 -1.3 871,557 - A4249_RS04205 0.41 -0.3 871,557 - A4249_RS04205 0.41 +0.0 871,557 - A4249_RS04205 0.41 +0.1 871,557 - A4249_RS04205 0.41 -0.9 871,724 + A4249_RS04205 0.82 -0.7 871,724 + A4249_RS04205 0.82 +0.3 871,724 + A4249_RS04205 0.82 -0.7 871,724 + A4249_RS04205 0.82 -1.2 871,724 + A4249_RS04205 0.82 +0.1 871,725 - A4249_RS04205 0.82 +0.1 871,725 - A4249_RS04205 0.82 -0.3 871,725 - A4249_RS04205 0.82 -0.3 872,162 - A4249_RS04210 0.52 +0.8 872,162 - A4249_RS04210 0.52 +0.6 872,197 + A4249_RS04210 0.57 -1.2 872,197 + A4249_RS04210 0.57 -0.8 872,197 + A4249_RS04210 0.57 +0.0 872,197 + A4249_RS04210 0.57 +0.3 872,197 + A4249_RS04210 0.57 -0.9 872,197 + A4249_RS04210 0.57 -0.5 872,198 - A4249_RS04210 0.58 -0.2 872,198 - A4249_RS04210 0.58 -0.5 872,198 - A4249_RS04210 0.58 -0.2 872,198 - A4249_RS04210 0.58 -1.2 872,198 - A4249_RS04210 0.58 +1.2 872,242 + A4249_RS04210 0.64 -0.1 872,242 + A4249_RS04210 0.64 +0.6
Or see this region's nucleotide sequence