Experiment: Uracil 0.8921 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS04035 and A4249_RS04040 are separated by 104 nucleotides A4249_RS04040 and A4249_RS04045 are separated by 89 nucleotides A4249_RS04045 and A4249_RS04050 are separated by 189 nucleotides
A4249_RS04035: A4249_RS04035 - DNA-directed RNA polymerase subunit alpha, at 837,028 to 838,047
_RS04035
A4249_RS04040: A4249_RS04040 - 50S ribosomal protein L17, at 838,152 to 838,571
_RS04040
A4249_RS04045: A4249_RS04045 - GNAT family N-acetyltransferase, at 838,661 to 839,119
_RS04045
A4249_RS04050: A4249_RS04050 - LysR substrate-binding domain-containing protein, at 839,309 to 840,226
_RS04050
Position (kb) 838
839
840 Strain fitness (log2 ratio) -1
0
1 at 838.569 kb on + strand at 838.569 kb on + strand at 838.569 kb on + strand at 838.569 kb on + strand at 838.570 kb on - strand at 838.994 kb on + strand, within A4249_RS04045 at 838.995 kb on - strand, within A4249_RS04045 at 838.995 kb on - strand, within A4249_RS04045 at 838.995 kb on - strand, within A4249_RS04045 at 838.995 kb on - strand, within A4249_RS04045 at 838.995 kb on - strand, within A4249_RS04045 at 838.995 kb on - strand, within A4249_RS04045 at 838.995 kb on - strand, within A4249_RS04045 at 838.995 kb on - strand, within A4249_RS04045 at 839.036 kb on + strand, within A4249_RS04045 at 839.036 kb on + strand, within A4249_RS04045 at 839.037 kb on - strand, within A4249_RS04045 at 839.037 kb on - strand, within A4249_RS04045 at 839.118 kb on - strand at 839.118 kb on - strand at 839.118 kb on - strand at 839.152 kb on + strand at 839.152 kb on + strand at 839.152 kb on + strand at 839.153 kb on - strand at 839.153 kb on - strand at 839.277 kb on + strand at 839.491 kb on + strand, within A4249_RS04050 at 839.491 kb on + strand, within A4249_RS04050 at 839.491 kb on + strand, within A4249_RS04050 at 839.491 kb on + strand, within A4249_RS04050 at 839.492 kb on - strand, within A4249_RS04050 at 839.492 kb on - strand, within A4249_RS04050 at 839.492 kb on - strand, within A4249_RS04050 at 839.699 kb on + strand, within A4249_RS04050 at 839.700 kb on - strand, within A4249_RS04050 at 839.862 kb on + strand, within A4249_RS04050 at 839.862 kb on + strand, within A4249_RS04050 at 839.862 kb on + strand, within A4249_RS04050 at 839.863 kb on - strand, within A4249_RS04050 at 839.863 kb on - strand, within A4249_RS04050 at 840.051 kb on + strand, within A4249_RS04050 at 840.051 kb on + strand, within A4249_RS04050 at 840.051 kb on + strand, within A4249_RS04050 at 840.052 kb on - strand, within A4249_RS04050 at 840.052 kb on - strand, within A4249_RS04050 at 840.052 kb on - strand, within A4249_RS04050 at 840.052 kb on - strand, within A4249_RS04050
Per-strain Table
Position Strand Gene LocusTag Fraction Uracil 0.8921 mM (C) remove 838,569 + -0.4 838,569 + +0.8 838,569 + -0.2 838,569 + +0.1 838,570 - +0.3 838,994 + A4249_RS04045 0.73 -0.7 838,995 - A4249_RS04045 0.73 -0.4 838,995 - A4249_RS04045 0.73 -0.1 838,995 - A4249_RS04045 0.73 -0.5 838,995 - A4249_RS04045 0.73 -0.2 838,995 - A4249_RS04045 0.73 +0.3 838,995 - A4249_RS04045 0.73 +0.3 838,995 - A4249_RS04045 0.73 -0.1 838,995 - A4249_RS04045 0.73 -0.9 839,036 + A4249_RS04045 0.82 -0.5 839,036 + A4249_RS04045 0.82 -0.9 839,037 - A4249_RS04045 0.82 -1.0 839,037 - A4249_RS04045 0.82 -0.5 839,118 - -0.4 839,118 - -0.1 839,118 - -0.8 839,152 + +0.2 839,152 + -0.1 839,152 + +0.1 839,153 - -0.3 839,153 - +0.2 839,277 + -0.7 839,491 + A4249_RS04050 0.20 -0.0 839,491 + A4249_RS04050 0.20 -0.3 839,491 + A4249_RS04050 0.20 +0.8 839,491 + A4249_RS04050 0.20 +0.4 839,492 - A4249_RS04050 0.20 +0.4 839,492 - A4249_RS04050 0.20 -0.1 839,492 - A4249_RS04050 0.20 -0.0 839,699 + A4249_RS04050 0.42 -0.4 839,700 - A4249_RS04050 0.43 +1.1 839,862 + A4249_RS04050 0.60 +0.2 839,862 + A4249_RS04050 0.60 -0.1 839,862 + A4249_RS04050 0.60 +1.4 839,863 - A4249_RS04050 0.60 -0.1 839,863 - A4249_RS04050 0.60 -0.5 840,051 + A4249_RS04050 0.81 +0.3 840,051 + A4249_RS04050 0.81 -0.4 840,051 + A4249_RS04050 0.81 -0.5 840,052 - A4249_RS04050 0.81 +0.9 840,052 - A4249_RS04050 0.81 +0.1 840,052 - A4249_RS04050 0.81 +0.3 840,052 - A4249_RS04050 0.81 -0.5
Or see this region's nucleotide sequence