Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS03465

Experiment: Uracil 0.8921 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS03460 and A4249_RS03465 overlap by 14 nucleotidesA4249_RS03465 and A4249_RS03470 are separated by 141 nucleotidesA4249_RS03470 and A4249_RS03475 overlap by 14 nucleotides A4249_RS03460: A4249_RS03460 - glycoside hydrolase family 65 protein, at 721,421 to 723,493 _RS03460 A4249_RS03465: A4249_RS03465 - hypothetical protein, at 723,480 to 723,887 _RS03465 A4249_RS03470: A4249_RS03470 - hypothetical protein, at 724,029 to 724,214 _RS03470 A4249_RS03475: A4249_RS03475 - glutathione-dependent formaldehyde dehydrogenase, at 724,201 to 725,376 _RS03475 Position (kb) 723 724Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 722.517 kb on + strand, within A4249_RS03460at 722.517 kb on + strand, within A4249_RS03460at 722.517 kb on + strand, within A4249_RS03460at 722.517 kb on + strand, within A4249_RS03460at 722.518 kb on - strand, within A4249_RS03460at 722.520 kb on + strand, within A4249_RS03460at 722.521 kb on - strand, within A4249_RS03460at 722.521 kb on - strand, within A4249_RS03460at 722.526 kb on + strand, within A4249_RS03460at 722.526 kb on + strand, within A4249_RS03460at 722.526 kb on + strand, within A4249_RS03460at 722.526 kb on + strand, within A4249_RS03460at 722.526 kb on + strand, within A4249_RS03460at 722.526 kb on + strand, within A4249_RS03460at 722.526 kb on + strand, within A4249_RS03460at 722.526 kb on + strand, within A4249_RS03460at 722.526 kb on + strand, within A4249_RS03460at 722.527 kb on - strand, within A4249_RS03460at 722.527 kb on - strand, within A4249_RS03460at 722.527 kb on - strand, within A4249_RS03460at 722.527 kb on - strand, within A4249_RS03460at 722.527 kb on - strand, within A4249_RS03460at 722.527 kb on - strand, within A4249_RS03460at 722.527 kb on - strand, within A4249_RS03460at 722.527 kb on - strand, within A4249_RS03460at 722.527 kb on - strand, within A4249_RS03460at 722.527 kb on - strand, within A4249_RS03460at 722.527 kb on - strand, within A4249_RS03460at 722.527 kb on - strand, within A4249_RS03460at 722.527 kb on - strand, within A4249_RS03460at 722.598 kb on + strand, within A4249_RS03460at 722.598 kb on + strand, within A4249_RS03460at 722.598 kb on + strand, within A4249_RS03460at 722.599 kb on - strand, within A4249_RS03460at 722.599 kb on - strand, within A4249_RS03460at 722.831 kb on + strand, within A4249_RS03460at 722.831 kb on + strand, within A4249_RS03460at 722.832 kb on - strand, within A4249_RS03460at 722.838 kb on + strand, within A4249_RS03460at 722.838 kb on + strand, within A4249_RS03460at 722.839 kb on - strand, within A4249_RS03460at 723.027 kb on - strand, within A4249_RS03460at 723.027 kb on - strand, within A4249_RS03460at 723.210 kb on + strand, within A4249_RS03460at 723.210 kb on + strand, within A4249_RS03460at 723.210 kb on + strand, within A4249_RS03460at 723.211 kb on - strand, within A4249_RS03460at 723.211 kb on - strand, within A4249_RS03460at 723.211 kb on - strand, within A4249_RS03460at 723.211 kb on - strand, within A4249_RS03460at 723.417 kb on + strandat 723.417 kb on + strandat 723.417 kb on + strandat 723.417 kb on + strandat 723.417 kb on + strandat 723.417 kb on + strandat 723.417 kb on + strandat 723.417 kb on + strandat 723.417 kb on + strandat 723.417 kb on + strandat 723.417 kb on + strandat 723.417 kb on + strandat 723.417 kb on + strandat 723.418 kb on - strandat 723.418 kb on - strandat 723.418 kb on - strandat 723.418 kb on - strandat 723.418 kb on - strandat 723.418 kb on - strandat 723.418 kb on - strandat 723.418 kb on - strandat 723.494 kb on - strandat 723.658 kb on + strand, within A4249_RS03465at 723.658 kb on + strand, within A4249_RS03465at 723.659 kb on - strand, within A4249_RS03465at 723.659 kb on - strand, within A4249_RS03465at 723.659 kb on - strand, within A4249_RS03465at 723.659 kb on - strand, within A4249_RS03465at 723.667 kb on + strand, within A4249_RS03465at 723.667 kb on + strand, within A4249_RS03465at 723.667 kb on + strand, within A4249_RS03465at 723.668 kb on - strand, within A4249_RS03465at 723.668 kb on - strand, within A4249_RS03465at 723.668 kb on - strand, within A4249_RS03465at 723.751 kb on + strand, within A4249_RS03465at 723.751 kb on + strand, within A4249_RS03465at 723.751 kb on + strand, within A4249_RS03465at 723.751 kb on + strand, within A4249_RS03465at 723.751 kb on + strand, within A4249_RS03465at 723.751 kb on + strand, within A4249_RS03465at 723.752 kb on - strand, within A4249_RS03465at 723.752 kb on - strand, within A4249_RS03465at 723.752 kb on - strand, within A4249_RS03465at 723.752 kb on - strand, within A4249_RS03465at 723.752 kb on - strand, within A4249_RS03465at 723.805 kb on + strand, within A4249_RS03465at 723.805 kb on + strand, within A4249_RS03465at 723.805 kb on + strand, within A4249_RS03465at 723.805 kb on + strand, within A4249_RS03465at 723.868 kb on + strandat 723.868 kb on + strandat 723.868 kb on + strandat 723.869 kb on - strandat 723.875 kb on - strandat 723.875 kb on - strandat 724.007 kb on + strandat 724.007 kb on + strandat 724.007 kb on + strandat 724.008 kb on - strandat 724.008 kb on - strandat 724.113 kb on + strand, within A4249_RS03470at 724.113 kb on + strand, within A4249_RS03470at 724.113 kb on + strand, within A4249_RS03470at 724.113 kb on + strand, within A4249_RS03470at 724.113 kb on + strand, within A4249_RS03470at 724.113 kb on + strand, within A4249_RS03470at 724.113 kb on + strand, within A4249_RS03470at 724.113 kb on + strand, within A4249_RS03470at 724.113 kb on + strand, within A4249_RS03470at 724.114 kb on - strand, within A4249_RS03470at 724.114 kb on - strand, within A4249_RS03470at 724.114 kb on - strand, within A4249_RS03470at 724.114 kb on - strand, within A4249_RS03470at 724.114 kb on - strand, within A4249_RS03470at 724.114 kb on - strand, within A4249_RS03470at 724.114 kb on - strand, within A4249_RS03470at 724.114 kb on - strand, within A4249_RS03470at 724.114 kb on - strand, within A4249_RS03470at 724.114 kb on - strand, within A4249_RS03470at 724.259 kb on + strandat 724.259 kb on + strandat 724.259 kb on + strandat 724.259 kb on + strandat 724.260 kb on - strandat 724.260 kb on - strandat 724.260 kb on - strandat 724.260 kb on - strandat 724.355 kb on + strand, within A4249_RS03475at 724.356 kb on - strand, within A4249_RS03475at 724.442 kb on + strand, within A4249_RS03475at 724.442 kb on + strand, within A4249_RS03475at 724.443 kb on - strand, within A4249_RS03475at 724.443 kb on - strand, within A4249_RS03475at 724.443 kb on - strand, within A4249_RS03475at 724.443 kb on - strand, within A4249_RS03475at 724.464 kb on + strand, within A4249_RS03475at 724.464 kb on + strand, within A4249_RS03475at 724.464 kb on + strand, within A4249_RS03475at 724.465 kb on - strand, within A4249_RS03475at 724.465 kb on - strand, within A4249_RS03475at 724.465 kb on - strand, within A4249_RS03475at 724.465 kb on - strand, within A4249_RS03475at 724.465 kb on - strand, within A4249_RS03475at 724.465 kb on - strand, within A4249_RS03475at 724.554 kb on + strand, within A4249_RS03475at 724.554 kb on + strand, within A4249_RS03475at 724.554 kb on + strand, within A4249_RS03475at 724.555 kb on - strand, within A4249_RS03475at 724.664 kb on + strand, within A4249_RS03475at 724.664 kb on + strand, within A4249_RS03475at 724.664 kb on + strand, within A4249_RS03475at 724.664 kb on + strand, within A4249_RS03475at 724.665 kb on - strand, within A4249_RS03475at 724.665 kb on - strand, within A4249_RS03475at 724.665 kb on - strand, within A4249_RS03475at 724.665 kb on - strand, within A4249_RS03475at 724.665 kb on - strand, within A4249_RS03475at 724.665 kb on - strand, within A4249_RS03475at 724.665 kb on - strand, within A4249_RS03475at 724.665 kb on - strand, within A4249_RS03475at 724.665 kb on - strand, within A4249_RS03475at 724.861 kb on + strand, within A4249_RS03475at 724.861 kb on + strand, within A4249_RS03475at 724.861 kb on + strand, within A4249_RS03475at 724.862 kb on - strand, within A4249_RS03475

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Per-strain Table

Position Strand Gene LocusTag Fraction Uracil 0.8921 mM (C)
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722,517 + A4249_RS03460 0.53 -0.2
722,517 + A4249_RS03460 0.53 +1.4
722,517 + A4249_RS03460 0.53 -0.2
722,517 + A4249_RS03460 0.53 +0.4
722,518 - A4249_RS03460 0.53 -0.3
722,520 + A4249_RS03460 0.53 -0.2
722,521 - A4249_RS03460 0.53 -2.3
722,521 - A4249_RS03460 0.53 +0.4
722,526 + A4249_RS03460 0.53 -0.3
722,526 + A4249_RS03460 0.53 -0.3
722,526 + A4249_RS03460 0.53 +0.1
722,526 + A4249_RS03460 0.53 +0.9
722,526 + A4249_RS03460 0.53 +0.7
722,526 + A4249_RS03460 0.53 -0.8
722,526 + A4249_RS03460 0.53 +1.8
722,526 + A4249_RS03460 0.53 -0.1
722,526 + A4249_RS03460 0.53 +0.4
722,527 - A4249_RS03460 0.53 -0.4
722,527 - A4249_RS03460 0.53 -0.5
722,527 - A4249_RS03460 0.53 +0.1
722,527 - A4249_RS03460 0.53 +1.2
722,527 - A4249_RS03460 0.53 +0.5
722,527 - A4249_RS03460 0.53 -0.1
722,527 - A4249_RS03460 0.53 -0.7
722,527 - A4249_RS03460 0.53 -0.0
722,527 - A4249_RS03460 0.53 +0.2
722,527 - A4249_RS03460 0.53 +0.1
722,527 - A4249_RS03460 0.53 -1.9
722,527 - A4249_RS03460 0.53 +0.2
722,527 - A4249_RS03460 0.53 -0.2
722,598 + A4249_RS03460 0.57 -2.7
722,598 + A4249_RS03460 0.57 -0.2
722,598 + A4249_RS03460 0.57 +0.0
722,599 - A4249_RS03460 0.57 +0.0
722,599 - A4249_RS03460 0.57 +0.3
722,831 + A4249_RS03460 0.68 -2.9
722,831 + A4249_RS03460 0.68 -1.7
722,832 - A4249_RS03460 0.68 -0.3
722,838 + A4249_RS03460 0.68 +0.5
722,838 + A4249_RS03460 0.68 -0.3
722,839 - A4249_RS03460 0.68 +0.3
723,027 - A4249_RS03460 0.77 +0.8
723,027 - A4249_RS03460 0.77 +0.1
723,210 + A4249_RS03460 0.86 +0.5
723,210 + A4249_RS03460 0.86 -0.5
723,210 + A4249_RS03460 0.86 -0.6
723,211 - A4249_RS03460 0.86 -0.3
723,211 - A4249_RS03460 0.86 -0.6
723,211 - A4249_RS03460 0.86 -1.0
723,211 - A4249_RS03460 0.86 +0.2
723,417 + +0.1
723,417 + +0.1
723,417 + -0.6
723,417 + -0.2
723,417 + -0.3
723,417 + -0.7
723,417 + -0.4
723,417 + +0.1
723,417 + -0.1
723,417 + -0.9
723,417 + +0.2
723,417 + +0.6
723,417 + +0.3
723,418 - +0.1
723,418 - -1.8
723,418 - -0.7
723,418 - -0.8
723,418 - +1.6
723,418 - -0.2
723,418 - +0.4
723,418 - -0.1
723,494 - -0.4
723,658 + A4249_RS03465 0.44 +0.1
723,658 + A4249_RS03465 0.44 -0.2
723,659 - A4249_RS03465 0.44 +0.7
723,659 - A4249_RS03465 0.44 -0.4
723,659 - A4249_RS03465 0.44 -0.4
723,659 - A4249_RS03465 0.44 -0.0
723,667 + A4249_RS03465 0.46 -1.0
723,667 + A4249_RS03465 0.46 -0.3
723,667 + A4249_RS03465 0.46 -0.4
723,668 - A4249_RS03465 0.46 -0.2
723,668 - A4249_RS03465 0.46 -2.0
723,668 - A4249_RS03465 0.46 -0.6
723,751 + A4249_RS03465 0.66 -0.0
723,751 + A4249_RS03465 0.66 -0.2
723,751 + A4249_RS03465 0.66 -0.5
723,751 + A4249_RS03465 0.66 -0.4
723,751 + A4249_RS03465 0.66 +1.3
723,751 + A4249_RS03465 0.66 -0.2
723,752 - A4249_RS03465 0.67 +1.4
723,752 - A4249_RS03465 0.67 -1.1
723,752 - A4249_RS03465 0.67 +0.0
723,752 - A4249_RS03465 0.67 -0.4
723,752 - A4249_RS03465 0.67 +0.8
723,805 + A4249_RS03465 0.80 +0.5
723,805 + A4249_RS03465 0.80 +0.0
723,805 + A4249_RS03465 0.80 +0.8
723,805 + A4249_RS03465 0.80 -0.0
723,868 + -0.4
723,868 + +0.1
723,868 + +0.1
723,869 - +1.5
723,875 - -2.2
723,875 - -0.1
724,007 + -0.0
724,007 + +0.1
724,007 + +0.2
724,008 - -0.3
724,008 - +0.4
724,113 + A4249_RS03470 0.45 -0.4
724,113 + A4249_RS03470 0.45 -0.2
724,113 + A4249_RS03470 0.45 -1.5
724,113 + A4249_RS03470 0.45 -0.3
724,113 + A4249_RS03470 0.45 -2.4
724,113 + A4249_RS03470 0.45 +0.7
724,113 + A4249_RS03470 0.45 -0.4
724,113 + A4249_RS03470 0.45 -0.7
724,113 + A4249_RS03470 0.45 -0.3
724,114 - A4249_RS03470 0.46 +0.3
724,114 - A4249_RS03470 0.46 -0.2
724,114 - A4249_RS03470 0.46 -0.4
724,114 - A4249_RS03470 0.46 +0.5
724,114 - A4249_RS03470 0.46 -0.7
724,114 - A4249_RS03470 0.46 +0.2
724,114 - A4249_RS03470 0.46 +0.2
724,114 - A4249_RS03470 0.46 +0.4
724,114 - A4249_RS03470 0.46 -0.5
724,114 - A4249_RS03470 0.46 +0.0
724,259 + -0.3
724,259 + -1.2
724,259 + +0.4
724,259 + +0.3
724,260 - +0.0
724,260 - -0.1
724,260 - +0.8
724,260 - -1.0
724,355 + A4249_RS03475 0.13 -0.1
724,356 - A4249_RS03475 0.13 -0.5
724,442 + A4249_RS03475 0.20 +0.1
724,442 + A4249_RS03475 0.20 -0.7
724,443 - A4249_RS03475 0.21 +0.6
724,443 - A4249_RS03475 0.21 -0.9
724,443 - A4249_RS03475 0.21 +0.5
724,443 - A4249_RS03475 0.21 +0.1
724,464 + A4249_RS03475 0.22 +0.1
724,464 + A4249_RS03475 0.22 -0.2
724,464 + A4249_RS03475 0.22 -0.2
724,465 - A4249_RS03475 0.22 +0.1
724,465 - A4249_RS03475 0.22 -0.0
724,465 - A4249_RS03475 0.22 -0.5
724,465 - A4249_RS03475 0.22 -0.1
724,465 - A4249_RS03475 0.22 +0.7
724,465 - A4249_RS03475 0.22 -0.1
724,554 + A4249_RS03475 0.30 -0.4
724,554 + A4249_RS03475 0.30 +1.3
724,554 + A4249_RS03475 0.30 -1.4
724,555 - A4249_RS03475 0.30 +0.3
724,664 + A4249_RS03475 0.39 -0.1
724,664 + A4249_RS03475 0.39 -0.3
724,664 + A4249_RS03475 0.39 +1.1
724,664 + A4249_RS03475 0.39 +0.7
724,665 - A4249_RS03475 0.39 +0.8
724,665 - A4249_RS03475 0.39 -0.3
724,665 - A4249_RS03475 0.39 -0.6
724,665 - A4249_RS03475 0.39 +0.0
724,665 - A4249_RS03475 0.39 +0.8
724,665 - A4249_RS03475 0.39 -0.5
724,665 - A4249_RS03475 0.39 +0.6
724,665 - A4249_RS03475 0.39 +0.3
724,665 - A4249_RS03475 0.39 -0.4
724,861 + A4249_RS03475 0.56 +0.5
724,861 + A4249_RS03475 0.56 +0.3
724,861 + A4249_RS03475 0.56 -0.4
724,862 - A4249_RS03475 0.56 -0.4

Or see this region's nucleotide sequence