Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS00445

Experiment: Uracil 0.8921 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS00435 and A4249_RS00440 are separated by 26 nucleotidesA4249_RS00440 and A4249_RS00445 are separated by 107 nucleotidesA4249_RS00445 and A4249_RS00450 are separated by 94 nucleotides A4249_RS00435: A4249_RS00435 - S-formylglutathione hydrolase, at 73,483 to 74,322 _RS00435 A4249_RS00440: A4249_RS00440 - hypothetical protein, at 74,349 to 74,573 _RS00440 A4249_RS00445: A4249_RS00445 - superoxide dismutase, at 74,681 to 75,292 _RS00445 A4249_RS00450: A4249_RS00450 - MBL fold metallo-hydrolase, at 75,387 to 76,325 _RS00450 Position (kb) 74 75 76Strain fitness (log2 ratio) -2 -1 0 1at 73.762 kb on + strand, within A4249_RS00435at 73.789 kb on + strand, within A4249_RS00435at 73.789 kb on + strand, within A4249_RS00435at 73.789 kb on + strand, within A4249_RS00435at 73.789 kb on + strand, within A4249_RS00435at 73.789 kb on + strand, within A4249_RS00435at 73.789 kb on + strand, within A4249_RS00435at 73.789 kb on + strand, within A4249_RS00435at 73.789 kb on + strand, within A4249_RS00435at 73.789 kb on + strand, within A4249_RS00435at 73.789 kb on + strand, within A4249_RS00435at 73.789 kb on + strand, within A4249_RS00435at 73.789 kb on + strand, within A4249_RS00435at 73.789 kb on + strand, within A4249_RS00435at 73.789 kb on + strand, within A4249_RS00435at 73.789 kb on + strand, within A4249_RS00435at 73.790 kb on - strand, within A4249_RS00435at 73.790 kb on - strand, within A4249_RS00435at 73.790 kb on - strand, within A4249_RS00435at 73.790 kb on - strand, within A4249_RS00435at 73.790 kb on - strand, within A4249_RS00435at 73.790 kb on - strand, within A4249_RS00435at 73.790 kb on - strand, within A4249_RS00435at 73.790 kb on - strand, within A4249_RS00435at 73.790 kb on - strand, within A4249_RS00435at 73.790 kb on - strand, within A4249_RS00435at 73.790 kb on - strand, within A4249_RS00435at 73.840 kb on + strand, within A4249_RS00435at 73.840 kb on + strand, within A4249_RS00435at 73.840 kb on + strand, within A4249_RS00435at 73.840 kb on + strand, within A4249_RS00435at 73.840 kb on + strand, within A4249_RS00435at 73.841 kb on - strand, within A4249_RS00435at 73.841 kb on - strand, within A4249_RS00435at 73.841 kb on - strand, within A4249_RS00435at 73.841 kb on - strand, within A4249_RS00435at 73.841 kb on - strand, within A4249_RS00435at 73.841 kb on - strand, within A4249_RS00435at 73.841 kb on - strand, within A4249_RS00435at 73.841 kb on - strand, within A4249_RS00435at 73.841 kb on - strand, within A4249_RS00435at 73.841 kb on - strand, within A4249_RS00435at 73.841 kb on - strand, within A4249_RS00435at 73.841 kb on - strand, within A4249_RS00435at 74.041 kb on + strand, within A4249_RS00435at 74.042 kb on - strand, within A4249_RS00435at 74.042 kb on - strand, within A4249_RS00435at 74.042 kb on - strand, within A4249_RS00435at 74.042 kb on - strand, within A4249_RS00435at 74.119 kb on + strand, within A4249_RS00435at 74.119 kb on + strand, within A4249_RS00435at 74.119 kb on + strand, within A4249_RS00435at 74.119 kb on + strand, within A4249_RS00435at 74.120 kb on - strand, within A4249_RS00435at 74.120 kb on - strand, within A4249_RS00435at 74.120 kb on - strand, within A4249_RS00435at 74.232 kb on + strand, within A4249_RS00435at 74.232 kb on + strand, within A4249_RS00435at 74.233 kb on - strand, within A4249_RS00435at 74.233 kb on - strand, within A4249_RS00435at 74.234 kb on + strand, within A4249_RS00435at 74.234 kb on + strand, within A4249_RS00435at 74.234 kb on + strand, within A4249_RS00435at 74.235 kb on - strand, within A4249_RS00435at 74.235 kb on - strand, within A4249_RS00435at 74.257 kb on + strandat 74.257 kb on + strandat 74.257 kb on + strandat 74.257 kb on + strandat 74.257 kb on + strandat 74.257 kb on + strandat 74.257 kb on + strandat 74.257 kb on + strandat 74.258 kb on - strandat 74.258 kb on - strandat 74.258 kb on - strandat 74.337 kb on + strandat 74.337 kb on + strandat 74.337 kb on + strandat 74.337 kb on + strandat 74.337 kb on + strandat 74.337 kb on + strandat 74.337 kb on + strandat 74.338 kb on - strandat 74.338 kb on - strandat 74.338 kb on - strandat 74.406 kb on + strand, within A4249_RS00440at 74.407 kb on - strand, within A4249_RS00440at 74.588 kb on + strandat 74.588 kb on + strandat 74.588 kb on + strandat 74.589 kb on - strandat 74.589 kb on - strandat 74.639 kb on + strandat 74.639 kb on + strandat 74.639 kb on + strandat 74.639 kb on + strandat 74.639 kb on + strandat 75.290 kb on + strandat 75.290 kb on + strandat 75.290 kb on + strandat 75.290 kb on + strandat 75.290 kb on + strandat 75.290 kb on + strandat 75.291 kb on - strandat 75.300 kb on - strandat 75.440 kb on + strandat 75.492 kb on - strand, within A4249_RS00450at 75.528 kb on + strand, within A4249_RS00450at 75.528 kb on + strand, within A4249_RS00450at 75.529 kb on - strand, within A4249_RS00450at 75.529 kb on - strand, within A4249_RS00450at 75.881 kb on + strand, within A4249_RS00450at 75.881 kb on + strand, within A4249_RS00450at 75.882 kb on - strand, within A4249_RS00450at 76.038 kb on - strand, within A4249_RS00450at 76.057 kb on - strand, within A4249_RS00450at 76.089 kb on + strand, within A4249_RS00450at 76.089 kb on + strand, within A4249_RS00450at 76.090 kb on - strand, within A4249_RS00450at 76.090 kb on - strand, within A4249_RS00450at 76.090 kb on - strand, within A4249_RS00450at 76.152 kb on + strand, within A4249_RS00450at 76.153 kb on - strand, within A4249_RS00450at 76.230 kb on + strand, within A4249_RS00450at 76.230 kb on + strand, within A4249_RS00450at 76.230 kb on + strand, within A4249_RS00450at 76.230 kb on + strand, within A4249_RS00450at 76.230 kb on + strand, within A4249_RS00450at 76.230 kb on + strand, within A4249_RS00450at 76.230 kb on + strand, within A4249_RS00450at 76.230 kb on + strand, within A4249_RS00450at 76.230 kb on + strand, within A4249_RS00450at 76.230 kb on + strand, within A4249_RS00450at 76.230 kb on + strand, within A4249_RS00450at 76.231 kb on - strand, within A4249_RS00450at 76.231 kb on - strand, within A4249_RS00450at 76.231 kb on - strand, within A4249_RS00450at 76.231 kb on - strand, within A4249_RS00450at 76.231 kb on - strand, within A4249_RS00450at 76.231 kb on - strand, within A4249_RS00450at 76.231 kb on - strand, within A4249_RS00450at 76.231 kb on - strand, within A4249_RS00450at 76.231 kb on - strand, within A4249_RS00450at 76.231 kb on - strand, within A4249_RS00450at 76.231 kb on - strand, within A4249_RS00450at 76.231 kb on - strand, within A4249_RS00450at 76.231 kb on - strand, within A4249_RS00450at 76.231 kb on - strand, within A4249_RS00450at 76.231 kb on - strand, within A4249_RS00450at 76.231 kb on - strand, within A4249_RS00450at 76.231 kb on - strand, within A4249_RS00450at 76.231 kb on - strand, within A4249_RS00450at 76.231 kb on - strand, within A4249_RS00450at 76.231 kb on - strand, within A4249_RS00450at 76.231 kb on - strand, within A4249_RS00450at 76.231 kb on - strand, within A4249_RS00450at 76.236 kb on + strandat 76.236 kb on + strandat 76.237 kb on - strandat 76.237 kb on - strandat 76.237 kb on - strandat 76.237 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Uracil 0.8921 mM (C)
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73,762 + A4249_RS00435 0.33 +0.7
73,789 + A4249_RS00435 0.36 -0.1
73,789 + A4249_RS00435 0.36 +0.2
73,789 + A4249_RS00435 0.36 -1.4
73,789 + A4249_RS00435 0.36 +0.4
73,789 + A4249_RS00435 0.36 -0.2
73,789 + A4249_RS00435 0.36 -1.0
73,789 + A4249_RS00435 0.36 -0.2
73,789 + A4249_RS00435 0.36 -0.0
73,789 + A4249_RS00435 0.36 -0.1
73,789 + A4249_RS00435 0.36 +1.0
73,789 + A4249_RS00435 0.36 +0.7
73,789 + A4249_RS00435 0.36 +0.1
73,789 + A4249_RS00435 0.36 +0.5
73,789 + A4249_RS00435 0.36 +0.2
73,789 + A4249_RS00435 0.36 -0.1
73,790 - A4249_RS00435 0.37 -0.3
73,790 - A4249_RS00435 0.37 -0.7
73,790 - A4249_RS00435 0.37 +0.2
73,790 - A4249_RS00435 0.37 -0.8
73,790 - A4249_RS00435 0.37 -0.1
73,790 - A4249_RS00435 0.37 -0.5
73,790 - A4249_RS00435 0.37 -2.3
73,790 - A4249_RS00435 0.37 -0.8
73,790 - A4249_RS00435 0.37 -1.4
73,790 - A4249_RS00435 0.37 +1.6
73,790 - A4249_RS00435 0.37 +1.0
73,840 + A4249_RS00435 0.42 -0.7
73,840 + A4249_RS00435 0.42 -1.1
73,840 + A4249_RS00435 0.42 +0.8
73,840 + A4249_RS00435 0.42 +0.6
73,840 + A4249_RS00435 0.42 +0.0
73,841 - A4249_RS00435 0.43 -0.3
73,841 - A4249_RS00435 0.43 -0.3
73,841 - A4249_RS00435 0.43 +0.4
73,841 - A4249_RS00435 0.43 -0.0
73,841 - A4249_RS00435 0.43 +0.1
73,841 - A4249_RS00435 0.43 +0.4
73,841 - A4249_RS00435 0.43 +0.1
73,841 - A4249_RS00435 0.43 +0.2
73,841 - A4249_RS00435 0.43 -0.2
73,841 - A4249_RS00435 0.43 -0.5
73,841 - A4249_RS00435 0.43 -0.4
73,841 - A4249_RS00435 0.43 +0.1
74,041 + A4249_RS00435 0.66 -1.5
74,042 - A4249_RS00435 0.67 +0.5
74,042 - A4249_RS00435 0.67 -0.1
74,042 - A4249_RS00435 0.67 +0.3
74,042 - A4249_RS00435 0.67 +0.8
74,119 + A4249_RS00435 0.76 +0.1
74,119 + A4249_RS00435 0.76 -0.3
74,119 + A4249_RS00435 0.76 +1.1
74,119 + A4249_RS00435 0.76 -0.3
74,120 - A4249_RS00435 0.76 -1.4
74,120 - A4249_RS00435 0.76 +0.6
74,120 - A4249_RS00435 0.76 -0.8
74,232 + A4249_RS00435 0.89 -0.5
74,232 + A4249_RS00435 0.89 +0.8
74,233 - A4249_RS00435 0.89 +0.8
74,233 - A4249_RS00435 0.89 -0.2
74,234 + A4249_RS00435 0.89 -0.2
74,234 + A4249_RS00435 0.89 +0.1
74,234 + A4249_RS00435 0.89 +0.4
74,235 - A4249_RS00435 0.90 -0.1
74,235 - A4249_RS00435 0.90 -0.2
74,257 + -0.5
74,257 + +0.4
74,257 + +1.6
74,257 + -0.1
74,257 + +0.7
74,257 + +0.3
74,257 + -0.0
74,257 + -0.2
74,258 - +0.8
74,258 - +0.6
74,258 - +0.1
74,337 + +0.7
74,337 + -0.3
74,337 + +1.0
74,337 + +1.3
74,337 + +0.0
74,337 + -1.1
74,337 + -0.4
74,338 - +0.3
74,338 - -0.3
74,338 - +0.6
74,406 + A4249_RS00440 0.25 +0.6
74,407 - A4249_RS00440 0.26 -0.4
74,588 + +1.1
74,588 + -1.0
74,588 + -0.0
74,589 - +0.6
74,589 - +0.4
74,639 + +0.2
74,639 + -0.0
74,639 + +0.3
74,639 + +1.3
74,639 + -0.4
75,290 + -0.7
75,290 + +0.3
75,290 + +0.0
75,290 + -0.1
75,290 + +0.2
75,290 + -0.4
75,291 - -1.0
75,300 - -1.9
75,440 + -0.4
75,492 - A4249_RS00450 0.11 +0.2
75,528 + A4249_RS00450 0.15 -0.2
75,528 + A4249_RS00450 0.15 +0.1
75,529 - A4249_RS00450 0.15 -0.2
75,529 - A4249_RS00450 0.15 +0.2
75,881 + A4249_RS00450 0.53 +0.2
75,881 + A4249_RS00450 0.53 -1.0
75,882 - A4249_RS00450 0.53 -2.0
76,038 - A4249_RS00450 0.69 -0.5
76,057 - A4249_RS00450 0.71 -0.1
76,089 + A4249_RS00450 0.75 +0.2
76,089 + A4249_RS00450 0.75 +0.9
76,090 - A4249_RS00450 0.75 +0.8
76,090 - A4249_RS00450 0.75 +0.4
76,090 - A4249_RS00450 0.75 +0.1
76,152 + A4249_RS00450 0.81 -0.4
76,153 - A4249_RS00450 0.82 -0.3
76,230 + A4249_RS00450 0.90 -0.3
76,230 + A4249_RS00450 0.90 +0.6
76,230 + A4249_RS00450 0.90 -0.5
76,230 + A4249_RS00450 0.90 -0.5
76,230 + A4249_RS00450 0.90 +0.6
76,230 + A4249_RS00450 0.90 -0.2
76,230 + A4249_RS00450 0.90 -0.3
76,230 + A4249_RS00450 0.90 +0.0
76,230 + A4249_RS00450 0.90 -0.7
76,230 + A4249_RS00450 0.90 -0.4
76,230 + A4249_RS00450 0.90 -0.4
76,231 - A4249_RS00450 0.90 +0.1
76,231 - A4249_RS00450 0.90 -0.1
76,231 - A4249_RS00450 0.90 -1.4
76,231 - A4249_RS00450 0.90 -0.3
76,231 - A4249_RS00450 0.90 -0.6
76,231 - A4249_RS00450 0.90 +0.1
76,231 - A4249_RS00450 0.90 -0.9
76,231 - A4249_RS00450 0.90 -1.0
76,231 - A4249_RS00450 0.90 -0.1
76,231 - A4249_RS00450 0.90 -0.5
76,231 - A4249_RS00450 0.90 +0.2
76,231 - A4249_RS00450 0.90 +1.0
76,231 - A4249_RS00450 0.90 +0.1
76,231 - A4249_RS00450 0.90 -0.7
76,231 - A4249_RS00450 0.90 +0.0
76,231 - A4249_RS00450 0.90 -0.6
76,231 - A4249_RS00450 0.90 -0.1
76,231 - A4249_RS00450 0.90 -0.1
76,231 - A4249_RS00450 0.90 -0.7
76,231 - A4249_RS00450 0.90 +1.2
76,231 - A4249_RS00450 0.90 -0.0
76,231 - A4249_RS00450 0.90 -0.6
76,236 + +0.4
76,236 + +0.1
76,237 - +0.1
76,237 - -0.1
76,237 - +1.6
76,237 - +0.4

Or see this region's nucleotide sequence