Experiment: Control_ECRC101_WM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt malZ and proY are separated by 155 nucleotides proY and brnQ are separated by 75 nucleotides
MCAODC_27750: malZ - maltodextrin glucosidase, at 2,294,170 to 2,295,987
malZ
MCAODC_27755: proY - proline-specific permease ProY, at 2,296,143 to 2,297,516
proY
MCAODC_27760: brnQ - branched-chain amino acid transporter carrier protein BrnQ, at 2,297,592 to 2,298,911
brnQ
Position (kb)
2296
2297
2298 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 2295.290 kb on - strand, within malZ at 2295.338 kb on + strand, within malZ at 2295.353 kb on + strand, within malZ at 2295.357 kb on + strand, within malZ at 2295.357 kb on + strand, within malZ at 2295.357 kb on + strand, within malZ at 2295.358 kb on - strand, within malZ at 2295.361 kb on + strand, within malZ at 2295.361 kb on + strand, within malZ at 2295.361 kb on + strand, within malZ at 2295.362 kb on - strand, within malZ at 2295.362 kb on - strand, within malZ at 2295.461 kb on + strand, within malZ at 2295.462 kb on - strand, within malZ at 2295.542 kb on + strand, within malZ at 2295.542 kb on + strand, within malZ at 2295.542 kb on + strand, within malZ at 2295.542 kb on + strand, within malZ at 2295.542 kb on + strand, within malZ at 2295.545 kb on + strand, within malZ at 2295.545 kb on + strand, within malZ at 2295.545 kb on + strand, within malZ at 2295.545 kb on + strand, within malZ at 2295.546 kb on - strand, within malZ at 2295.546 kb on - strand, within malZ at 2295.546 kb on - strand, within malZ at 2295.546 kb on - strand, within malZ at 2295.579 kb on + strand, within malZ at 2295.579 kb on + strand, within malZ at 2295.579 kb on + strand, within malZ at 2295.708 kb on + strand, within malZ at 2295.709 kb on - strand, within malZ at 2295.749 kb on + strand, within malZ at 2295.749 kb on + strand, within malZ at 2295.750 kb on - strand, within malZ at 2295.831 kb on + strand at 2295.831 kb on + strand at 2295.870 kb on + strand at 2295.879 kb on + strand at 2295.879 kb on + strand at 2295.880 kb on - strand at 2295.880 kb on - strand at 2295.918 kb on + strand at 2295.918 kb on + strand at 2295.918 kb on + strand at 2295.918 kb on + strand at 2295.919 kb on - strand at 2295.919 kb on - strand at 2295.919 kb on - strand at 2295.919 kb on - strand at 2295.979 kb on + strand at 2295.979 kb on + strand at 2295.980 kb on - strand at 2295.980 kb on - strand at 2295.987 kb on + strand at 2295.988 kb on - strand at 2295.988 kb on - strand at 2296.023 kb on + strand at 2296.023 kb on + strand at 2296.024 kb on - strand at 2296.028 kb on + strand at 2296.028 kb on + strand at 2296.029 kb on - strand at 2296.029 kb on - strand at 2296.141 kb on + strand at 2296.141 kb on + strand at 2296.142 kb on - strand at 2296.144 kb on + strand at 2296.182 kb on - strand at 2296.228 kb on + strand at 2296.228 kb on + strand at 2296.229 kb on - strand at 2296.238 kb on + strand at 2296.275 kb on - strand at 2296.275 kb on - strand at 2296.329 kb on - strand, within proY at 2296.344 kb on - strand, within proY at 2296.397 kb on + strand, within proY at 2296.398 kb on - strand, within proY at 2296.468 kb on + strand, within proY at 2296.468 kb on + strand, within proY at 2296.469 kb on - strand, within proY at 2296.477 kb on + strand, within proY at 2296.478 kb on - strand, within proY at 2296.500 kb on - strand, within proY at 2296.584 kb on - strand, within proY at 2296.611 kb on + strand, within proY at 2296.612 kb on - strand, within proY at 2296.612 kb on - strand, within proY at 2296.612 kb on - strand, within proY at 2296.622 kb on + strand, within proY at 2296.622 kb on + strand, within proY at 2296.622 kb on + strand, within proY at 2296.623 kb on - strand, within proY at 2296.658 kb on + strand, within proY at 2296.679 kb on + strand, within proY at 2296.679 kb on + strand, within proY at 2296.688 kb on + strand, within proY at 2296.744 kb on + strand, within proY at 2296.745 kb on - strand, within proY at 2296.748 kb on + strand, within proY at 2296.749 kb on - strand, within proY at 2296.754 kb on + strand, within proY at 2296.754 kb on + strand, within proY at 2296.754 kb on + strand, within proY at 2296.755 kb on - strand, within proY at 2296.755 kb on - strand, within proY at 2296.755 kb on - strand, within proY at 2296.755 kb on - strand, within proY at 2296.755 kb on - strand, within proY at 2296.755 kb on - strand, within proY at 2296.755 kb on - strand, within proY at 2296.755 kb on - strand, within proY at 2296.755 kb on - strand, within proY at 2296.777 kb on + strand, within proY at 2296.777 kb on + strand, within proY at 2296.777 kb on + strand, within proY at 2296.778 kb on - strand, within proY at 2296.809 kb on - strand, within proY at 2296.857 kb on - strand, within proY at 2296.912 kb on - strand, within proY at 2296.912 kb on - strand, within proY at 2296.912 kb on - strand, within proY at 2296.961 kb on + strand, within proY at 2297.175 kb on + strand, within proY at 2297.177 kb on + strand, within proY at 2297.177 kb on + strand, within proY at 2297.178 kb on - strand, within proY at 2297.178 kb on - strand, within proY at 2297.178 kb on - strand, within proY at 2297.179 kb on + strand, within proY at 2297.179 kb on + strand, within proY at 2297.179 kb on + strand, within proY at 2297.179 kb on + strand, within proY at 2297.179 kb on + strand, within proY at 2297.179 kb on + strand, within proY at 2297.179 kb on + strand, within proY at 2297.179 kb on + strand, within proY at 2297.179 kb on + strand, within proY at 2297.179 kb on + strand, within proY at 2297.179 kb on + strand, within proY at 2297.179 kb on + strand, within proY at 2297.179 kb on + strand, within proY at 2297.180 kb on + strand, within proY at 2297.180 kb on - strand, within proY at 2297.180 kb on - strand, within proY at 2297.180 kb on - strand, within proY at 2297.180 kb on - strand, within proY at 2297.180 kb on - strand, within proY at 2297.180 kb on - strand, within proY at 2297.180 kb on - strand, within proY at 2297.180 kb on - strand, within proY at 2297.180 kb on - strand, within proY at 2297.180 kb on - strand, within proY at 2297.180 kb on - strand, within proY at 2297.180 kb on - strand, within proY at 2297.180 kb on - strand, within proY at 2297.183 kb on + strand, within proY at 2297.216 kb on + strand, within proY at 2297.216 kb on + strand, within proY at 2297.234 kb on - strand, within proY at 2297.251 kb on + strand, within proY at 2297.251 kb on + strand, within proY at 2297.252 kb on - strand, within proY at 2297.312 kb on + strand, within proY at 2297.313 kb on - strand, within proY at 2297.348 kb on + strand, within proY at 2297.349 kb on - strand, within proY at 2297.349 kb on - strand, within proY at 2297.349 kb on - strand, within proY at 2297.349 kb on - strand, within proY at 2297.350 kb on + strand, within proY at 2297.350 kb on + strand, within proY at 2297.350 kb on + strand, within proY at 2297.351 kb on - strand, within proY at 2297.351 kb on - strand, within proY at 2297.372 kb on + strand, within proY at 2297.372 kb on + strand, within proY at 2297.373 kb on - strand, within proY at 2297.373 kb on - strand, within proY at 2297.373 kb on - strand, within proY at 2297.375 kb on - strand, within proY at 2297.426 kb on - strand at 2297.462 kb on + strand at 2297.463 kb on - strand at 2297.470 kb on - strand at 2297.470 kb on - strand at 2297.470 kb on - strand at 2297.480 kb on + strand at 2297.484 kb on + strand at 2297.497 kb on - strand at 2297.541 kb on - strand at 2297.593 kb on + strand at 2297.594 kb on - strand at 2297.594 kb on - strand at 2297.639 kb on + strand at 2297.639 kb on + strand at 2297.783 kb on + strand, within brnQ at 2297.783 kb on + strand, within brnQ at 2297.817 kb on - strand, within brnQ at 2297.842 kb on - strand, within brnQ at 2297.842 kb on - strand, within brnQ at 2297.844 kb on + strand, within brnQ at 2297.844 kb on + strand, within brnQ at 2297.845 kb on - strand, within brnQ at 2297.858 kb on + strand, within brnQ at 2297.924 kb on + strand, within brnQ at 2297.966 kb on + strand, within brnQ at 2297.967 kb on - strand, within brnQ at 2297.972 kb on - strand, within brnQ at 2297.972 kb on - strand, within brnQ at 2297.982 kb on + strand, within brnQ at 2297.986 kb on + strand, within brnQ at 2297.987 kb on - strand, within brnQ at 2298.103 kb on + strand, within brnQ at 2298.103 kb on + strand, within brnQ at 2298.104 kb on - strand, within brnQ at 2298.104 kb on - strand, within brnQ at 2298.116 kb on + strand, within brnQ at 2298.116 kb on + strand, within brnQ at 2298.116 kb on + strand, within brnQ at 2298.117 kb on - strand, within brnQ at 2298.185 kb on - strand, within brnQ at 2298.185 kb on - strand, within brnQ at 2298.231 kb on - strand, within brnQ at 2298.233 kb on - strand, within brnQ at 2298.287 kb on + strand, within brnQ at 2298.287 kb on + strand, within brnQ at 2298.331 kb on + strand, within brnQ at 2298.332 kb on - strand, within brnQ
Per-strain Table
Position Strand Gene LocusTag Fraction Control_ECRC101_WM remove 2,295,290 - malZ MCAODC_27750 0.62 -0.5 2,295,338 + malZ MCAODC_27750 0.64 -0.2 2,295,353 + malZ MCAODC_27750 0.65 +0.6 2,295,357 + malZ MCAODC_27750 0.65 +0.8 2,295,357 + malZ MCAODC_27750 0.65 +0.2 2,295,357 + malZ MCAODC_27750 0.65 -1.2 2,295,358 - malZ MCAODC_27750 0.65 -0.1 2,295,361 + malZ MCAODC_27750 0.66 -1.0 2,295,361 + malZ MCAODC_27750 0.66 -0.6 2,295,361 + malZ MCAODC_27750 0.66 +1.4 2,295,362 - malZ MCAODC_27750 0.66 +0.1 2,295,362 - malZ MCAODC_27750 0.66 -0.5 2,295,461 + malZ MCAODC_27750 0.71 +0.7 2,295,462 - malZ MCAODC_27750 0.71 +0.2 2,295,542 + malZ MCAODC_27750 0.75 -0.5 2,295,542 + malZ MCAODC_27750 0.75 -0.0 2,295,542 + malZ MCAODC_27750 0.75 -0.0 2,295,542 + malZ MCAODC_27750 0.75 -0.7 2,295,542 + malZ MCAODC_27750 0.75 -1.2 2,295,545 + malZ MCAODC_27750 0.76 +1.2 2,295,545 + malZ MCAODC_27750 0.76 -2.6 2,295,545 + malZ MCAODC_27750 0.76 +0.2 2,295,545 + malZ MCAODC_27750 0.76 +1.3 2,295,546 - malZ MCAODC_27750 0.76 -0.4 2,295,546 - malZ MCAODC_27750 0.76 -0.6 2,295,546 - malZ MCAODC_27750 0.76 +0.8 2,295,546 - malZ MCAODC_27750 0.76 -3.8 2,295,579 + malZ MCAODC_27750 0.78 +0.5 2,295,579 + malZ MCAODC_27750 0.78 +0.4 2,295,579 + malZ MCAODC_27750 0.78 +0.6 2,295,708 + malZ MCAODC_27750 0.85 +2.0 2,295,709 - malZ MCAODC_27750 0.85 -2.9 2,295,749 + malZ MCAODC_27750 0.87 +0.4 2,295,749 + malZ MCAODC_27750 0.87 +0.2 2,295,750 - malZ MCAODC_27750 0.87 -2.3 2,295,831 + -0.1 2,295,831 + -1.4 2,295,870 + -2.0 2,295,879 + +1.0 2,295,879 + +1.7 2,295,880 - -2.4 2,295,880 - +1.6 2,295,918 + -1.2 2,295,918 + -1.0 2,295,918 + +0.3 2,295,918 + -0.3 2,295,919 - +0.7 2,295,919 - -0.4 2,295,919 - -2.1 2,295,919 - -3.4 2,295,979 + +0.7 2,295,979 + -0.2 2,295,980 - +0.3 2,295,980 - +0.4 2,295,987 + +0.2 2,295,988 - +2.0 2,295,988 - -0.0 2,296,023 + +1.7 2,296,023 + -0.2 2,296,024 - -0.4 2,296,028 + +0.2 2,296,028 + +0.1 2,296,029 - +0.3 2,296,029 - -0.1 2,296,141 + +1.2 2,296,141 + +2.0 2,296,142 - -0.1 2,296,144 + +1.5 2,296,182 - +0.1 2,296,228 + -0.5 2,296,228 + +0.5 2,296,229 - -0.6 2,296,238 + -1.4 2,296,275 - +1.0 2,296,275 - +0.6 2,296,329 - proY MCAODC_27755 0.14 -0.9 2,296,344 - proY MCAODC_27755 0.15 -0.3 2,296,397 + proY MCAODC_27755 0.18 -0.1 2,296,398 - proY MCAODC_27755 0.19 +0.6 2,296,468 + proY MCAODC_27755 0.24 +0.2 2,296,468 + proY MCAODC_27755 0.24 +0.9 2,296,469 - proY MCAODC_27755 0.24 +0.7 2,296,477 + proY MCAODC_27755 0.24 -2.1 2,296,478 - proY MCAODC_27755 0.24 -3.6 2,296,500 - proY MCAODC_27755 0.26 -0.3 2,296,584 - proY MCAODC_27755 0.32 +0.2 2,296,611 + proY MCAODC_27755 0.34 -0.6 2,296,612 - proY MCAODC_27755 0.34 -1.5 2,296,612 - proY MCAODC_27755 0.34 -1.2 2,296,612 - proY MCAODC_27755 0.34 -0.6 2,296,622 + proY MCAODC_27755 0.35 -0.0 2,296,622 + proY MCAODC_27755 0.35 -3.0 2,296,622 + proY MCAODC_27755 0.35 +2.7 2,296,623 - proY MCAODC_27755 0.35 +0.3 2,296,658 + proY MCAODC_27755 0.37 -1.3 2,296,679 + proY MCAODC_27755 0.39 -0.6 2,296,679 + proY MCAODC_27755 0.39 -0.2 2,296,688 + proY MCAODC_27755 0.40 -1.3 2,296,744 + proY MCAODC_27755 0.44 +0.6 2,296,745 - proY MCAODC_27755 0.44 +0.5 2,296,748 + proY MCAODC_27755 0.44 -0.2 2,296,749 - proY MCAODC_27755 0.44 +0.7 2,296,754 + proY MCAODC_27755 0.44 +0.6 2,296,754 + proY MCAODC_27755 0.44 -0.9 2,296,754 + proY MCAODC_27755 0.44 -0.5 2,296,755 - proY MCAODC_27755 0.45 +1.1 2,296,755 - proY MCAODC_27755 0.45 -1.5 2,296,755 - proY MCAODC_27755 0.45 +1.3 2,296,755 - proY MCAODC_27755 0.45 +0.6 2,296,755 - proY MCAODC_27755 0.45 -0.8 2,296,755 - proY MCAODC_27755 0.45 +1.1 2,296,755 - proY MCAODC_27755 0.45 +0.1 2,296,755 - proY MCAODC_27755 0.45 +1.6 2,296,755 - proY MCAODC_27755 0.45 +0.3 2,296,777 + proY MCAODC_27755 0.46 -0.1 2,296,777 + proY MCAODC_27755 0.46 -0.6 2,296,777 + proY MCAODC_27755 0.46 -0.1 2,296,778 - proY MCAODC_27755 0.46 +1.1 2,296,809 - proY MCAODC_27755 0.48 +0.3 2,296,857 - proY MCAODC_27755 0.52 -1.1 2,296,912 - proY MCAODC_27755 0.56 +2.0 2,296,912 - proY MCAODC_27755 0.56 +2.0 2,296,912 - proY MCAODC_27755 0.56 +0.3 2,296,961 + proY MCAODC_27755 0.60 +1.1 2,297,175 + proY MCAODC_27755 0.75 +0.6 2,297,177 + proY MCAODC_27755 0.75 -3.1 2,297,177 + proY MCAODC_27755 0.75 -1.4 2,297,178 - proY MCAODC_27755 0.75 +0.7 2,297,178 - proY MCAODC_27755 0.75 +0.4 2,297,178 - proY MCAODC_27755 0.75 -1.6 2,297,179 + proY MCAODC_27755 0.75 -0.8 2,297,179 + proY MCAODC_27755 0.75 -2.4 2,297,179 + proY MCAODC_27755 0.75 -0.3 2,297,179 + proY MCAODC_27755 0.75 +2.4 2,297,179 + proY MCAODC_27755 0.75 +0.5 2,297,179 + proY MCAODC_27755 0.75 -0.6 2,297,179 + proY MCAODC_27755 0.75 -0.6 2,297,179 + proY MCAODC_27755 0.75 -1.9 2,297,179 + proY MCAODC_27755 0.75 +1.2 2,297,179 + proY MCAODC_27755 0.75 -0.7 2,297,179 + proY MCAODC_27755 0.75 -0.4 2,297,179 + proY MCAODC_27755 0.75 -1.5 2,297,179 + proY MCAODC_27755 0.75 -0.7 2,297,180 + proY MCAODC_27755 0.75 -0.7 2,297,180 - proY MCAODC_27755 0.75 -0.1 2,297,180 - proY MCAODC_27755 0.75 +1.1 2,297,180 - proY MCAODC_27755 0.75 -0.0 2,297,180 - proY MCAODC_27755 0.75 +0.4 2,297,180 - proY MCAODC_27755 0.75 +0.2 2,297,180 - proY MCAODC_27755 0.75 -0.2 2,297,180 - proY MCAODC_27755 0.75 -2.3 2,297,180 - proY MCAODC_27755 0.75 +0.1 2,297,180 - proY MCAODC_27755 0.75 +0.1 2,297,180 - proY MCAODC_27755 0.75 -2.6 2,297,180 - proY MCAODC_27755 0.75 +0.7 2,297,180 - proY MCAODC_27755 0.75 +1.2 2,297,180 - proY MCAODC_27755 0.75 -0.4 2,297,183 + proY MCAODC_27755 0.76 +0.0 2,297,216 + proY MCAODC_27755 0.78 -0.5 2,297,216 + proY MCAODC_27755 0.78 +0.8 2,297,234 - proY MCAODC_27755 0.79 +0.5 2,297,251 + proY MCAODC_27755 0.81 -0.5 2,297,251 + proY MCAODC_27755 0.81 -0.0 2,297,252 - proY MCAODC_27755 0.81 +0.2 2,297,312 + proY MCAODC_27755 0.85 -2.3 2,297,313 - proY MCAODC_27755 0.85 -1.8 2,297,348 + proY MCAODC_27755 0.88 +0.9 2,297,349 - proY MCAODC_27755 0.88 -0.6 2,297,349 - proY MCAODC_27755 0.88 -0.6 2,297,349 - proY MCAODC_27755 0.88 -0.9 2,297,349 - proY MCAODC_27755 0.88 +0.7 2,297,350 + proY MCAODC_27755 0.88 -1.5 2,297,350 + proY MCAODC_27755 0.88 -0.6 2,297,350 + proY MCAODC_27755 0.88 +0.1 2,297,351 - proY MCAODC_27755 0.88 +0.6 2,297,351 - proY MCAODC_27755 0.88 -0.4 2,297,372 + proY MCAODC_27755 0.89 +0.8 2,297,372 + proY MCAODC_27755 0.89 -0.3 2,297,373 - proY MCAODC_27755 0.90 +0.3 2,297,373 - proY MCAODC_27755 0.90 +0.9 2,297,373 - proY MCAODC_27755 0.90 +0.1 2,297,375 - proY MCAODC_27755 0.90 +0.8 2,297,426 - +1.3 2,297,462 + +0.4 2,297,463 - -0.3 2,297,470 - +0.5 2,297,470 - +0.1 2,297,470 - +0.1 2,297,480 + -1.0 2,297,484 + -1.9 2,297,497 - +2.2 2,297,541 - -1.6 2,297,593 + +0.7 2,297,594 - +0.1 2,297,594 - -1.0 2,297,639 + -0.4 2,297,639 + -1.6 2,297,783 + brnQ MCAODC_27760 0.14 -0.7 2,297,783 + brnQ MCAODC_27760 0.14 +0.6 2,297,817 - brnQ MCAODC_27760 0.17 -2.2 2,297,842 - brnQ MCAODC_27760 0.19 +0.2 2,297,842 - brnQ MCAODC_27760 0.19 -0.3 2,297,844 + brnQ MCAODC_27760 0.19 -1.4 2,297,844 + brnQ MCAODC_27760 0.19 +1.8 2,297,845 - brnQ MCAODC_27760 0.19 -0.3 2,297,858 + brnQ MCAODC_27760 0.20 +0.2 2,297,924 + brnQ MCAODC_27760 0.25 -1.8 2,297,966 + brnQ MCAODC_27760 0.28 -0.1 2,297,967 - brnQ MCAODC_27760 0.28 -0.6 2,297,972 - brnQ MCAODC_27760 0.29 +0.0 2,297,972 - brnQ MCAODC_27760 0.29 -3.6 2,297,982 + brnQ MCAODC_27760 0.30 -1.8 2,297,986 + brnQ MCAODC_27760 0.30 +0.5 2,297,987 - brnQ MCAODC_27760 0.30 -1.3 2,298,103 + brnQ MCAODC_27760 0.39 -0.4 2,298,103 + brnQ MCAODC_27760 0.39 +0.7 2,298,104 - brnQ MCAODC_27760 0.39 -0.6 2,298,104 - brnQ MCAODC_27760 0.39 -1.4 2,298,116 + brnQ MCAODC_27760 0.40 +0.8 2,298,116 + brnQ MCAODC_27760 0.40 -0.5 2,298,116 + brnQ MCAODC_27760 0.40 -2.2 2,298,117 - brnQ MCAODC_27760 0.40 -2.8 2,298,185 - brnQ MCAODC_27760 0.45 -3.5 2,298,185 - brnQ MCAODC_27760 0.45 +1.0 2,298,231 - brnQ MCAODC_27760 0.48 +1.1 2,298,233 - brnQ MCAODC_27760 0.49 -1.7 2,298,287 + brnQ MCAODC_27760 0.53 -2.2 2,298,287 + brnQ MCAODC_27760 0.53 +0.7 2,298,331 + brnQ MCAODC_27760 0.56 -2.7 2,298,332 - brnQ MCAODC_27760 0.56 -0.0
Or see this region's nucleotide sequence