Strain Fitness in Escherichia coli ECRC101 around MCAODC_26525

Experiment: Control_ECRC101_WM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntdjlB and ybeR overlap by 4 nucleotidesybeR and ybeQ are separated by 164 nucleotidesybeQ and ybeQ are separated by 234 nucleotides MCAODC_26520: djlB - Uncharacterized J domain-containing protein DjlB, at 2,020,591 to 2,022,018 djlB MCAODC_26525: ybeR - Uncharacterized protein YbeR, at 2,022,015 to 2,022,722 ybeR MCAODC_26530: ybeQ - Sel1-repeat-containing protein YbeQ, at 2,022,887 to 2,023,042 ybeQ MCAODC_26535: ybeQ - Sel1-repeat-containing protein YbeQ, at 2,023,277 to 2,023,864 ybeQ Position (kb) 2022 2023Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 2021.026 kb on - strand, within djlBat 2021.048 kb on + strand, within djlBat 2021.048 kb on + strand, within djlBat 2021.049 kb on - strand, within djlBat 2021.049 kb on - strand, within djlBat 2021.049 kb on - strand, within djlBat 2021.049 kb on - strand, within djlBat 2021.049 kb on - strand, within djlBat 2021.049 kb on - strand, within djlBat 2021.049 kb on - strand, within djlBat 2021.049 kb on - strand, within djlBat 2021.107 kb on + strand, within djlBat 2021.107 kb on + strand, within djlBat 2021.107 kb on + strand, within djlBat 2021.118 kb on - strand, within djlBat 2021.153 kb on - strand, within djlBat 2021.247 kb on - strand, within djlBat 2021.252 kb on + strand, within djlBat 2021.255 kb on + strand, within djlBat 2021.255 kb on + strand, within djlBat 2021.341 kb on - strand, within djlBat 2021.342 kb on + strand, within djlBat 2021.343 kb on - strand, within djlBat 2021.411 kb on + strand, within djlBat 2021.411 kb on + strand, within djlBat 2021.412 kb on - strand, within djlBat 2021.546 kb on + strand, within djlBat 2021.623 kb on + strand, within djlBat 2021.624 kb on - strand, within djlBat 2021.645 kb on - strand, within djlBat 2021.714 kb on + strand, within djlBat 2021.715 kb on - strand, within djlBat 2021.766 kb on + strand, within djlBat 2021.779 kb on + strand, within djlBat 2021.780 kb on - strand, within djlBat 2021.822 kb on + strand, within djlBat 2021.823 kb on - strand, within djlBat 2021.902 kb on - strandat 2022.114 kb on + strand, within ybeRat 2022.121 kb on + strand, within ybeRat 2022.156 kb on - strand, within ybeRat 2022.174 kb on + strand, within ybeRat 2022.174 kb on + strand, within ybeRat 2022.188 kb on + strand, within ybeRat 2022.242 kb on - strand, within ybeRat 2022.257 kb on + strand, within ybeRat 2022.258 kb on - strand, within ybeRat 2022.260 kb on - strand, within ybeRat 2022.277 kb on - strand, within ybeRat 2022.284 kb on + strand, within ybeRat 2022.301 kb on - strand, within ybeRat 2022.327 kb on - strand, within ybeRat 2022.367 kb on + strand, within ybeRat 2022.381 kb on - strand, within ybeRat 2022.622 kb on - strand, within ybeRat 2022.804 kb on - strandat 2022.804 kb on - strandat 2022.924 kb on + strand, within ybeQat 2022.974 kb on - strand, within ybeQat 2023.038 kb on - strandat 2023.082 kb on + strandat 2023.082 kb on + strandat 2023.082 kb on + strandat 2023.124 kb on - strandat 2023.168 kb on - strandat 2023.177 kb on + strandat 2023.232 kb on + strandat 2023.233 kb on - strandat 2023.233 kb on - strandat 2023.233 kb on - strandat 2023.233 kb on - strandat 2023.342 kb on + strand, within ybeQat 2023.343 kb on - strand, within ybeQat 2023.343 kb on - strand, within ybeQat 2023.361 kb on + strand, within ybeQat 2023.377 kb on + strand, within ybeQat 2023.378 kb on - strand, within ybeQat 2023.387 kb on + strand, within ybeQat 2023.388 kb on - strand, within ybeQat 2023.469 kb on + strand, within ybeQat 2023.526 kb on + strand, within ybeQat 2023.528 kb on + strand, within ybeQat 2023.528 kb on + strand, within ybeQat 2023.529 kb on - strand, within ybeQat 2023.529 kb on - strand, within ybeQat 2023.556 kb on + strand, within ybeQat 2023.556 kb on + strand, within ybeQat 2023.557 kb on - strand, within ybeQat 2023.557 kb on - strand, within ybeQat 2023.559 kb on - strand, within ybeQat 2023.559 kb on - strand, within ybeQat 2023.559 kb on - strand, within ybeQat 2023.571 kb on + strand, within ybeQat 2023.571 kb on + strand, within ybeQat 2023.571 kb on + strand, within ybeQat 2023.571 kb on + strand, within ybeQat 2023.572 kb on - strand, within ybeQat 2023.572 kb on - strand, within ybeQat 2023.613 kb on + strand, within ybeQat 2023.614 kb on - strand, within ybeQat 2023.614 kb on - strand, within ybeQat 2023.614 kb on - strand, within ybeQat 2023.628 kb on + strand, within ybeQat 2023.628 kb on + strand, within ybeQat 2023.628 kb on + strand, within ybeQat 2023.630 kb on + strand, within ybeQat 2023.630 kb on + strand, within ybeQat 2023.630 kb on + strand, within ybeQat 2023.630 kb on + strand, within ybeQat 2023.630 kb on + strand, within ybeQat 2023.630 kb on + strand, within ybeQat 2023.630 kb on + strand, within ybeQat 2023.630 kb on + strand, within ybeQat 2023.631 kb on - strand, within ybeQat 2023.631 kb on - strand, within ybeQat 2023.631 kb on - strand, within ybeQat 2023.631 kb on - strand, within ybeQat 2023.631 kb on - strand, within ybeQat 2023.631 kb on - strand, within ybeQat 2023.631 kb on - strand, within ybeQat 2023.634 kb on + strand, within ybeQat 2023.634 kb on + strand, within ybeQat 2023.634 kb on + strand, within ybeQat 2023.634 kb on + strand, within ybeQat 2023.634 kb on + strand, within ybeQat 2023.634 kb on + strand, within ybeQat 2023.634 kb on + strand, within ybeQat 2023.634 kb on + strand, within ybeQat 2023.635 kb on - strand, within ybeQat 2023.636 kb on + strand, within ybeQat 2023.636 kb on + strand, within ybeQat 2023.636 kb on + strand, within ybeQat 2023.637 kb on - strand, within ybeQat 2023.637 kb on - strand, within ybeQat 2023.688 kb on - strand, within ybeQ

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Per-strain Table

Position Strand Gene LocusTag Fraction Control_ECRC101_WM
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2,021,026 - djlB MCAODC_26520 0.30 -0.4
2,021,048 + djlB MCAODC_26520 0.32 -0.5
2,021,048 + djlB MCAODC_26520 0.32 +0.8
2,021,049 - djlB MCAODC_26520 0.32 +0.3
2,021,049 - djlB MCAODC_26520 0.32 -0.3
2,021,049 - djlB MCAODC_26520 0.32 -1.3
2,021,049 - djlB MCAODC_26520 0.32 -0.7
2,021,049 - djlB MCAODC_26520 0.32 +0.3
2,021,049 - djlB MCAODC_26520 0.32 -0.5
2,021,049 - djlB MCAODC_26520 0.32 +1.2
2,021,049 - djlB MCAODC_26520 0.32 -0.3
2,021,107 + djlB MCAODC_26520 0.36 -2.2
2,021,107 + djlB MCAODC_26520 0.36 +1.0
2,021,107 + djlB MCAODC_26520 0.36 -0.3
2,021,118 - djlB MCAODC_26520 0.37 +1.4
2,021,153 - djlB MCAODC_26520 0.39 +0.4
2,021,247 - djlB MCAODC_26520 0.46 -0.7
2,021,252 + djlB MCAODC_26520 0.46 -1.2
2,021,255 + djlB MCAODC_26520 0.46 -2.8
2,021,255 + djlB MCAODC_26520 0.46 +0.6
2,021,341 - djlB MCAODC_26520 0.53 +1.9
2,021,342 + djlB MCAODC_26520 0.53 +0.9
2,021,343 - djlB MCAODC_26520 0.53 +1.7
2,021,411 + djlB MCAODC_26520 0.57 +3.1
2,021,411 + djlB MCAODC_26520 0.57 -1.0
2,021,412 - djlB MCAODC_26520 0.57 -0.9
2,021,546 + djlB MCAODC_26520 0.67 +1.5
2,021,623 + djlB MCAODC_26520 0.72 -2.1
2,021,624 - djlB MCAODC_26520 0.72 +0.6
2,021,645 - djlB MCAODC_26520 0.74 -0.1
2,021,714 + djlB MCAODC_26520 0.79 +1.4
2,021,715 - djlB MCAODC_26520 0.79 -0.3
2,021,766 + djlB MCAODC_26520 0.82 -0.2
2,021,779 + djlB MCAODC_26520 0.83 -0.6
2,021,780 - djlB MCAODC_26520 0.83 -2.5
2,021,822 + djlB MCAODC_26520 0.86 +3.2
2,021,823 - djlB MCAODC_26520 0.86 -0.3
2,021,902 - +1.0
2,022,114 + ybeR MCAODC_26525 0.14 -1.2
2,022,121 + ybeR MCAODC_26525 0.15 +0.0
2,022,156 - ybeR MCAODC_26525 0.20 -2.1
2,022,174 + ybeR MCAODC_26525 0.22 +0.5
2,022,174 + ybeR MCAODC_26525 0.22 -0.1
2,022,188 + ybeR MCAODC_26525 0.24 +3.7
2,022,242 - ybeR MCAODC_26525 0.32 -1.9
2,022,257 + ybeR MCAODC_26525 0.34 -1.1
2,022,258 - ybeR MCAODC_26525 0.34 -1.1
2,022,260 - ybeR MCAODC_26525 0.35 +0.6
2,022,277 - ybeR MCAODC_26525 0.37 -1.1
2,022,284 + ybeR MCAODC_26525 0.38 +0.3
2,022,301 - ybeR MCAODC_26525 0.40 +0.4
2,022,327 - ybeR MCAODC_26525 0.44 +1.3
2,022,367 + ybeR MCAODC_26525 0.50 +1.4
2,022,381 - ybeR MCAODC_26525 0.52 +0.2
2,022,622 - ybeR MCAODC_26525 0.86 +1.0
2,022,804 - -0.4
2,022,804 - +0.1
2,022,924 + ybeQ MCAODC_26530 0.24 +1.1
2,022,974 - ybeQ MCAODC_26530 0.56 -0.1
2,023,038 - +0.2
2,023,082 + +0.2
2,023,082 + +1.4
2,023,082 + -0.3
2,023,124 - +2.2
2,023,168 - +0.1
2,023,177 + +0.6
2,023,232 + +0.6
2,023,233 - -3.2
2,023,233 - +0.5
2,023,233 - +0.2
2,023,233 - -0.3
2,023,342 + ybeQ MCAODC_26535 0.11 -1.1
2,023,343 - ybeQ MCAODC_26535 0.11 +0.7
2,023,343 - ybeQ MCAODC_26535 0.11 -0.6
2,023,361 + ybeQ MCAODC_26535 0.14 -0.5
2,023,377 + ybeQ MCAODC_26535 0.17 +1.5
2,023,378 - ybeQ MCAODC_26535 0.17 -0.9
2,023,387 + ybeQ MCAODC_26535 0.19 -0.5
2,023,388 - ybeQ MCAODC_26535 0.19 +0.1
2,023,469 + ybeQ MCAODC_26535 0.33 -0.4
2,023,526 + ybeQ MCAODC_26535 0.42 +0.2
2,023,528 + ybeQ MCAODC_26535 0.43 +2.1
2,023,528 + ybeQ MCAODC_26535 0.43 +0.8
2,023,529 - ybeQ MCAODC_26535 0.43 -2.5
2,023,529 - ybeQ MCAODC_26535 0.43 -2.1
2,023,556 + ybeQ MCAODC_26535 0.47 -0.8
2,023,556 + ybeQ MCAODC_26535 0.47 +0.2
2,023,557 - ybeQ MCAODC_26535 0.48 -0.1
2,023,557 - ybeQ MCAODC_26535 0.48 -2.6
2,023,559 - ybeQ MCAODC_26535 0.48 +0.9
2,023,559 - ybeQ MCAODC_26535 0.48 -2.7
2,023,559 - ybeQ MCAODC_26535 0.48 +0.0
2,023,571 + ybeQ MCAODC_26535 0.50 -0.6
2,023,571 + ybeQ MCAODC_26535 0.50 -0.4
2,023,571 + ybeQ MCAODC_26535 0.50 -0.8
2,023,571 + ybeQ MCAODC_26535 0.50 +0.2
2,023,572 - ybeQ MCAODC_26535 0.50 +1.0
2,023,572 - ybeQ MCAODC_26535 0.50 -0.8
2,023,613 + ybeQ MCAODC_26535 0.57 -0.1
2,023,614 - ybeQ MCAODC_26535 0.57 -2.7
2,023,614 - ybeQ MCAODC_26535 0.57 +0.6
2,023,614 - ybeQ MCAODC_26535 0.57 -1.5
2,023,628 + ybeQ MCAODC_26535 0.60 -0.1
2,023,628 + ybeQ MCAODC_26535 0.60 -0.9
2,023,628 + ybeQ MCAODC_26535 0.60 -0.7
2,023,630 + ybeQ MCAODC_26535 0.60 -0.6
2,023,630 + ybeQ MCAODC_26535 0.60 +1.2
2,023,630 + ybeQ MCAODC_26535 0.60 +0.9
2,023,630 + ybeQ MCAODC_26535 0.60 +1.4
2,023,630 + ybeQ MCAODC_26535 0.60 +1.4
2,023,630 + ybeQ MCAODC_26535 0.60 -3.6
2,023,630 + ybeQ MCAODC_26535 0.60 +0.8
2,023,630 + ybeQ MCAODC_26535 0.60 -0.3
2,023,631 - ybeQ MCAODC_26535 0.60 -2.0
2,023,631 - ybeQ MCAODC_26535 0.60 +0.3
2,023,631 - ybeQ MCAODC_26535 0.60 +1.8
2,023,631 - ybeQ MCAODC_26535 0.60 -0.8
2,023,631 - ybeQ MCAODC_26535 0.60 +0.0
2,023,631 - ybeQ MCAODC_26535 0.60 -0.0
2,023,631 - ybeQ MCAODC_26535 0.60 -3.4
2,023,634 + ybeQ MCAODC_26535 0.61 -1.8
2,023,634 + ybeQ MCAODC_26535 0.61 +0.4
2,023,634 + ybeQ MCAODC_26535 0.61 +0.9
2,023,634 + ybeQ MCAODC_26535 0.61 +1.2
2,023,634 + ybeQ MCAODC_26535 0.61 -3.1
2,023,634 + ybeQ MCAODC_26535 0.61 -0.0
2,023,634 + ybeQ MCAODC_26535 0.61 +0.4
2,023,634 + ybeQ MCAODC_26535 0.61 -2.6
2,023,635 - ybeQ MCAODC_26535 0.61 +0.5
2,023,636 + ybeQ MCAODC_26535 0.61 -0.6
2,023,636 + ybeQ MCAODC_26535 0.61 +1.9
2,023,636 + ybeQ MCAODC_26535 0.61 +3.2
2,023,637 - ybeQ MCAODC_26535 0.61 -0.2
2,023,637 - ybeQ MCAODC_26535 0.61 +2.1
2,023,688 - ybeQ MCAODC_26535 0.70 -0.3

Or see this region's nucleotide sequence