Strain Fitness in Escherichia coli ECRC101 around MCAODC_03920

Experiment: Control_ECRC101_WM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntrpoC and rpoB_R687H are separated by 76 nucleotidesrpoB_R687H and rplL are separated by 319 nucleotidesrplL and rplJ are separated by 66 nucleotides MCAODC_03915: rpoC - DNA-directed RNA polymerase subunit beta', at 787,683 to 791,906 rpoC MCAODC_03920: rpoB_R687H - DNA-directed RNA polymerase subunit beta RpoB, at 791,983 to 796,011 _R687H MCAODC_03930: rplL - 50S ribosomal protein L7/L12, at 796,331 to 796,696 rplL MCAODC_03935: rplJ - 50S ribosomal protein L10, at 796,763 to 797,260 rplJ Position (kb) 791 792 793 794 795 796 797Strain fitness (log2 ratio) -2 -1 0 1at 791.928 kb on - strandat 796.180 kb on - strandat 796.183 kb on - strandat 796.222 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Control_ECRC101_WM
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791,928 - -2.5
796,180 - -0.7
796,183 - -0.5
796,222 - +0.3

Or see this region's nucleotide sequence