Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS18835

Experiment: beta-Cyclodextrin 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	beta-Cyclodextrin 2.5 mg/ml (C)
4,748,242	-		ABI39_RS18830	0.46	-1.1
4,748,315	-		ABI39_RS18830	0.51	-2.1
4,748,319	+		ABI39_RS18830	0.51	-1.0
4,748,348	-		ABI39_RS18830	0.53	-1.4
4,748,379	+		ABI39_RS18830	0.54	-0.0
4,748,403	-		ABI39_RS18830	0.56	-1.0
4,748,405	-		ABI39_RS18830	0.56	-1.1
4,748,436	-		ABI39_RS18830	0.58	-1.2
4,748,496	-		ABI39_RS18830	0.62	-0.4
4,748,672	+		ABI39_RS18830	0.72	-1.2
4,748,673	-		ABI39_RS18830	0.72	-0.4
4,748,752	+		ABI39_RS18830	0.77	-1.5
4,748,864	+		ABI39_RS18830	0.84	-2.7
4,748,866	+		ABI39_RS18830	0.84	-1.3
4,748,866	+		ABI39_RS18830	0.84	-1.4
4,748,900	-		ABI39_RS18830	0.86	-0.3
4,749,046	-				-1.4
4,749,105	+				-1.4
4,749,129	+				-1.3
4,749,129	+				-2.3
4,749,129	+				-1.8
4,749,141	+				-1.5
4,749,149	+				-2.1
4,749,150	-				+0.7
4,749,152	-				+0.7
4,749,158	+				-2.4
4,749,178	+				-0.4
4,749,179	-				-0.6
4,749,332	+				+0.6
4,749,332	+				-1.7
4,749,381	-		ABI39_RS18835	0.13	+0.2
4,749,431	+		ABI39_RS18835	0.16	-2.5
4,749,435	+		ABI39_RS18835	0.16	-1.2
4,749,435	+		ABI39_RS18835	0.16	-2.8
4,749,436	-		ABI39_RS18835	0.16	+0.4
4,749,437	+		ABI39_RS18835	0.16	-2.1
4,749,437	+		ABI39_RS18835	0.16	-1.4
4,749,437	+		ABI39_RS18835	0.16	-0.4
4,749,448	+		ABI39_RS18835	0.17	-1.7
4,749,449	-		ABI39_RS18835	0.17	-0.5
4,749,542	-		ABI39_RS18835	0.22	-0.6
4,749,542	-		ABI39_RS18835	0.22	-0.1
4,749,544	+		ABI39_RS18835	0.23	-1.2
4,749,694	+		ABI39_RS18835	0.31	-1.4
4,749,695	-		ABI39_RS18835	0.32	-1.3
4,749,840	-		ABI39_RS18835	0.40	+0.7
4,749,843	-		ABI39_RS18835	0.40	+0.5
4,749,977	+		ABI39_RS18835	0.48	-2.0
4,749,977	+		ABI39_RS18835	0.48	-2.0
4,749,988	-		ABI39_RS18835	0.49	-0.9
4,750,055	+		ABI39_RS18835	0.53	-2.0
4,750,084	+		ABI39_RS18835	0.55	-0.7
4,750,130	+		ABI39_RS18835	0.58	+1.8
4,750,132	+		ABI39_RS18835	0.58	-1.9
4,750,132	+		ABI39_RS18835	0.58	-1.2
4,750,138	+		ABI39_RS18835	0.58	-2.6
4,750,145	+		ABI39_RS18835	0.58	+0.3
4,750,310	-		ABI39_RS18835	0.68	+0.5
4,750,547	+		ABI39_RS18835	0.83	-1.3
4,750,606	-		ABI39_RS18835	0.86	+0.1
4,750,631	+		ABI39_RS18835	0.88	-2.3
4,750,632	-		ABI39_RS18835	0.88	-1.1
4,750,632	-		ABI39_RS18835	0.88	+0.2
4,750,641	-		ABI39_RS18835	0.88	+0.0
4,750,944	+				+0.4
4,751,031	+				+0.4
4,751,131	+				+0.8
4,751,131	+				+1.2
4,751,136	-				+0.1
4,751,136	-				-0.6
4,751,208	+		ABI39_RS18840	0.16	-1.0
4,751,209	-		ABI39_RS18840	0.16	-0.2
4,751,213	+		ABI39_RS18840	0.17	+0.3
4,751,214	-		ABI39_RS18840	0.17	+0.2
4,751,214	-		ABI39_RS18840	0.17	+0.6
4,751,214	-		ABI39_RS18840	0.17	+1.1
4,751,225	-		ABI39_RS18840	0.18	-0.1
4,751,246	+		ABI39_RS18840	0.20	+0.1
4,751,247	-		ABI39_RS18840	0.20	-0.0
4,751,289	+		ABI39_RS18840	0.24	-0.9
4,751,290	-		ABI39_RS18840	0.24	+0.0
4,751,308	-		ABI39_RS18840	0.25	+0.2
4,751,311	+		ABI39_RS18840	0.26	-0.4
4,751,311	+		ABI39_RS18840	0.26	+0.3
4,751,312	-		ABI39_RS18840	0.26	-0.2
4,751,503	-		ABI39_RS18840	0.43	-0.9
4,751,668	-		ABI39_RS18840	0.58	+0.5
4,751,675	+		ABI39_RS18840	0.59	+0.1
4,751,705	+		ABI39_RS18840	0.62	-0.6
4,751,752	-		ABI39_RS18840	0.66	+0.2