Experiment: Control_ECRC101_WM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt gsk and aes are separated by 151 nucleotides aes and hemH overlap by 4 nucleotides
MCAODC_27355: gsk - inosine/guanosine kinase, at 2,213,262 to 2,214,566
gsk
MCAODC_27360: aes - acetyl esterase, at 2,214,718 to 2,215,677
aes
MCAODC_27365: hemH - ferrochelatase, at 2,215,674 to 2,216,636
hemH
Position (kb)
2214
2215
2216 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2213.820 kb on - strand, within gsk at 2213.879 kb on + strand, within gsk at 2213.879 kb on + strand, within gsk at 2213.879 kb on + strand, within gsk at 2213.879 kb on + strand, within gsk at 2213.880 kb on - strand, within gsk at 2213.880 kb on - strand, within gsk at 2213.880 kb on - strand, within gsk at 2213.904 kb on + strand, within gsk at 2213.905 kb on - strand, within gsk at 2213.910 kb on - strand, within gsk at 2213.910 kb on - strand, within gsk at 2213.912 kb on - strand, within gsk at 2213.912 kb on - strand, within gsk at 2214.033 kb on - strand, within gsk at 2214.080 kb on + strand, within gsk at 2214.080 kb on + strand, within gsk at 2214.081 kb on - strand, within gsk at 2214.081 kb on - strand, within gsk at 2214.141 kb on + strand, within gsk at 2214.145 kb on + strand, within gsk at 2214.145 kb on + strand, within gsk at 2214.146 kb on - strand, within gsk at 2214.149 kb on + strand, within gsk at 2214.149 kb on + strand, within gsk at 2214.149 kb on + strand, within gsk at 2214.150 kb on - strand, within gsk at 2214.150 kb on - strand, within gsk at 2214.150 kb on - strand, within gsk at 2214.174 kb on - strand, within gsk at 2214.174 kb on - strand, within gsk at 2214.187 kb on + strand, within gsk at 2214.188 kb on - strand, within gsk at 2214.193 kb on + strand, within gsk at 2214.193 kb on + strand, within gsk at 2214.193 kb on + strand, within gsk at 2214.193 kb on + strand, within gsk at 2214.194 kb on - strand, within gsk at 2214.194 kb on - strand, within gsk at 2214.194 kb on - strand, within gsk at 2214.194 kb on - strand, within gsk at 2214.210 kb on - strand, within gsk at 2214.262 kb on + strand, within gsk at 2214.263 kb on - strand, within gsk at 2214.263 kb on - strand, within gsk at 2214.263 kb on - strand, within gsk at 2214.263 kb on - strand, within gsk at 2214.266 kb on + strand, within gsk at 2214.267 kb on - strand, within gsk at 2214.309 kb on - strand, within gsk at 2214.327 kb on + strand, within gsk at 2214.338 kb on - strand, within gsk at 2214.352 kb on - strand, within gsk at 2214.395 kb on - strand, within gsk at 2214.459 kb on + strand at 2214.532 kb on + strand at 2214.533 kb on - strand at 2214.533 kb on - strand at 2214.533 kb on - strand at 2214.533 kb on - strand at 2214.546 kb on - strand at 2214.687 kb on + strand at 2214.688 kb on - strand at 2214.718 kb on - strand at 2214.753 kb on + strand at 2214.753 kb on + strand at 2214.783 kb on + strand at 2214.844 kb on + strand, within aes at 2214.844 kb on + strand, within aes at 2214.844 kb on + strand, within aes at 2214.845 kb on - strand, within aes at 2214.845 kb on - strand, within aes at 2214.847 kb on + strand, within aes at 2214.848 kb on - strand, within aes at 2214.904 kb on + strand, within aes at 2214.905 kb on - strand, within aes at 2214.905 kb on - strand, within aes at 2214.905 kb on - strand, within aes at 2214.922 kb on + strand, within aes at 2214.977 kb on + strand, within aes at 2214.977 kb on + strand, within aes at 2214.978 kb on - strand, within aes at 2215.002 kb on + strand, within aes at 2215.003 kb on - strand, within aes at 2215.003 kb on - strand, within aes at 2215.054 kb on + strand, within aes at 2215.055 kb on - strand, within aes at 2215.065 kb on + strand, within aes at 2215.065 kb on + strand, within aes at 2215.077 kb on + strand, within aes at 2215.077 kb on + strand, within aes at 2215.084 kb on + strand, within aes at 2215.085 kb on - strand, within aes at 2215.085 kb on - strand, within aes at 2215.147 kb on + strand, within aes at 2215.147 kb on + strand, within aes at 2215.148 kb on - strand, within aes at 2215.172 kb on - strand, within aes at 2215.182 kb on + strand, within aes at 2215.182 kb on + strand, within aes at 2215.182 kb on + strand, within aes at 2215.387 kb on + strand, within aes at 2215.388 kb on - strand, within aes at 2215.399 kb on + strand, within aes at 2215.399 kb on + strand, within aes at 2215.435 kb on + strand, within aes at 2215.435 kb on + strand, within aes at 2215.436 kb on - strand, within aes at 2215.449 kb on + strand, within aes at 2215.449 kb on + strand, within aes at 2215.482 kb on + strand, within aes at 2215.576 kb on + strand, within aes at 2215.576 kb on + strand, within aes at 2215.577 kb on - strand, within aes at 2215.606 kb on + strand at 2215.606 kb on + strand at 2215.662 kb on + strand at 2216.667 kb on - strand at 2216.672 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Control_ECRC101_WM remove 2,213,820 - gsk MCAODC_27355 0.43 -1.0 2,213,879 + gsk MCAODC_27355 0.47 -0.1 2,213,879 + gsk MCAODC_27355 0.47 +1.2 2,213,879 + gsk MCAODC_27355 0.47 +0.7 2,213,879 + gsk MCAODC_27355 0.47 -0.1 2,213,880 - gsk MCAODC_27355 0.47 +0.4 2,213,880 - gsk MCAODC_27355 0.47 -0.1 2,213,880 - gsk MCAODC_27355 0.47 +1.2 2,213,904 + gsk MCAODC_27355 0.49 +0.5 2,213,905 - gsk MCAODC_27355 0.49 +0.7 2,213,910 - gsk MCAODC_27355 0.50 +0.5 2,213,910 - gsk MCAODC_27355 0.50 +0.3 2,213,912 - gsk MCAODC_27355 0.50 +0.9 2,213,912 - gsk MCAODC_27355 0.50 +0.4 2,214,033 - gsk MCAODC_27355 0.59 -0.3 2,214,080 + gsk MCAODC_27355 0.63 -2.1 2,214,080 + gsk MCAODC_27355 0.63 +0.4 2,214,081 - gsk MCAODC_27355 0.63 +0.6 2,214,081 - gsk MCAODC_27355 0.63 -0.2 2,214,141 + gsk MCAODC_27355 0.67 -0.2 2,214,145 + gsk MCAODC_27355 0.68 +0.3 2,214,145 + gsk MCAODC_27355 0.68 +1.3 2,214,146 - gsk MCAODC_27355 0.68 -0.0 2,214,149 + gsk MCAODC_27355 0.68 +1.2 2,214,149 + gsk MCAODC_27355 0.68 +0.6 2,214,149 + gsk MCAODC_27355 0.68 +0.3 2,214,150 - gsk MCAODC_27355 0.68 -0.4 2,214,150 - gsk MCAODC_27355 0.68 +0.2 2,214,150 - gsk MCAODC_27355 0.68 -0.0 2,214,174 - gsk MCAODC_27355 0.70 +1.0 2,214,174 - gsk MCAODC_27355 0.70 -0.1 2,214,187 + gsk MCAODC_27355 0.71 +0.2 2,214,188 - gsk MCAODC_27355 0.71 +1.3 2,214,193 + gsk MCAODC_27355 0.71 +0.7 2,214,193 + gsk MCAODC_27355 0.71 +0.6 2,214,193 + gsk MCAODC_27355 0.71 -0.2 2,214,193 + gsk MCAODC_27355 0.71 -0.6 2,214,194 - gsk MCAODC_27355 0.71 -0.2 2,214,194 - gsk MCAODC_27355 0.71 +0.3 2,214,194 - gsk MCAODC_27355 0.71 -0.2 2,214,194 - gsk MCAODC_27355 0.71 -0.5 2,214,210 - gsk MCAODC_27355 0.73 +0.7 2,214,262 + gsk MCAODC_27355 0.77 +0.4 2,214,263 - gsk MCAODC_27355 0.77 +0.5 2,214,263 - gsk MCAODC_27355 0.77 -0.4 2,214,263 - gsk MCAODC_27355 0.77 +0.1 2,214,263 - gsk MCAODC_27355 0.77 +1.1 2,214,266 + gsk MCAODC_27355 0.77 -0.1 2,214,267 - gsk MCAODC_27355 0.77 +0.7 2,214,309 - gsk MCAODC_27355 0.80 -0.9 2,214,327 + gsk MCAODC_27355 0.82 +0.6 2,214,338 - gsk MCAODC_27355 0.82 -1.4 2,214,352 - gsk MCAODC_27355 0.84 +1.4 2,214,395 - gsk MCAODC_27355 0.87 -0.1 2,214,459 + +0.9 2,214,532 + +0.3 2,214,533 - +1.7 2,214,533 - -0.4 2,214,533 - +1.0 2,214,533 - +0.1 2,214,546 - -1.3 2,214,687 + -0.5 2,214,688 - -0.9 2,214,718 - +0.6 2,214,753 + +0.9 2,214,753 + +0.3 2,214,783 + +0.9 2,214,844 + aes MCAODC_27360 0.13 +0.8 2,214,844 + aes MCAODC_27360 0.13 +0.8 2,214,844 + aes MCAODC_27360 0.13 +0.8 2,214,845 - aes MCAODC_27360 0.13 -0.7 2,214,845 - aes MCAODC_27360 0.13 -0.7 2,214,847 + aes MCAODC_27360 0.13 +0.6 2,214,848 - aes MCAODC_27360 0.14 +0.3 2,214,904 + aes MCAODC_27360 0.19 -2.2 2,214,905 - aes MCAODC_27360 0.19 +1.1 2,214,905 - aes MCAODC_27360 0.19 -0.2 2,214,905 - aes MCAODC_27360 0.19 +1.0 2,214,922 + aes MCAODC_27360 0.21 -0.4 2,214,977 + aes MCAODC_27360 0.27 -0.2 2,214,977 + aes MCAODC_27360 0.27 -0.7 2,214,978 - aes MCAODC_27360 0.27 +0.3 2,215,002 + aes MCAODC_27360 0.30 -0.1 2,215,003 - aes MCAODC_27360 0.30 -0.4 2,215,003 - aes MCAODC_27360 0.30 -0.0 2,215,054 + aes MCAODC_27360 0.35 -0.3 2,215,055 - aes MCAODC_27360 0.35 +1.1 2,215,065 + aes MCAODC_27360 0.36 -0.5 2,215,065 + aes MCAODC_27360 0.36 -0.9 2,215,077 + aes MCAODC_27360 0.37 +0.3 2,215,077 + aes MCAODC_27360 0.37 -1.5 2,215,084 + aes MCAODC_27360 0.38 -0.5 2,215,085 - aes MCAODC_27360 0.38 +0.6 2,215,085 - aes MCAODC_27360 0.38 -0.2 2,215,147 + aes MCAODC_27360 0.45 -0.3 2,215,147 + aes MCAODC_27360 0.45 -0.5 2,215,148 - aes MCAODC_27360 0.45 -1.0 2,215,172 - aes MCAODC_27360 0.47 +1.4 2,215,182 + aes MCAODC_27360 0.48 +0.3 2,215,182 + aes MCAODC_27360 0.48 +0.8 2,215,182 + aes MCAODC_27360 0.48 -0.1 2,215,387 + aes MCAODC_27360 0.70 -0.6 2,215,388 - aes MCAODC_27360 0.70 +0.3 2,215,399 + aes MCAODC_27360 0.71 -1.6 2,215,399 + aes MCAODC_27360 0.71 +0.1 2,215,435 + aes MCAODC_27360 0.75 +0.1 2,215,435 + aes MCAODC_27360 0.75 +0.7 2,215,436 - aes MCAODC_27360 0.75 -0.2 2,215,449 + aes MCAODC_27360 0.76 -0.3 2,215,449 + aes MCAODC_27360 0.76 +1.8 2,215,482 + aes MCAODC_27360 0.80 +0.4 2,215,576 + aes MCAODC_27360 0.89 -0.5 2,215,576 + aes MCAODC_27360 0.89 +1.1 2,215,577 - aes MCAODC_27360 0.89 -0.1 2,215,606 + -0.0 2,215,606 + -0.2 2,215,662 + -0.2 2,216,667 - +0.1 2,216,672 + +0.6
Or see this region's nucleotide sequence