Experiment: Control_ECRC101_WM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ydcK and tehA are separated by 123 nucleotides tehA and tehB overlap by 4 nucleotides tehB and ydcL are separated by 303 nucleotides
MCAODC_16305: ydcK - YdcK family protein, at 154,541 to 155,521
ydcK
MCAODC_16310: tehA - dicarboxylate transporter/tellurite-resistance protein TehA, at 155,645 to 156,637
tehA
MCAODC_16315: tehB - tellurite resistance methyltransferase TehB, at 156,634 to 157,227
tehB
MCAODC_16320: ydcL - Uncharacterized lipoprotein YdcL, at 157,531 to 158,199
ydcL
Position (kb) 155
156
157 Strain fitness (log2 ratio) -2
-1
0
1 at 154.713 kb on - strand, within ydcK at 155.416 kb on + strand, within ydcK at 155.544 kb on - strand at 155.546 kb on + strand at 155.546 kb on + strand at 155.547 kb on - strand at 155.547 kb on - strand at 155.547 kb on - strand at 155.547 kb on - strand at 155.547 kb on - strand at 155.547 kb on - strand at 155.547 kb on - strand at 155.547 kb on - strand at 155.547 kb on - strand at 155.549 kb on - strand at 155.638 kb on + strand at 155.835 kb on + strand, within tehA at 155.836 kb on - strand, within tehA at 156.052 kb on + strand, within tehA at 156.055 kb on + strand, within tehA at 156.069 kb on - strand, within tehA at 156.094 kb on + strand, within tehA at 156.365 kb on - strand, within tehA at 156.365 kb on - strand, within tehA at 156.369 kb on + strand, within tehA at 156.370 kb on - strand, within tehA at 156.370 kb on - strand, within tehA at 156.386 kb on + strand, within tehA at 156.404 kb on - strand, within tehA at 156.436 kb on - strand, within tehA at 156.518 kb on - strand, within tehA at 156.535 kb on + strand, within tehA at 156.536 kb on - strand, within tehA at 156.543 kb on + strand at 156.543 kb on + strand at 157.135 kb on + strand, within tehB at 157.186 kb on - strand at 157.189 kb on - strand at 157.275 kb on - strand at 157.389 kb on + strand at 157.411 kb on + strand at 157.497 kb on + strand at 157.498 kb on - strand at 157.508 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Control_ECRC101_WM remove 154,713 - ydcK MCAODC_16305 0.18 -0.2 155,416 + ydcK MCAODC_16305 0.89 -0.2 155,544 - -0.2 155,546 + +0.6 155,546 + -0.5 155,547 - +1.6 155,547 - -1.6 155,547 - +0.9 155,547 - -0.0 155,547 - +1.5 155,547 - +0.7 155,547 - -0.0 155,547 - +1.2 155,547 - -1.7 155,549 - -1.8 155,638 + +1.0 155,835 + tehA MCAODC_16310 0.19 -0.7 155,836 - tehA MCAODC_16310 0.19 +0.5 156,052 + tehA MCAODC_16310 0.41 +0.5 156,055 + tehA MCAODC_16310 0.41 +0.3 156,069 - tehA MCAODC_16310 0.43 -1.0 156,094 + tehA MCAODC_16310 0.45 +1.5 156,365 - tehA MCAODC_16310 0.73 -1.1 156,365 - tehA MCAODC_16310 0.73 +1.5 156,369 + tehA MCAODC_16310 0.73 +0.7 156,370 - tehA MCAODC_16310 0.73 +0.1 156,370 - tehA MCAODC_16310 0.73 +1.6 156,386 + tehA MCAODC_16310 0.75 -0.9 156,404 - tehA MCAODC_16310 0.76 +0.6 156,436 - tehA MCAODC_16310 0.80 +0.2 156,518 - tehA MCAODC_16310 0.88 -0.4 156,535 + tehA MCAODC_16310 0.90 -2.1 156,536 - tehA MCAODC_16310 0.90 +0.8 156,543 + +0.1 156,543 + +0.4 157,135 + tehB MCAODC_16315 0.84 -0.1 157,186 - -0.9 157,189 - -1.1 157,275 - -1.0 157,389 + -1.5 157,411 + +1.3 157,497 + +1.0 157,498 - -0.5 157,508 - -0.7
Or see this region's nucleotide sequence