Experiment: Control_ECRC101_WM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt pyrG and eno are separated by 87 nucleotides eno and ygcG are separated by 59 nucleotides ygcG and ygcG overlap by 4 nucleotides
MCAODC_10795: pyrG - CTP synthase (glutamine hydrolyzing), at 2,152,732 to 2,154,369
pyrG
MCAODC_10800: eno - phosphopyruvate hydratase, at 2,154,457 to 2,155,755
eno
MCAODC_10805: ygcG - TPM-phosphatase domain-containing protein, at 2,155,815 to 2,156,729
ygcG
MCAODC_10810: ygcG - TPM-phosphatase domain-containing protein, at 2,156,726 to 2,157,874
ygcG
Position (kb)
2154
2155
2156 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2154.367 kb on + strand at 2154.371 kb on + strand at 2154.371 kb on + strand at 2154.432 kb on + strand at 2155.732 kb on - strand at 2155.753 kb on + strand at 2155.753 kb on + strand at 2155.754 kb on - strand at 2155.805 kb on + strand at 2155.941 kb on - strand, within ygcG at 2155.941 kb on - strand, within ygcG at 2156.089 kb on - strand, within ygcG at 2156.098 kb on + strand, within ygcG at 2156.099 kb on - strand, within ygcG at 2156.178 kb on + strand, within ygcG at 2156.179 kb on - strand, within ygcG at 2156.181 kb on - strand, within ygcG at 2156.185 kb on - strand, within ygcG at 2156.216 kb on + strand, within ygcG at 2156.221 kb on + strand, within ygcG at 2156.221 kb on + strand, within ygcG at 2156.222 kb on - strand, within ygcG at 2156.292 kb on + strand, within ygcG at 2156.335 kb on - strand, within ygcG at 2156.335 kb on - strand, within ygcG at 2156.335 kb on - strand, within ygcG at 2156.336 kb on + strand, within ygcG at 2156.437 kb on - strand, within ygcG at 2156.442 kb on - strand, within ygcG at 2156.459 kb on + strand, within ygcG at 2156.460 kb on - strand, within ygcG at 2156.460 kb on - strand, within ygcG at 2156.460 kb on - strand, within ygcG at 2156.493 kb on - strand, within ygcG at 2156.493 kb on - strand, within ygcG at 2156.535 kb on + strand, within ygcG at 2156.535 kb on + strand, within ygcG at 2156.536 kb on - strand, within ygcG at 2156.538 kb on + strand, within ygcG at 2156.538 kb on + strand, within ygcG at 2156.561 kb on + strand, within ygcG at 2156.562 kb on - strand, within ygcG at 2156.567 kb on + strand, within ygcG at 2156.568 kb on - strand, within ygcG at 2156.700 kb on + strand at 2156.705 kb on + strand at 2156.713 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Control_ECRC101_WM remove 2,154,367 + -0.2 2,154,371 + +2.1 2,154,371 + +0.9 2,154,432 + -0.2 2,155,732 - +1.0 2,155,753 + -0.4 2,155,753 + -1.3 2,155,754 - +0.5 2,155,805 + -0.5 2,155,941 - ygcG MCAODC_10805 0.14 +0.1 2,155,941 - ygcG MCAODC_10805 0.14 -0.9 2,156,089 - ygcG MCAODC_10805 0.30 -0.1 2,156,098 + ygcG MCAODC_10805 0.31 -2.0 2,156,099 - ygcG MCAODC_10805 0.31 -0.8 2,156,178 + ygcG MCAODC_10805 0.40 +0.2 2,156,179 - ygcG MCAODC_10805 0.40 -0.1 2,156,181 - ygcG MCAODC_10805 0.40 +1.5 2,156,185 - ygcG MCAODC_10805 0.40 -1.3 2,156,216 + ygcG MCAODC_10805 0.44 -2.1 2,156,221 + ygcG MCAODC_10805 0.44 -0.3 2,156,221 + ygcG MCAODC_10805 0.44 +0.1 2,156,222 - ygcG MCAODC_10805 0.44 +0.3 2,156,292 + ygcG MCAODC_10805 0.52 +1.1 2,156,335 - ygcG MCAODC_10805 0.57 +0.3 2,156,335 - ygcG MCAODC_10805 0.57 -0.3 2,156,335 - ygcG MCAODC_10805 0.57 +0.1 2,156,336 + ygcG MCAODC_10805 0.57 -0.5 2,156,437 - ygcG MCAODC_10805 0.68 +0.6 2,156,442 - ygcG MCAODC_10805 0.69 +0.6 2,156,459 + ygcG MCAODC_10805 0.70 +1.6 2,156,460 - ygcG MCAODC_10805 0.70 +0.4 2,156,460 - ygcG MCAODC_10805 0.70 -0.5 2,156,460 - ygcG MCAODC_10805 0.70 +0.3 2,156,493 - ygcG MCAODC_10805 0.74 -0.9 2,156,493 - ygcG MCAODC_10805 0.74 -1.9 2,156,535 + ygcG MCAODC_10805 0.79 -1.1 2,156,535 + ygcG MCAODC_10805 0.79 +0.3 2,156,536 - ygcG MCAODC_10805 0.79 -0.2 2,156,538 + ygcG MCAODC_10805 0.79 +0.6 2,156,538 + ygcG MCAODC_10805 0.79 +0.6 2,156,561 + ygcG MCAODC_10805 0.82 +0.2 2,156,562 - ygcG MCAODC_10805 0.82 +0.2 2,156,567 + ygcG MCAODC_10805 0.82 +1.6 2,156,568 - ygcG MCAODC_10805 0.82 +1.0 2,156,700 + -0.1 2,156,705 + -0.0 2,156,713 - +0.7
Or see this region's nucleotide sequence