Experiment: Control_ECRC101_WM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt mazG and pyrG are separated by 227 nucleotides pyrG and eno are separated by 87 nucleotides
MCAODC_10790: mazG - nucleoside triphosphate pyrophosphohydrolase, at 2,151,713 to 2,152,504
mazG
MCAODC_10795: pyrG - CTP synthase (glutamine hydrolyzing), at 2,152,732 to 2,154,369
pyrG
MCAODC_10800: eno - phosphopyruvate hydratase, at 2,154,457 to 2,155,755
eno
Position (kb)
2152
2153
2154
2155 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2151.739 kb on + strand at 2151.740 kb on - strand at 2151.740 kb on - strand at 2151.740 kb on - strand at 2151.742 kb on + strand at 2151.742 kb on + strand at 2151.742 kb on + strand at 2151.742 kb on + strand at 2151.743 kb on - strand at 2151.743 kb on - strand at 2151.743 kb on - strand at 2151.743 kb on - strand at 2151.743 kb on - strand at 2151.816 kb on - strand, within mazG at 2151.834 kb on - strand, within mazG at 2151.917 kb on + strand, within mazG at 2151.917 kb on + strand, within mazG at 2151.962 kb on - strand, within mazG at 2151.982 kb on + strand, within mazG at 2151.988 kb on - strand, within mazG at 2152.115 kb on - strand, within mazG at 2152.115 kb on - strand, within mazG at 2152.123 kb on + strand, within mazG at 2152.124 kb on - strand, within mazG at 2152.244 kb on + strand, within mazG at 2152.244 kb on + strand, within mazG at 2152.244 kb on + strand, within mazG at 2152.276 kb on + strand, within mazG at 2152.512 kb on - strand at 2152.577 kb on + strand at 2152.591 kb on + strand at 2154.367 kb on + strand at 2154.371 kb on + strand at 2154.371 kb on + strand at 2154.432 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Control_ECRC101_WM remove 2,151,739 + +1.0 2,151,740 - -0.5 2,151,740 - -0.5 2,151,740 - -0.3 2,151,742 + +0.3 2,151,742 + -0.1 2,151,742 + +0.5 2,151,742 + +0.1 2,151,743 - +0.8 2,151,743 - -0.5 2,151,743 - +2.1 2,151,743 - +0.6 2,151,743 - -0.3 2,151,816 - mazG MCAODC_10790 0.13 +0.9 2,151,834 - mazG MCAODC_10790 0.15 -0.0 2,151,917 + mazG MCAODC_10790 0.26 +0.7 2,151,917 + mazG MCAODC_10790 0.26 +0.5 2,151,962 - mazG MCAODC_10790 0.31 -0.2 2,151,982 + mazG MCAODC_10790 0.34 +0.5 2,151,988 - mazG MCAODC_10790 0.35 +0.8 2,152,115 - mazG MCAODC_10790 0.51 +1.2 2,152,115 - mazG MCAODC_10790 0.51 +0.3 2,152,123 + mazG MCAODC_10790 0.52 -0.7 2,152,124 - mazG MCAODC_10790 0.52 -1.7 2,152,244 + mazG MCAODC_10790 0.67 +0.0 2,152,244 + mazG MCAODC_10790 0.67 +1.9 2,152,244 + mazG MCAODC_10790 0.67 -2.0 2,152,276 + mazG MCAODC_10790 0.71 +0.1 2,152,512 - -0.3 2,152,577 + -0.7 2,152,591 + +0.7 2,154,367 + -0.2 2,154,371 + +2.1 2,154,371 + +0.9 2,154,432 + -0.2
Or see this region's nucleotide sequence