Experiment: beta-Cyclodextrin 2.5 mg/ml (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABI39_RS19645 and ABI39_RS19650 overlap by 17 nucleotides ABI39_RS19650 and ABI39_RS19655 are separated by 1 nucleotides
ABI39_RS19645: ABI39_RS19645 - hypothetical protein, at 4,884,180 to 4,885,202
_RS19645
ABI39_RS19650: ABI39_RS19650 - hypothetical protein, at 4,885,186 to 4,885,419
_RS19650
ABI39_RS19655: ABI39_RS19655 - hypothetical protein, at 4,885,421 to 4,886,626
_RS19655
Position (kb) 4885
4886 Strain fitness (log2 ratio) -1
0
1 at 4884.217 kb on + strand at 4884.341 kb on + strand, within ABI39_RS19645 at 4884.343 kb on + strand, within ABI39_RS19645 at 4884.426 kb on + strand, within ABI39_RS19645 at 4884.611 kb on + strand, within ABI39_RS19645 at 4884.621 kb on + strand, within ABI39_RS19645 at 4884.625 kb on + strand, within ABI39_RS19645 at 4884.684 kb on + strand, within ABI39_RS19645 at 4885.242 kb on + strand, within ABI39_RS19650 at 4885.315 kb on + strand, within ABI39_RS19650 at 4885.316 kb on - strand, within ABI39_RS19650 at 4885.419 kb on + strand at 4885.436 kb on + strand at 4885.436 kb on + strand at 4885.690 kb on + strand, within ABI39_RS19655 at 4885.690 kb on + strand, within ABI39_RS19655 at 4885.694 kb on + strand, within ABI39_RS19655 at 4885.957 kb on + strand, within ABI39_RS19655 at 4885.957 kb on + strand, within ABI39_RS19655 at 4885.996 kb on + strand, within ABI39_RS19655 at 4886.016 kb on + strand, within ABI39_RS19655 at 4886.157 kb on + strand, within ABI39_RS19655 at 4886.157 kb on + strand, within ABI39_RS19655 at 4886.215 kb on + strand, within ABI39_RS19655 at 4886.330 kb on + strand, within ABI39_RS19655 at 4886.330 kb on + strand, within ABI39_RS19655 at 4886.330 kb on + strand, within ABI39_RS19655 at 4886.330 kb on + strand, within ABI39_RS19655 at 4886.330 kb on + strand, within ABI39_RS19655 at 4886.332 kb on + strand, within ABI39_RS19655
Per-strain Table
Position Strand Gene LocusTag Fraction beta-Cyclodextrin 2.5 mg/ml (C) remove 4,884,217 + -1.5 4,884,341 + ABI39_RS19645 0.16 -0.1 4,884,343 + ABI39_RS19645 0.16 +0.7 4,884,426 + ABI39_RS19645 0.24 +0.5 4,884,611 + ABI39_RS19645 0.42 -0.3 4,884,621 + ABI39_RS19645 0.43 +0.3 4,884,625 + ABI39_RS19645 0.43 -1.1 4,884,684 + ABI39_RS19645 0.49 -0.9 4,885,242 + ABI39_RS19650 0.24 -0.2 4,885,315 + ABI39_RS19650 0.55 -0.9 4,885,316 - ABI39_RS19650 0.56 -0.8 4,885,419 + +1.0 4,885,436 + -0.7 4,885,436 + +0.2 4,885,690 + ABI39_RS19655 0.22 +0.5 4,885,690 + ABI39_RS19655 0.22 +0.7 4,885,694 + ABI39_RS19655 0.23 +0.0 4,885,957 + ABI39_RS19655 0.44 -0.9 4,885,957 + ABI39_RS19655 0.44 -1.6 4,885,996 + ABI39_RS19655 0.48 +0.2 4,886,016 + ABI39_RS19655 0.49 +0.6 4,886,157 + ABI39_RS19655 0.61 -0.8 4,886,157 + ABI39_RS19655 0.61 -1.4 4,886,215 + ABI39_RS19655 0.66 +0.1 4,886,330 + ABI39_RS19655 0.75 +0.6 4,886,330 + ABI39_RS19655 0.75 -0.2 4,886,330 + ABI39_RS19655 0.75 -0.7 4,886,330 + ABI39_RS19655 0.75 -0.7 4,886,330 + ABI39_RS19655 0.75 +1.0 4,886,332 + ABI39_RS19655 0.76 +0.6
Or see this region's nucleotide sequence