Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS17640

Experiment: beta-Cyclodextrin 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	beta-Cyclodextrin 2.5 mg/ml (C)
4,461,294	+				-1.2
4,461,374	+		ABI39_RS17640	0.13	-3.0
4,461,414	-		ABI39_RS17640	0.19	-1.8
4,461,414	-		ABI39_RS17640	0.19	-2.5
4,461,436	-		ABI39_RS17640	0.22	-2.2
4,461,499	-		ABI39_RS17640	0.30	-1.8
4,461,516	+		ABI39_RS17640	0.33	-3.5
4,461,523	+		ABI39_RS17640	0.34	-1.4
4,461,549	-		ABI39_RS17640	0.37	-1.8
4,461,555	-		ABI39_RS17640	0.38	-2.5
4,461,564	+		ABI39_RS17640	0.39	-1.2
4,461,685	-		ABI39_RS17640	0.55	-2.2
4,461,742	+		ABI39_RS17640	0.63	-0.2
4,461,744	+		ABI39_RS17640	0.63	-1.2
4,461,744	+		ABI39_RS17640	0.63	-3.5
4,461,750	-		ABI39_RS17640	0.64	-1.8
4,461,787	-		ABI39_RS17640	0.69	-1.2
4,461,815	-		ABI39_RS17640	0.73	-1.2
4,461,877	+		ABI39_RS17640	0.81	-1.5
4,462,173	+		ABI39_RS17645	0.64	-0.5
4,462,234	+		ABI39_RS17645	0.89	+0.1
4,462,320	-				+0.9
4,462,320	-				-0.1
4,462,332	+				-1.1
4,462,336	+				-0.8
4,462,374	+				+1.8
4,462,384	-				+0.0
4,462,384	-				-0.1
4,462,392	-				-0.2
4,462,428	-				+1.3
4,462,432	+				-0.4
4,462,444	+				+0.6
4,462,448	+				+0.2
4,462,466	+				+0.8
4,462,588	+				-0.2
4,462,621	+				+0.6
4,462,643	-				+0.5
4,462,658	+				-0.2
4,462,716	-				-0.4
4,462,745	+				+0.8
4,462,826	-				+0.3
4,462,851	+				+0.3
4,462,852	-				+0.4
4,462,852	-				-0.6
4,462,855	+				+0.5
4,462,855	+				+0.7
4,462,855	+				-0.4
4,462,855	+				+1.1
4,462,856	-				+0.5
4,462,856	-				-0.5
4,462,857	+				-0.2
4,462,917	-				+0.2
4,462,917	-				-0.6
4,462,918	+				+0.6
4,462,926	+				+1.2