Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS16880

Experiment: beta-Cyclodextrin 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	beta-Cyclodextrin 2.5 mg/ml (C)
4,281,367	-		ABI39_RS16875	0.24	-0.8
4,281,396	-		ABI39_RS16875	0.26	-1.2
4,281,406	-		ABI39_RS16875	0.27	-1.2
4,281,590	+		ABI39_RS16875	0.42	-1.8
4,281,596	+		ABI39_RS16875	0.43	-0.2
4,281,715	+		ABI39_RS16875	0.52	-1.2
4,282,113	+		ABI39_RS16875	0.85	-1.8
4,282,114	-		ABI39_RS16875	0.85	-0.2
4,282,144	+		ABI39_RS16875	0.88	-1.2
4,282,232	+				+0.8
4,282,280	+				-0.9
4,282,281	-				-0.2
4,282,287	+				-0.5
4,282,315	-				-1.8
4,282,317	+				-0.2
4,282,317	+				-0.2
4,282,318	-				-2.5
4,282,324	+				-0.2
4,282,324	+				-1.8
4,282,325	-				-0.2
4,282,326	+				-1.8
4,282,326	+				-1.2
4,282,329	+				-1.2
4,282,410	+		ABI39_RS16880	0.16	-1.6
4,282,410	+		ABI39_RS16880	0.16	-1.2
4,282,411	-		ABI39_RS16880	0.16	-1.2
4,282,411	-		ABI39_RS16880	0.16	-0.2
4,282,411	-		ABI39_RS16880	0.16	-0.2
4,282,462	+		ABI39_RS16880	0.24	-1.8
4,282,571	-		ABI39_RS16880	0.40	+0.8
4,282,619	+		ABI39_RS16880	0.47	-1.5
4,282,636	+		ABI39_RS16880	0.49	+0.8
4,282,637	-		ABI39_RS16880	0.49	-1.8
4,282,715	+		ABI39_RS16880	0.61	-0.2
4,282,779	+		ABI39_RS16880	0.71	-2.2
4,282,919	+				-1.2
4,282,932	+				-0.2
4,282,951	+				-1.8
4,282,951	+				-1.8
4,282,975	+				-2.2
4,283,208	+		ABI39_RS16885	0.33	-1.6
4,283,291	+		ABI39_RS16885	0.46	-0.2
4,283,311	+		ABI39_RS16885	0.49	-1.5
4,283,316	-		ABI39_RS16885	0.50	-1.8
4,283,338	-		ABI39_RS16885	0.54	-0.2
4,283,367	+		ABI39_RS16885	0.58	-2.8
4,283,665	+				-1.8
4,283,681	-				-1.2
4,283,771	+		ABI39_RS16890	0.19	-1.8
4,283,808	-		ABI39_RS16890	0.25	-1.2
4,283,874	-		ABI39_RS16890	0.36	-0.2