Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS14225

Experiment: beta-Cyclodextrin 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	beta-Cyclodextrin 2.5 mg/ml (C)
3,697,393	+		ABI39_RS14220	0.53	+0.7
3,697,445	-		ABI39_RS14220	0.56	+0.4
3,697,499	-		ABI39_RS14220	0.59	-0.6
3,697,499	-		ABI39_RS14220	0.59	+0.6
3,697,711	-		ABI39_RS14220	0.70	-0.5
3,697,790	-		ABI39_RS14220	0.74	-1.6
3,697,823	+		ABI39_RS14220	0.75	-0.0
3,697,837	+		ABI39_RS14220	0.76	+0.5
3,697,870	-		ABI39_RS14220	0.78	-2.8
3,697,873	+		ABI39_RS14220	0.78	+0.1
3,698,011	-		ABI39_RS14220	0.85	-2.1
3,698,273	+				+0.7
3,698,273	+				-0.4
3,698,274	-				-1.4
3,698,294	+				-0.6
3,698,321	+				-1.1
3,698,322	-				-2.3
3,698,476	-		ABI39_RS14225	0.13	-1.7
3,698,629	-		ABI39_RS14225	0.25	-2.1
3,698,850	+		ABI39_RS14225	0.42	-3.8
3,698,856	-		ABI39_RS14225	0.43	-2.1
3,698,856	-		ABI39_RS14225	0.43	-2.1
3,698,858	-		ABI39_RS14225	0.43	-2.5
3,698,942	-		ABI39_RS14225	0.50	-2.2
3,699,261	+		ABI39_RS14225	0.75	-2.1
3,699,262	-		ABI39_RS14225	0.75	-2.0
3,699,392	+		ABI39_RS14225	0.85	-2.4
3,699,393	-		ABI39_RS14225	0.85	-1.6
3,699,581	-				+0.2
3,699,592	+				-0.7
3,699,608	+				-0.5
3,699,723	+				-1.8
3,699,790	-		ABI39_RS14230	0.14	-0.8
3,699,975	+		ABI39_RS14230	0.27	-1.5
3,699,975	+		ABI39_RS14230	0.27	-1.2
3,699,976	-		ABI39_RS14230	0.27	-1.1
3,700,090	-		ABI39_RS14230	0.35	-1.2
3,700,114	-		ABI39_RS14230	0.37	-1.0
3,700,138	+		ABI39_RS14230	0.38	-0.4
3,700,138	+		ABI39_RS14230	0.38	-0.3
3,700,139	-		ABI39_RS14230	0.38	-0.3
3,700,176	-		ABI39_RS14230	0.41	-0.6
3,700,264	+		ABI39_RS14230	0.47	-0.6
3,700,362	+		ABI39_RS14230	0.54	-1.6
3,700,482	+		ABI39_RS14230	0.63	-1.0
3,700,482	+		ABI39_RS14230	0.63	-0.4
3,700,483	-		ABI39_RS14230	0.63	-1.3
3,700,563	+		ABI39_RS14230	0.68	-1.2
3,700,563	+		ABI39_RS14230	0.68	-0.1