Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS10330

Experiment: beta-Cyclodextrin 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	beta-Cyclodextrin 2.5 mg/ml (C)
2,759,128	-		ABI39_RS10325	0.56	-1.0
2,759,148	+		ABI39_RS10325	0.57	-0.6
2,759,148	+		ABI39_RS10325	0.57	+1.6
2,759,357	+		ABI39_RS10325	0.68	-0.3
2,759,399	+		ABI39_RS10325	0.70	+0.3
2,759,446	-		ABI39_RS10325	0.73	+0.3
2,759,491	-		ABI39_RS10325	0.75	-0.2
2,759,673	+		ABI39_RS10325	0.84	-1.3
2,759,881	+				-0.6
2,759,974	+				-0.5
2,759,977	+				+1.2
2,759,981	+				-0.2
2,759,986	+				-0.3
2,759,986	+				-0.3
2,759,987	-				-0.2
2,759,988	+				-0.7
2,759,991	-				-0.0
2,759,993	-				+0.5
2,760,147	+				-0.2
2,760,147	+				-1.4
2,760,192	+				+0.4
2,760,296	-		ABI39_RS10330	0.15	-1.5
2,760,314	+		ABI39_RS10330	0.15	+0.8
2,760,315	-		ABI39_RS10330	0.15	-0.2
2,760,318	+		ABI39_RS10330	0.16	-0.6
2,760,319	-		ABI39_RS10330	0.16	-1.5
2,760,319	-		ABI39_RS10330	0.16	+0.2
2,760,455	-		ABI39_RS10330	0.22	+0.3
2,760,596	+		ABI39_RS10330	0.29	+0.2
2,760,600	+		ABI39_RS10330	0.29	-0.0
2,760,696	-		ABI39_RS10330	0.34	+0.3
2,760,752	+		ABI39_RS10330	0.37	-1.3
2,760,752	+		ABI39_RS10330	0.37	-0.2
2,760,820	+		ABI39_RS10330	0.40	-0.5
2,760,922	-		ABI39_RS10330	0.45	-0.9
2,760,923	+		ABI39_RS10330	0.45	+0.3
2,761,255	+		ABI39_RS10330	0.62	-0.2
2,761,269	-		ABI39_RS10330	0.62	-0.4
2,761,355	+		ABI39_RS10330	0.67	-0.2
2,761,356	-		ABI39_RS10330	0.67	+0.4
2,761,356	-		ABI39_RS10330	0.67	+0.5
2,761,356	-		ABI39_RS10330	0.67	+0.1
2,761,425	+		ABI39_RS10330	0.70	+0.8
2,761,428	+		ABI39_RS10330	0.70	+0.4
2,761,429	-		ABI39_RS10330	0.70	-0.2
2,761,512	-		ABI39_RS10330	0.74	-1.1
2,761,804	+		ABI39_RS10330	0.89	+0.0
2,761,983	-				-0.3
2,761,998	-				+1.1
2,762,115	-		ABI39_RS10335	0.10	-0.4
2,762,159	-		ABI39_RS10335	0.19	-1.0
2,762,161	-		ABI39_RS10335	0.19	-0.1
2,762,175	-		ABI39_RS10335	0.22	-0.6
2,762,189	+		ABI39_RS10335	0.25	+0.2
2,762,301	+		ABI39_RS10335	0.47	+0.9
2,762,302	-		ABI39_RS10335	0.47	-0.0
2,762,305	-		ABI39_RS10335	0.48	-0.6
2,762,323	-		ABI39_RS10335	0.51	+0.6
2,762,323	-		ABI39_RS10335	0.51	-1.4
2,762,329	-		ABI39_RS10335	0.53	+0.7
2,762,329	-		ABI39_RS10335	0.53	+1.0
2,762,329	-		ABI39_RS10335	0.53	-0.1
2,762,417	+		ABI39_RS10335	0.70	+0.7
2,762,417	+		ABI39_RS10335	0.70	+0.3
2,762,417	+		ABI39_RS10335	0.70	-0.2
2,762,418	-		ABI39_RS10335	0.70	+0.3
2,762,418	-		ABI39_RS10335	0.70	+0.8
2,762,421	+		ABI39_RS10335	0.71	-0.3
2,762,435	+		ABI39_RS10335	0.74	+0.5
2,762,509	-		ABI39_RS10335	0.89	+0.3
2,762,653	-				+0.3
2,762,672	+				+0.8
2,762,748	-				+0.5
2,762,772	-				+0.2
2,762,884	+		ABI39_RS10340	0.18	-0.0
2,762,932	+		ABI39_RS10340	0.22	-0.2
2,762,960	-		ABI39_RS10340	0.24	+0.4