Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS09195

Experiment: beta-Cyclodextrin 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	beta-Cyclodextrin 2.5 mg/ml (C)
2,481,206	-		ABI39_RS09190	0.69	-0.1
2,481,355	-		ABI39_RS09190	0.76	+0.3
2,481,360	+		ABI39_RS09190	0.76	+1.1
2,481,361	-		ABI39_RS09190	0.76	-0.1
2,481,386	+		ABI39_RS09190	0.77	-0.6
2,481,391	+		ABI39_RS09190	0.77	-0.1
2,481,439	+		ABI39_RS09190	0.79	+0.1
2,481,440	-		ABI39_RS09190	0.80	+0.0
2,481,520	-		ABI39_RS09190	0.83	-1.9
2,481,630	+		ABI39_RS09190	0.88	+0.4
2,481,653	-		ABI39_RS09190	0.89	+0.1
2,481,838	+				+0.5
2,481,903	-				+0.1
2,481,948	-				+0.4
2,481,950	+				+0.3
2,481,966	-				+0.7
2,481,972	+				-0.3
2,481,972	+				-0.0
2,482,041	+				+0.5
2,482,053	+				-0.9
2,482,053	+				-1.2
2,482,058	-				+0.7
2,482,103	-				+1.7
2,482,365	+		ABI39_RS09195	0.12	-4.3
2,482,565	+		ABI39_RS09195	0.25	-1.9
2,482,613	+		ABI39_RS09195	0.28	-2.3
2,482,639	+		ABI39_RS09195	0.30	-3.2
2,482,639	+		ABI39_RS09195	0.30	-4.2
2,482,641	+		ABI39_RS09195	0.30	-3.9
2,483,168	+		ABI39_RS09195	0.65	-0.9
2,483,366	+		ABI39_RS09195	0.78	+0.3
2,483,747	+				+0.3