Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS04730

Experiment: beta-Cyclodextrin 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	beta-Cyclodextrin 2.5 mg/ml (C)
1,324,997	+		ABI39_RS04720	0.66	-0.7
1,324,998	-		ABI39_RS04720	0.66	-0.4
1,325,020	-		ABI39_RS04720	0.68	+0.7
1,325,021	+		ABI39_RS04720	0.68	-0.2
1,325,024	-		ABI39_RS04720	0.68	-0.2
1,325,254	-		ABI39_RS04720	0.86	+0.3
1,325,271	-		ABI39_RS04720	0.87	-0.6
1,325,394	+				+0.5
1,325,451	+				-1.7
1,325,451	+				+0.1
1,325,556	+		ABI39_RS04725	0.26	+0.6
1,325,612	+		ABI39_RS04725	0.40	-1.0
1,325,765	-		ABI39_RS04725	0.80	+0.6
1,325,765	-		ABI39_RS04725	0.80	+0.1
1,325,774	+		ABI39_RS04725	0.83	-0.2
1,325,775	-		ABI39_RS04725	0.83	+0.2
1,325,936	+				-1.2
1,326,195	-		ABI39_RS04730	0.52	-1.9
1,326,266	-		ABI39_RS04730	0.67	-2.4
1,326,808	+				+0.1
1,326,888	+				-0.1
1,326,891	+				+0.0
1,326,919	-				-0.5
1,326,920	+				-0.1
1,326,977	+				+0.8
1,326,978	-				+0.1
1,326,984	-				-0.3
1,327,019	-				-0.1
1,327,019	-				+1.0
1,327,043	+				-0.8
1,327,051	-				-0.7
1,327,054	+				-0.6
1,327,111	+		ABI39_RS04740	0.10	+0.1
1,327,112	-		ABI39_RS04740	0.10	+0.1
1,327,145	-		ABI39_RS04740	0.12	-0.3
1,327,149	+		ABI39_RS04740	0.12	-0.7
1,327,150	-		ABI39_RS04740	0.12	+0.6
1,327,152	-		ABI39_RS04740	0.12	+1.4
1,327,181	+		ABI39_RS04740	0.14	-0.6
1,327,201	+		ABI39_RS04740	0.15	-0.8
1,327,285	+		ABI39_RS04740	0.19	-1.6
1,327,400	-		ABI39_RS04740	0.25	-0.7
1,327,410	-		ABI39_RS04740	0.25	+0.1