Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS04400

Experiment: Dextrin from potato starch; autoclaved 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Dextrin from potato starch; autoclaved 2.5 mg/ml (C)
1,231,692	-				-0.3
1,231,709	+				+0.9
1,231,775	-				+0.4
1,231,790	+				-0.7
1,231,871	-				-0.3
1,231,982	-				-2.3
1,232,132	+		ABI39_RS04400	0.16	+0.1
1,232,215	+		ABI39_RS04400	0.19	+0.1
1,232,274	+		ABI39_RS04400	0.21	-1.2
1,232,277	-		ABI39_RS04400	0.21	-0.0
1,232,277	-		ABI39_RS04400	0.21	-0.2
1,232,510	-		ABI39_RS04400	0.30	-1.6
1,232,542	+		ABI39_RS04400	0.31	+0.2
1,232,579	+		ABI39_RS04400	0.32	-0.8
1,232,579	+		ABI39_RS04400	0.32	+0.0
1,232,637	+		ABI39_RS04400	0.34	-0.1
1,232,637	+		ABI39_RS04400	0.34	-0.9
1,232,660	+		ABI39_RS04400	0.35	-0.5
1,232,960	-		ABI39_RS04400	0.46	+0.2
1,232,960	-		ABI39_RS04400	0.46	-0.4
1,233,000	+		ABI39_RS04400	0.48	-0.3
1,233,034	+		ABI39_RS04400	0.49	-0.6
1,233,052	-		ABI39_RS04400	0.50	+0.2
1,233,138	+		ABI39_RS04400	0.53	-0.4
1,233,216	+		ABI39_RS04400	0.56	-0.9
1,233,475	+		ABI39_RS04400	0.66	-0.8
1,233,621	-		ABI39_RS04400	0.71	-1.2
1,233,627	-		ABI39_RS04400	0.71	-0.2
1,233,640	+		ABI39_RS04400	0.72	-0.9
1,233,642	+		ABI39_RS04400	0.72	+0.2
1,233,643	-		ABI39_RS04400	0.72	+0.4
1,233,661	+		ABI39_RS04400	0.73	-1.3
1,233,696	+		ABI39_RS04400	0.74	-0.5
1,233,777	+		ABI39_RS04400	0.77	-0.8
1,233,778	-		ABI39_RS04400	0.77	-1.2
1,233,789	+		ABI39_RS04400	0.77	-1.2
1,233,789	+		ABI39_RS04400	0.77	-1.3
1,233,886	+		ABI39_RS04400	0.81	-0.1
1,233,934	+		ABI39_RS04400	0.83	-1.3
1,233,935	-		ABI39_RS04400	0.83	-0.2
1,234,037	+		ABI39_RS04400	0.87	-0.9
1,234,037	+		ABI39_RS04400	0.87	-0.6
1,234,037	+		ABI39_RS04400	0.87	-0.5
1,234,037	+		ABI39_RS04400	0.87	-1.2
1,234,038	-		ABI39_RS04400	0.87	-0.0
1,234,038	-		ABI39_RS04400	0.87	-0.1
1,234,103	-		ABI39_RS04400	0.89	-0.1
1,234,159	+				-0.4
1,234,160	-				-0.6
1,234,392	+				+0.0
1,234,464	+				+0.5
1,234,612	+		ABI39_RS04405	0.11	+0.6
1,234,662	-		ABI39_RS04405	0.14	-0.3
1,235,128	+		ABI39_RS04405	0.49	-1.0
1,235,170	-		ABI39_RS04405	0.52	-1.8