Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS16870

Experiment: amylopectin from maize; autoclaved 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	amylopectin from maize; autoclaved 2.5 mg/ml (C)
4,278,810	+		ABI39_RS16865	0.72	+1.2
4,279,013	-		ABI39_RS16865	0.81	-0.4
4,279,013	-		ABI39_RS16865	0.81	+1.7
4,279,045	+		ABI39_RS16865	0.82	-0.1
4,279,218	+		ABI39_RS16865	0.89	-0.2
4,279,620	-				-1.4
4,279,692	+				-1.0
4,279,860	-		ABI39_RS16870	0.12	-1.0
4,279,918	-		ABI39_RS16870	0.16	-0.0
4,280,328	+		ABI39_RS16870	0.46	-1.0
4,280,395	+		ABI39_RS16870	0.51	-1.0
4,280,479	+		ABI39_RS16870	0.57	-1.6
4,280,600	+		ABI39_RS16870	0.66	-2.4
4,280,600	+		ABI39_RS16870	0.66	-0.0
4,280,679	+		ABI39_RS16870	0.72	-2.0
4,280,890	+		ABI39_RS16870	0.88	-1.6
4,280,896	+		ABI39_RS16870	0.88	-1.0
4,280,935	+				-1.0
4,281,012	+				-0.6
4,281,050	+				+0.5
4,281,054	+				+0.6
4,281,301	-		ABI39_RS16875	0.18	-1.0
4,281,367	-		ABI39_RS16875	0.24	-1.6
4,281,396	-		ABI39_RS16875	0.26	-0.0
4,281,406	-		ABI39_RS16875	0.27	-1.0
4,281,590	+		ABI39_RS16875	0.42	-0.0
4,281,596	+		ABI39_RS16875	0.43	-0.0
4,281,715	+		ABI39_RS16875	0.52	-1.0