Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS14860

Experiment: amylopectin from maize; autoclaved 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	amylopectin from maize; autoclaved 2.5 mg/ml (C)
3,857,579	+		ABI39_RS14855	0.65	-0.0
3,857,579	+		ABI39_RS14855	0.65	+1.6
3,857,714	+		ABI39_RS14855	0.71	+1.8
3,857,715	-		ABI39_RS14855	0.71	+0.3
3,857,880	-		ABI39_RS14855	0.78	-0.6
3,857,943	-		ABI39_RS14855	0.81	+0.4
3,857,974	+		ABI39_RS14855	0.82	+0.6
3,857,976	+		ABI39_RS14855	0.82	+0.9
3,857,976	+		ABI39_RS14855	0.82	-1.0
3,857,976	+		ABI39_RS14855	0.82	+0.5
3,858,182	-				+0.3
3,858,230	+				+0.7
3,858,321	+				+1.3
3,859,239	-		ABI39_RS14865	0.12	+0.0
3,859,243	-		ABI39_RS14865	0.12	+0.9
3,859,335	+		ABI39_RS14865	0.19	-0.7
3,859,336	-		ABI39_RS14865	0.19	-1.1
3,859,407	-		ABI39_RS14865	0.24	+0.8
3,859,559	+		ABI39_RS14865	0.34	-0.4
3,859,722	+		ABI39_RS14865	0.45	+0.2
3,859,723	-		ABI39_RS14865	0.45	-0.1
3,859,778	-		ABI39_RS14865	0.49	+0.1
3,859,907	+		ABI39_RS14865	0.57	-0.5
3,859,908	-		ABI39_RS14865	0.57	-2.1
3,859,951	-		ABI39_RS14865	0.60	-0.9
3,860,037	+		ABI39_RS14865	0.66	-0.2
3,860,038	-		ABI39_RS14865	0.66	-0.4