Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS09845

Experiment: amylopectin from maize; autoclaved 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	amylopectin from maize; autoclaved 2.5 mg/ml (C)
2,641,994	-				+1.3
2,642,850	-				-0.6
2,643,323	-		ABI39_RS09845	0.70	-1.2
2,643,327	-		ABI39_RS09845	0.71	-3.5
2,643,393	-		ABI39_RS09845	0.80	-0.2
2,643,402	-		ABI39_RS09845	0.81	-1.8
2,643,402	-		ABI39_RS09845	0.81	-1.8
2,643,402	-		ABI39_RS09845	0.81	-1.2
2,643,443	-		ABI39_RS09845	0.87	-2.8
2,643,443	-		ABI39_RS09845	0.87	-1.2
2,643,532	-				-1.8
2,643,532	-				-1.8
2,643,534	-				-2.2
2,643,534	-				-3.8
2,643,556	-				-0.4
2,643,590	-				+1.1
2,643,628	+				-1.0
2,643,861	+		ABI39_RS09850	0.21	-1.8
2,643,895	+		ABI39_RS09850	0.26	-3.5
2,643,944	-		ABI39_RS09850	0.33	-1.2
2,643,982	+		ABI39_RS09850	0.39	-1.9
2,643,987	+		ABI39_RS09850	0.40	-1.8
2,644,043	+		ABI39_RS09850	0.48	-1.2
2,644,098	+		ABI39_RS09850	0.56	-0.2
2,644,169	+		ABI39_RS09850	0.66	-2.8
2,644,231	+		ABI39_RS09850	0.75	-1.2
2,644,267	+		ABI39_RS09850	0.81	-3.0
2,644,272	+		ABI39_RS09850	0.81	-0.2
2,644,356	+				+0.8
2,644,367	+				-1.2
2,644,370	-				-0.2
2,644,380	+				-2.4
2,644,393	-				-1.2
2,644,419	+				-0.7
2,644,420	-				+0.8
2,644,470	-				-1.2
2,644,516	-				-1.2