Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS09755

Experiment: amylopectin from maize; autoclaved 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	amylopectin from maize; autoclaved 2.5 mg/ml (C)
2,619,239	-				-1.7
2,619,453	-				-1.7
2,621,477	-		ABI39_RS09760	0.27	+0.6
2,621,477	-		ABI39_RS09760	0.27	+1.0
2,621,477	-		ABI39_RS09760	0.27	-1.4
2,621,562	-		ABI39_RS09760	0.51	-0.4
2,621,588	-		ABI39_RS09760	0.58	+0.6
2,621,628	-		ABI39_RS09760	0.69	-2.4
2,621,743	-				-0.9
2,621,763	-				+2.2
2,621,889	-				-2.8
2,622,072	-		ABI39_RS09765	0.18	-0.8
2,622,135	-				-1.4
2,622,163	+				+0.3
2,622,344	+				-0.9
2,622,357	+				-0.7