Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS00030

Experiment: amylopectin from maize; autoclaved 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	amylopectin from maize; autoclaved 2.5 mg/ml (C)
8,031	-				+2.0
8,059	+				-0.5
8,089	+				+1.1
8,111	-				-0.2
8,171	+				+0.6
8,171	+				-0.3
8,172	-				-2.1
8,244	-				+0.2
8,257	-				-0.2
8,724	+				+0.1
8,813	-				-0.1
8,813	-				-0.5
8,816	-				-0.7
8,875	+				+1.1
8,876	-				+0.8
8,944	+				-0.4
8,954	-				-0.1
9,023	+		ABI39_RS00030	0.16	-0.8
9,064	+		ABI39_RS00030	0.21	+0.2
9,075	-		ABI39_RS00030	0.22	+1.2
9,181	-		ABI39_RS00030	0.34	-1.7
9,225	+		ABI39_RS00030	0.39	+0.3
9,228	-		ABI39_RS00030	0.39	-1.3
9,228	-		ABI39_RS00030	0.39	-2.2
9,334	-		ABI39_RS00030	0.51	-0.1
9,350	+		ABI39_RS00030	0.53	-1.4
9,351	-		ABI39_RS00030	0.53	-2.3
9,372	+		ABI39_RS00030	0.56	+0.1
9,492	-		ABI39_RS00030	0.69	-0.7
9,492	-		ABI39_RS00030	0.69	+1.7
9,607	-		ABI39_RS00030	0.82	-1.6
9,612	-		ABI39_RS00030	0.83	+0.7
9,621	+		ABI39_RS00030	0.84	+0.2
9,676	-				-2.1
9,677	+				-1.0
9,677	+				-1.2
9,678	-				+0.4
9,723	+				-0.4
9,821	+				-0.5
9,824	-				+0.6