Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS17730

Experiment: amylopectin from maize; autoclaved 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	amylopectin from maize; autoclaved 2.5 mg/ml (C)
4,475,830	+				+1.4
4,475,831	-				-0.4
4,475,900	-				-1.2
4,475,950	+				+0.1
4,476,022	+				-1.9
4,476,322	+		ABI39_RS17710	0.88	+1.1
4,476,453	-				+0.5
4,476,681	-				-0.6
4,476,872	-				-1.9
4,476,874	-				-2.0
4,476,876	-				-1.0
4,476,889	+				-1.9
4,476,937	+				-4.0
4,476,968	-		ABI39_RS17730	0.12	-2.1
4,477,027	+		ABI39_RS17730	0.17	-1.9
4,477,029	+		ABI39_RS17730	0.17	-2.8
4,477,065	+		ABI39_RS17730	0.20	-2.7
4,477,334	-		ABI39_RS17730	0.43	-1.8
4,477,430	+		ABI39_RS17730	0.52	-2.8
4,477,445	-		ABI39_RS17730	0.53	-1.2
4,477,458	+		ABI39_RS17730	0.54	-1.7
4,477,626	-		ABI39_RS17730	0.68	-1.2
4,477,651	+		ABI39_RS17730	0.71	-2.2
4,477,780	-		ABI39_RS17730	0.82	-1.5
4,477,797	+		ABI39_RS17730	0.83	-1.8
4,477,807	+		ABI39_RS17730	0.84	-2.2
4,477,960	-				-1.1
4,478,127	-				+0.7
4,478,232	-				+0.1