Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS15610

Experiment: amylopectin from maize; autoclaved 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	amylopectin from maize; autoclaved 2.5 mg/ml (C)
4,038,323	+		ABI39_RS15610	0.90	-2.5
4,038,325	+				-3.8
4,038,431	+				-2.2
4,038,431	+				-1.4
4,038,501	-		ABI39_RS15615	0.24	-0.2
4,038,581	-		ABI39_RS15615	0.56	-2.4
4,038,644	+		ABI39_RS15615	0.81	-1.9
4,038,644	+		ABI39_RS15615	0.81	-3.3
4,038,798	-				-1.8
4,038,930	-				+0.9
4,038,977	-				-0.5
4,039,158	-				+0.2
4,039,266	+				+0.9
4,039,268	+				+0.7
4,039,361	+				-0.1
4,039,363	+				-0.4
4,039,363	+				+0.2
4,039,371	-				+0.7
4,039,403	+				+0.7
4,039,424	+				-1.5