Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS10350

Experiment: amylopectin from maize; autoclaved 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	amylopectin from maize; autoclaved 2.5 mg/ml (C)
2,766,167	-		ABI39_RS10345	0.73	+1.0
2,766,194	+		ABI39_RS10345	0.74	+0.3
2,766,407	+		ABI39_RS10345	0.81	+0.1
2,766,512	+		ABI39_RS10345	0.84	+0.3
2,766,532	+		ABI39_RS10345	0.85	+1.6
2,766,533	-		ABI39_RS10345	0.85	+0.2
2,766,656	-		ABI39_RS10345	0.89	-0.7
2,766,737	+				+1.2
2,766,844	+				-0.7
2,767,000	-				+1.4
2,767,095	-				+0.9
2,767,269	+		ABI39_RS10350	0.23	+1.2
2,767,343	+		ABI39_RS10350	0.29	+0.4
2,767,623	+		ABI39_RS10350	0.53	+0.1
2,767,651	-		ABI39_RS10350	0.55	+0.8
2,767,651	-		ABI39_RS10350	0.55	+0.1
2,767,989	+		ABI39_RS10350	0.84	+0.9
2,767,990	-		ABI39_RS10350	0.84	+1.0
2,768,087	+				+0.1
2,768,094	-				+0.3
2,768,109	+				+1.3
2,768,110	-				+0.1
2,768,388	+				-1.7
2,768,390	+				+2.5
2,768,390	+				+1.2
2,768,452	+				-0.9
2,768,640	+				+0.7
2,768,842	-		ABI39_RS10355	0.13	+0.3
2,768,885	-		ABI39_RS10355	0.16	+0.1
2,768,885	-		ABI39_RS10355	0.16	+0.5
2,768,885	-		ABI39_RS10355	0.16	+0.0
2,768,922	-		ABI39_RS10355	0.18	-1.7
2,768,924	-		ABI39_RS10355	0.18	+1.0
2,768,990	+		ABI39_RS10355	0.23	-3.5
2,769,014	+		ABI39_RS10355	0.24	+0.4
2,769,015	-		ABI39_RS10355	0.24	-1.6
2,769,126	-		ABI39_RS10355	0.31	+0.6