Experiment: Uracil 0.8921 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS13900 and A4249_RS13905 are separated by 87 nucleotides A4249_RS13905 and A4249_RS13910 are separated by 87 nucleotides A4249_RS13910 and A4249_RS16680 are separated by 581 nucleotides A4249_RS16680 and A4249_RS13920 are separated by 88 nucleotides
A4249_RS13900: A4249_RS13900 - 23S ribosomal RNA, at 2,804,168 to 2,806,941
_RS13900
A4249_RS13905: A4249_RS13905 - 5S ribosomal RNA, at 2,807,029 to 2,807,143
_RS13905
A4249_RS13910: A4249_RS13910 - tRNA-Met, at 2,807,231 to 2,807,307
_RS13910
A4249_RS16680: A4249_RS16680 - hypothetical protein, at 2,807,889 to 2,808,050
_RS16680
A4249_RS13920: A4249_RS13920 - TonB-dependent receptor, at 2,808,139 to 2,810,172
_RS13920
Position (kb)
2807
2808
2809 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2807.403 kb on + strand at 2807.403 kb on + strand at 2807.417 kb on + strand at 2807.417 kb on + strand at 2807.418 kb on - strand at 2807.418 kb on - strand at 2807.445 kb on - strand at 2807.490 kb on + strand at 2807.490 kb on + strand at 2807.491 kb on - strand at 2807.491 kb on - strand at 2807.589 kb on + strand at 2807.589 kb on + strand at 2807.644 kb on + strand at 2807.645 kb on - strand at 2807.645 kb on - strand at 2807.645 kb on - strand at 2807.664 kb on + strand at 2807.664 kb on + strand at 2807.664 kb on + strand at 2807.665 kb on - strand at 2807.786 kb on + strand at 2807.786 kb on + strand at 2807.786 kb on + strand at 2807.786 kb on + strand at 2807.786 kb on + strand at 2807.787 kb on - strand at 2807.787 kb on - strand at 2807.787 kb on - strand at 2807.787 kb on - strand at 2807.787 kb on - strand at 2807.787 kb on - strand at 2807.787 kb on - strand at 2807.787 kb on - strand at 2807.787 kb on - strand at 2807.787 kb on - strand at 2807.787 kb on - strand at 2807.787 kb on - strand at 2807.787 kb on - strand at 2807.787 kb on - strand at 2807.817 kb on + strand at 2807.817 kb on + strand at 2807.817 kb on + strand at 2807.818 kb on - strand at 2807.818 kb on - strand at 2807.818 kb on - strand at 2807.818 kb on - strand at 2807.858 kb on - strand at 2807.858 kb on - strand at 2807.891 kb on - strand at 2807.956 kb on - strand, within A4249_RS16680 at 2808.050 kb on + strand at 2808.050 kb on + strand at 2808.051 kb on - strand at 2808.150 kb on - strand at 2808.314 kb on + strand at 2808.314 kb on + strand at 2808.314 kb on + strand at 2808.314 kb on + strand at 2808.314 kb on + strand at 2808.314 kb on + strand at 2808.314 kb on + strand at 2808.314 kb on + strand at 2808.314 kb on + strand at 2808.314 kb on + strand at 2808.315 kb on - strand at 2808.315 kb on - strand at 2808.315 kb on - strand at 2808.315 kb on - strand at 2808.315 kb on - strand at 2808.315 kb on - strand at 2808.432 kb on - strand, within A4249_RS13920 at 2808.479 kb on + strand, within A4249_RS13920 at 2808.479 kb on + strand, within A4249_RS13920 at 2808.480 kb on - strand, within A4249_RS13920 at 2808.480 kb on - strand, within A4249_RS13920 at 2808.480 kb on - strand, within A4249_RS13920 at 2808.480 kb on - strand, within A4249_RS13920 at 2808.480 kb on - strand, within A4249_RS13920 at 2808.480 kb on - strand, within A4249_RS13920 at 2808.480 kb on - strand, within A4249_RS13920 at 2808.480 kb on - strand, within A4249_RS13920 at 2808.480 kb on - strand, within A4249_RS13920 at 2808.533 kb on + strand, within A4249_RS13920 at 2808.533 kb on + strand, within A4249_RS13920 at 2808.534 kb on - strand, within A4249_RS13920 at 2808.557 kb on + strand, within A4249_RS13920 at 2808.557 kb on + strand, within A4249_RS13920 at 2808.557 kb on + strand, within A4249_RS13920 at 2808.557 kb on + strand, within A4249_RS13920 at 2808.557 kb on + strand, within A4249_RS13920 at 2808.557 kb on + strand, within A4249_RS13920 at 2808.557 kb on + strand, within A4249_RS13920 at 2808.558 kb on - strand, within A4249_RS13920 at 2808.558 kb on - strand, within A4249_RS13920 at 2808.558 kb on - strand, within A4249_RS13920 at 2808.558 kb on - strand, within A4249_RS13920 at 2808.558 kb on - strand, within A4249_RS13920 at 2808.558 kb on - strand, within A4249_RS13920 at 2808.587 kb on + strand, within A4249_RS13920 at 2808.588 kb on - strand, within A4249_RS13920 at 2808.588 kb on - strand, within A4249_RS13920 at 2808.588 kb on - strand, within A4249_RS13920 at 2808.588 kb on - strand, within A4249_RS13920 at 2808.588 kb on - strand, within A4249_RS13920 at 2808.588 kb on - strand, within A4249_RS13920 at 2808.620 kb on + strand, within A4249_RS13920 at 2808.620 kb on + strand, within A4249_RS13920 at 2808.620 kb on + strand, within A4249_RS13920 at 2808.620 kb on + strand, within A4249_RS13920 at 2808.620 kb on + strand, within A4249_RS13920 at 2808.621 kb on - strand, within A4249_RS13920 at 2808.621 kb on - strand, within A4249_RS13920 at 2808.621 kb on - strand, within A4249_RS13920 at 2808.660 kb on + strand, within A4249_RS13920 at 2808.660 kb on + strand, within A4249_RS13920 at 2808.661 kb on - strand, within A4249_RS13920 at 2808.661 kb on - strand, within A4249_RS13920 at 2808.662 kb on + strand, within A4249_RS13920 at 2808.662 kb on + strand, within A4249_RS13920 at 2808.662 kb on + strand, within A4249_RS13920 at 2808.662 kb on + strand, within A4249_RS13920 at 2808.662 kb on + strand, within A4249_RS13920 at 2808.662 kb on + strand, within A4249_RS13920 at 2808.663 kb on - strand, within A4249_RS13920 at 2808.663 kb on - strand, within A4249_RS13920 at 2808.663 kb on - strand, within A4249_RS13920 at 2808.663 kb on - strand, within A4249_RS13920 at 2808.663 kb on - strand, within A4249_RS13920 at 2808.663 kb on - strand, within A4249_RS13920 at 2808.663 kb on - strand, within A4249_RS13920 at 2808.674 kb on + strand, within A4249_RS13920 at 2808.674 kb on + strand, within A4249_RS13920 at 2808.674 kb on + strand, within A4249_RS13920 at 2808.674 kb on + strand, within A4249_RS13920 at 2808.674 kb on + strand, within A4249_RS13920 at 2808.675 kb on - strand, within A4249_RS13920 at 2808.675 kb on - strand, within A4249_RS13920 at 2808.675 kb on - strand, within A4249_RS13920 at 2808.675 kb on - strand, within A4249_RS13920 at 2808.675 kb on - strand, within A4249_RS13920 at 2808.675 kb on - strand, within A4249_RS13920 at 2808.710 kb on + strand, within A4249_RS13920 at 2808.710 kb on + strand, within A4249_RS13920 at 2808.711 kb on - strand, within A4249_RS13920 at 2808.711 kb on - strand, within A4249_RS13920 at 2808.845 kb on - strand, within A4249_RS13920 at 2808.850 kb on - strand, within A4249_RS13920 at 2808.974 kb on + strand, within A4249_RS13920 at 2808.974 kb on + strand, within A4249_RS13920 at 2808.974 kb on + strand, within A4249_RS13920 at 2809.026 kb on + strand, within A4249_RS13920 at 2809.026 kb on + strand, within A4249_RS13920 at 2809.026 kb on + strand, within A4249_RS13920 at 2809.026 kb on + strand, within A4249_RS13920 at 2809.027 kb on - strand, within A4249_RS13920 at 2809.027 kb on - strand, within A4249_RS13920 at 2809.027 kb on - strand, within A4249_RS13920 at 2809.027 kb on - strand, within A4249_RS13920 at 2809.027 kb on - strand, within A4249_RS13920 at 2809.028 kb on + strand, within A4249_RS13920 at 2809.028 kb on + strand, within A4249_RS13920 at 2809.028 kb on + strand, within A4249_RS13920 at 2809.028 kb on + strand, within A4249_RS13920 at 2809.029 kb on - strand, within A4249_RS13920 at 2809.029 kb on - strand, within A4249_RS13920 at 2809.029 kb on - strand, within A4249_RS13920 at 2809.029 kb on - strand, within A4249_RS13920 at 2809.029 kb on - strand, within A4249_RS13920 at 2809.029 kb on - strand, within A4249_RS13920 at 2809.029 kb on - strand, within A4249_RS13920 at 2809.029 kb on - strand, within A4249_RS13920
Per-strain Table
Position Strand Gene LocusTag Fraction Uracil 0.8921 mM (C) remove 2,807,403 + +0.2 2,807,403 + -0.0 2,807,417 + -0.6 2,807,417 + +0.2 2,807,418 - +0.4 2,807,418 - +0.1 2,807,445 - -0.1 2,807,490 + -0.2 2,807,490 + +0.5 2,807,491 - -0.3 2,807,491 - -0.2 2,807,589 + +0.2 2,807,589 + +1.0 2,807,644 + +0.5 2,807,645 - +0.0 2,807,645 - +0.4 2,807,645 - -0.2 2,807,664 + -0.6 2,807,664 + +0.1 2,807,664 + +0.4 2,807,665 - +0.2 2,807,786 + +0.2 2,807,786 + +1.4 2,807,786 + -0.2 2,807,786 + -0.1 2,807,786 + +0.1 2,807,787 - +0.0 2,807,787 - -0.2 2,807,787 - +0.7 2,807,787 - -0.1 2,807,787 - +0.1 2,807,787 - -0.1 2,807,787 - +0.8 2,807,787 - -0.6 2,807,787 - -0.3 2,807,787 - +0.3 2,807,787 - -0.2 2,807,787 - +0.4 2,807,787 - +0.2 2,807,787 - +0.7 2,807,817 + -0.1 2,807,817 + +0.8 2,807,817 + +0.1 2,807,818 - +0.2 2,807,818 - +0.2 2,807,818 - +0.4 2,807,818 - +0.9 2,807,858 - -0.0 2,807,858 - +0.3 2,807,891 - -0.3 2,807,956 - A4249_RS16680 0.41 +0.1 2,808,050 + -0.6 2,808,050 + -0.4 2,808,051 - +0.2 2,808,150 - +0.1 2,808,314 + +0.4 2,808,314 + -0.7 2,808,314 + +0.1 2,808,314 + +0.4 2,808,314 + +0.2 2,808,314 + -0.5 2,808,314 + -0.2 2,808,314 + +0.4 2,808,314 + +0.0 2,808,314 + +0.1 2,808,315 - +0.0 2,808,315 - -0.5 2,808,315 - -0.1 2,808,315 - -0.7 2,808,315 - -0.1 2,808,315 - -0.5 2,808,432 - A4249_RS13920 0.14 -1.8 2,808,479 + A4249_RS13920 0.17 +0.5 2,808,479 + A4249_RS13920 0.17 -0.6 2,808,480 - A4249_RS13920 0.17 +0.7 2,808,480 - A4249_RS13920 0.17 +0.3 2,808,480 - A4249_RS13920 0.17 -1.1 2,808,480 - A4249_RS13920 0.17 +0.4 2,808,480 - A4249_RS13920 0.17 +0.1 2,808,480 - A4249_RS13920 0.17 -1.2 2,808,480 - A4249_RS13920 0.17 +0.8 2,808,480 - A4249_RS13920 0.17 +0.1 2,808,480 - A4249_RS13920 0.17 +0.1 2,808,533 + A4249_RS13920 0.19 +0.2 2,808,533 + A4249_RS13920 0.19 +0.2 2,808,534 - A4249_RS13920 0.19 +1.0 2,808,557 + A4249_RS13920 0.21 -1.0 2,808,557 + A4249_RS13920 0.21 -0.3 2,808,557 + A4249_RS13920 0.21 -0.8 2,808,557 + A4249_RS13920 0.21 +0.2 2,808,557 + A4249_RS13920 0.21 +1.2 2,808,557 + A4249_RS13920 0.21 +0.1 2,808,557 + A4249_RS13920 0.21 +0.9 2,808,558 - A4249_RS13920 0.21 +0.2 2,808,558 - A4249_RS13920 0.21 +0.1 2,808,558 - A4249_RS13920 0.21 +0.4 2,808,558 - A4249_RS13920 0.21 +1.0 2,808,558 - A4249_RS13920 0.21 -0.7 2,808,558 - A4249_RS13920 0.21 +0.5 2,808,587 + A4249_RS13920 0.22 -0.2 2,808,588 - A4249_RS13920 0.22 +0.2 2,808,588 - A4249_RS13920 0.22 +1.8 2,808,588 - A4249_RS13920 0.22 -0.2 2,808,588 - A4249_RS13920 0.22 -0.0 2,808,588 - A4249_RS13920 0.22 -0.0 2,808,588 - A4249_RS13920 0.22 +0.8 2,808,620 + A4249_RS13920 0.24 -1.1 2,808,620 + A4249_RS13920 0.24 -0.4 2,808,620 + A4249_RS13920 0.24 +0.1 2,808,620 + A4249_RS13920 0.24 +0.4 2,808,620 + A4249_RS13920 0.24 -0.3 2,808,621 - A4249_RS13920 0.24 +0.1 2,808,621 - A4249_RS13920 0.24 +0.1 2,808,621 - A4249_RS13920 0.24 +1.5 2,808,660 + A4249_RS13920 0.26 +0.4 2,808,660 + A4249_RS13920 0.26 -0.4 2,808,661 - A4249_RS13920 0.26 +1.5 2,808,661 - A4249_RS13920 0.26 +1.2 2,808,662 + A4249_RS13920 0.26 -1.1 2,808,662 + A4249_RS13920 0.26 +1.0 2,808,662 + A4249_RS13920 0.26 +0.1 2,808,662 + A4249_RS13920 0.26 +1.0 2,808,662 + A4249_RS13920 0.26 -0.9 2,808,662 + A4249_RS13920 0.26 -0.2 2,808,663 - A4249_RS13920 0.26 +0.0 2,808,663 - A4249_RS13920 0.26 +0.5 2,808,663 - A4249_RS13920 0.26 +0.4 2,808,663 - A4249_RS13920 0.26 +0.3 2,808,663 - A4249_RS13920 0.26 -0.5 2,808,663 - A4249_RS13920 0.26 -0.1 2,808,663 - A4249_RS13920 0.26 +0.3 2,808,674 + A4249_RS13920 0.26 +1.4 2,808,674 + A4249_RS13920 0.26 -0.4 2,808,674 + A4249_RS13920 0.26 +0.3 2,808,674 + A4249_RS13920 0.26 +0.2 2,808,674 + A4249_RS13920 0.26 +1.4 2,808,675 - A4249_RS13920 0.26 +0.3 2,808,675 - A4249_RS13920 0.26 -0.3 2,808,675 - A4249_RS13920 0.26 +1.1 2,808,675 - A4249_RS13920 0.26 +0.7 2,808,675 - A4249_RS13920 0.26 -0.0 2,808,675 - A4249_RS13920 0.26 +0.3 2,808,710 + A4249_RS13920 0.28 +0.3 2,808,710 + A4249_RS13920 0.28 -0.4 2,808,711 - A4249_RS13920 0.28 +0.3 2,808,711 - A4249_RS13920 0.28 +0.8 2,808,845 - A4249_RS13920 0.35 +0.3 2,808,850 - A4249_RS13920 0.35 +0.4 2,808,974 + A4249_RS13920 0.41 +1.0 2,808,974 + A4249_RS13920 0.41 +0.2 2,808,974 + A4249_RS13920 0.41 -0.0 2,809,026 + A4249_RS13920 0.44 +0.5 2,809,026 + A4249_RS13920 0.44 -1.1 2,809,026 + A4249_RS13920 0.44 +0.6 2,809,026 + A4249_RS13920 0.44 -0.7 2,809,027 - A4249_RS13920 0.44 +0.7 2,809,027 - A4249_RS13920 0.44 -0.4 2,809,027 - A4249_RS13920 0.44 +0.5 2,809,027 - A4249_RS13920 0.44 -0.2 2,809,027 - A4249_RS13920 0.44 -0.2 2,809,028 + A4249_RS13920 0.44 -0.4 2,809,028 + A4249_RS13920 0.44 +0.0 2,809,028 + A4249_RS13920 0.44 -0.6 2,809,028 + A4249_RS13920 0.44 +0.2 2,809,029 - A4249_RS13920 0.44 -0.4 2,809,029 - A4249_RS13920 0.44 -0.1 2,809,029 - A4249_RS13920 0.44 -0.1 2,809,029 - A4249_RS13920 0.44 +0.1 2,809,029 - A4249_RS13920 0.44 +0.2 2,809,029 - A4249_RS13920 0.44 -0.1 2,809,029 - A4249_RS13920 0.44 -0.1 2,809,029 - A4249_RS13920 0.44 +0.2
Or see this region's nucleotide sequence