Experiment: Uracil 0.8921 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS14020 and A4249_RS14025 are separated by 36 nucleotides A4249_RS14025 and A4249_RS14030 are separated by 36 nucleotides A4249_RS14030 and A4249_RS14035 are separated by 73 nucleotides A4249_RS14035 and A4249_RS14040 are separated by 75 nucleotides
A4249_RS14020: A4249_RS14020 - acyltransferase, at 2,829,157 to 2,830,311
_RS14020
A4249_RS14025: A4249_RS14025 - CHAP domain-containing protein, at 2,830,348 to 2,830,878
_RS14025
A4249_RS14030: A4249_RS14030 - tryptophan 2,3-dioxygenase, at 2,830,915 to 2,831,712
_RS14030
A4249_RS14035: A4249_RS14035 - PA2169 family four-helix-bundle protein, at 2,831,786 to 2,832,271
_RS14035
A4249_RS14040: A4249_RS14040 - 50S ribosomal protein L19, at 2,832,347 to 2,832,769
_RS14040
Position (kb)
2830
2831
2832 Strain fitness (log2 ratio)
-1
0
1
2 at 2830.004 kb on - strand, within A4249_RS14020 at 2830.004 kb on - strand, within A4249_RS14020 at 2830.021 kb on + strand, within A4249_RS14020 at 2830.021 kb on + strand, within A4249_RS14020 at 2830.021 kb on + strand, within A4249_RS14020 at 2830.022 kb on - strand, within A4249_RS14020 at 2830.022 kb on - strand, within A4249_RS14020 at 2830.030 kb on + strand, within A4249_RS14020 at 2830.030 kb on + strand, within A4249_RS14020 at 2830.030 kb on + strand, within A4249_RS14020 at 2830.030 kb on + strand, within A4249_RS14020 at 2830.031 kb on - strand, within A4249_RS14020 at 2830.031 kb on - strand, within A4249_RS14020 at 2830.031 kb on - strand, within A4249_RS14020 at 2830.031 kb on - strand, within A4249_RS14020 at 2830.031 kb on - strand, within A4249_RS14020 at 2830.031 kb on - strand, within A4249_RS14020 at 2830.031 kb on - strand, within A4249_RS14020 at 2830.031 kb on - strand, within A4249_RS14020 at 2830.032 kb on + strand, within A4249_RS14020 at 2830.032 kb on + strand, within A4249_RS14020 at 2830.032 kb on + strand, within A4249_RS14020 at 2830.032 kb on + strand, within A4249_RS14020 at 2830.033 kb on - strand, within A4249_RS14020 at 2830.033 kb on - strand, within A4249_RS14020 at 2830.033 kb on - strand, within A4249_RS14020 at 2830.033 kb on - strand, within A4249_RS14020 at 2830.165 kb on + strand, within A4249_RS14020 at 2830.165 kb on + strand, within A4249_RS14020 at 2830.165 kb on + strand, within A4249_RS14020 at 2830.166 kb on - strand, within A4249_RS14020 at 2830.166 kb on - strand, within A4249_RS14020 at 2830.166 kb on - strand, within A4249_RS14020 at 2830.166 kb on - strand, within A4249_RS14020 at 2830.192 kb on - strand, within A4249_RS14020 at 2830.254 kb on + strand at 2830.254 kb on + strand at 2830.254 kb on + strand at 2830.255 kb on - strand at 2830.255 kb on - strand at 2830.255 kb on - strand at 2830.255 kb on - strand at 2830.255 kb on - strand at 2830.750 kb on + strand, within A4249_RS14025 at 2830.784 kb on - strand, within A4249_RS14025 at 2830.793 kb on - strand, within A4249_RS14025 at 2830.805 kb on - strand, within A4249_RS14025 at 2830.806 kb on + strand, within A4249_RS14025 at 2830.876 kb on + strand at 2830.876 kb on + strand at 2830.876 kb on + strand at 2830.876 kb on + strand at 2830.907 kb on - strand at 2830.939 kb on + strand at 2830.939 kb on + strand at 2830.939 kb on + strand at 2830.939 kb on + strand at 2830.940 kb on - strand at 2830.940 kb on - strand at 2830.940 kb on - strand at 2830.948 kb on + strand at 2830.949 kb on - strand at 2830.949 kb on - strand at 2831.085 kb on + strand, within A4249_RS14030 at 2831.085 kb on + strand, within A4249_RS14030 at 2831.085 kb on + strand, within A4249_RS14030 at 2831.085 kb on + strand, within A4249_RS14030 at 2831.085 kb on + strand, within A4249_RS14030 at 2831.085 kb on + strand, within A4249_RS14030 at 2831.086 kb on - strand, within A4249_RS14030 at 2831.086 kb on - strand, within A4249_RS14030 at 2831.086 kb on - strand, within A4249_RS14030 at 2831.086 kb on - strand, within A4249_RS14030 at 2831.086 kb on - strand, within A4249_RS14030 at 2831.086 kb on - strand, within A4249_RS14030 at 2831.116 kb on + strand, within A4249_RS14030 at 2831.200 kb on + strand, within A4249_RS14030 at 2831.200 kb on + strand, within A4249_RS14030 at 2831.200 kb on + strand, within A4249_RS14030 at 2831.201 kb on - strand, within A4249_RS14030 at 2831.449 kb on + strand, within A4249_RS14030 at 2831.449 kb on + strand, within A4249_RS14030 at 2831.449 kb on + strand, within A4249_RS14030 at 2831.450 kb on - strand, within A4249_RS14030 at 2831.450 kb on - strand, within A4249_RS14030 at 2831.450 kb on - strand, within A4249_RS14030 at 2831.491 kb on + strand, within A4249_RS14030 at 2831.491 kb on + strand, within A4249_RS14030 at 2831.492 kb on - strand, within A4249_RS14030 at 2831.522 kb on - strand, within A4249_RS14030 at 2831.540 kb on + strand, within A4249_RS14030 at 2831.541 kb on - strand, within A4249_RS14030 at 2831.541 kb on - strand, within A4249_RS14030 at 2831.648 kb on - strand at 2831.648 kb on - strand at 2831.783 kb on + strand at 2831.783 kb on + strand at 2831.783 kb on + strand at 2831.783 kb on + strand at 2831.783 kb on + strand at 2831.784 kb on - strand at 2831.784 kb on - strand at 2831.784 kb on - strand at 2831.784 kb on - strand at 2831.784 kb on - strand at 2831.897 kb on + strand, within A4249_RS14035 at 2831.898 kb on - strand, within A4249_RS14035 at 2832.113 kb on + strand, within A4249_RS14035 at 2832.113 kb on + strand, within A4249_RS14035 at 2832.113 kb on + strand, within A4249_RS14035 at 2832.113 kb on + strand, within A4249_RS14035 at 2832.114 kb on - strand, within A4249_RS14035 at 2832.114 kb on - strand, within A4249_RS14035 at 2832.133 kb on + strand, within A4249_RS14035 at 2832.134 kb on - strand, within A4249_RS14035 at 2832.176 kb on + strand, within A4249_RS14035 at 2832.176 kb on + strand, within A4249_RS14035 at 2832.176 kb on + strand, within A4249_RS14035 at 2832.177 kb on - strand, within A4249_RS14035 at 2832.177 kb on - strand, within A4249_RS14035 at 2832.177 kb on - strand, within A4249_RS14035 at 2832.269 kb on + strand at 2832.269 kb on + strand at 2832.269 kb on + strand at 2832.269 kb on + strand at 2832.270 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Uracil 0.8921 mM (C) remove 2,830,004 - A4249_RS14020 0.73 +0.9 2,830,004 - A4249_RS14020 0.73 +0.5 2,830,021 + A4249_RS14020 0.75 +0.3 2,830,021 + A4249_RS14020 0.75 +0.1 2,830,021 + A4249_RS14020 0.75 +0.2 2,830,022 - A4249_RS14020 0.75 +0.2 2,830,022 - A4249_RS14020 0.75 -0.2 2,830,030 + A4249_RS14020 0.76 -1.3 2,830,030 + A4249_RS14020 0.76 +0.7 2,830,030 + A4249_RS14020 0.76 +1.2 2,830,030 + A4249_RS14020 0.76 +0.1 2,830,031 - A4249_RS14020 0.76 +0.1 2,830,031 - A4249_RS14020 0.76 +0.1 2,830,031 - A4249_RS14020 0.76 +0.1 2,830,031 - A4249_RS14020 0.76 +0.3 2,830,031 - A4249_RS14020 0.76 -0.1 2,830,031 - A4249_RS14020 0.76 -0.1 2,830,031 - A4249_RS14020 0.76 +0.6 2,830,031 - A4249_RS14020 0.76 -0.0 2,830,032 + A4249_RS14020 0.76 +0.1 2,830,032 + A4249_RS14020 0.76 -0.3 2,830,032 + A4249_RS14020 0.76 +0.5 2,830,032 + A4249_RS14020 0.76 +0.3 2,830,033 - A4249_RS14020 0.76 +0.2 2,830,033 - A4249_RS14020 0.76 +0.7 2,830,033 - A4249_RS14020 0.76 -1.7 2,830,033 - A4249_RS14020 0.76 -0.3 2,830,165 + A4249_RS14020 0.87 +0.9 2,830,165 + A4249_RS14020 0.87 +1.0 2,830,165 + A4249_RS14020 0.87 +1.1 2,830,166 - A4249_RS14020 0.87 +1.6 2,830,166 - A4249_RS14020 0.87 -0.1 2,830,166 - A4249_RS14020 0.87 +0.2 2,830,166 - A4249_RS14020 0.87 -0.6 2,830,192 - A4249_RS14020 0.90 +0.4 2,830,254 + +0.3 2,830,254 + +0.4 2,830,254 + -0.3 2,830,255 - -0.7 2,830,255 - +0.4 2,830,255 - +0.4 2,830,255 - +0.3 2,830,255 - +0.3 2,830,750 + A4249_RS14025 0.76 +0.4 2,830,784 - A4249_RS14025 0.82 +0.9 2,830,793 - A4249_RS14025 0.84 +0.7 2,830,805 - A4249_RS14025 0.86 +0.3 2,830,806 + A4249_RS14025 0.86 -0.2 2,830,876 + +0.2 2,830,876 + +0.0 2,830,876 + +0.9 2,830,876 + +0.2 2,830,907 - -0.2 2,830,939 + +0.2 2,830,939 + +0.3 2,830,939 + -0.1 2,830,939 + +0.2 2,830,940 - -1.1 2,830,940 - -0.1 2,830,940 - -0.1 2,830,948 + -0.6 2,830,949 - -0.9 2,830,949 - -0.5 2,831,085 + A4249_RS14030 0.21 -0.2 2,831,085 + A4249_RS14030 0.21 -0.7 2,831,085 + A4249_RS14030 0.21 +0.6 2,831,085 + A4249_RS14030 0.21 +0.8 2,831,085 + A4249_RS14030 0.21 +0.1 2,831,085 + A4249_RS14030 0.21 -0.2 2,831,086 - A4249_RS14030 0.21 +0.4 2,831,086 - A4249_RS14030 0.21 -0.4 2,831,086 - A4249_RS14030 0.21 +1.0 2,831,086 - A4249_RS14030 0.21 +0.3 2,831,086 - A4249_RS14030 0.21 -0.3 2,831,086 - A4249_RS14030 0.21 +0.0 2,831,116 + A4249_RS14030 0.25 +0.2 2,831,200 + A4249_RS14030 0.36 -0.2 2,831,200 + A4249_RS14030 0.36 +0.6 2,831,200 + A4249_RS14030 0.36 +0.4 2,831,201 - A4249_RS14030 0.36 +0.7 2,831,449 + A4249_RS14030 0.67 -0.0 2,831,449 + A4249_RS14030 0.67 +0.9 2,831,449 + A4249_RS14030 0.67 +2.3 2,831,450 - A4249_RS14030 0.67 +0.6 2,831,450 - A4249_RS14030 0.67 +0.9 2,831,450 - A4249_RS14030 0.67 -0.4 2,831,491 + A4249_RS14030 0.72 -0.1 2,831,491 + A4249_RS14030 0.72 +0.6 2,831,492 - A4249_RS14030 0.72 +0.8 2,831,522 - A4249_RS14030 0.76 +0.7 2,831,540 + A4249_RS14030 0.78 +0.6 2,831,541 - A4249_RS14030 0.78 -0.1 2,831,541 - A4249_RS14030 0.78 +0.3 2,831,648 - +0.8 2,831,648 - +0.2 2,831,783 + -0.2 2,831,783 + -0.1 2,831,783 + +0.7 2,831,783 + -0.8 2,831,783 + +0.7 2,831,784 - -0.6 2,831,784 - +0.0 2,831,784 - -0.2 2,831,784 - +0.6 2,831,784 - -0.3 2,831,897 + A4249_RS14035 0.23 -0.9 2,831,898 - A4249_RS14035 0.23 +0.9 2,832,113 + A4249_RS14035 0.67 -0.3 2,832,113 + A4249_RS14035 0.67 +0.4 2,832,113 + A4249_RS14035 0.67 +0.7 2,832,113 + A4249_RS14035 0.67 -0.1 2,832,114 - A4249_RS14035 0.67 +1.4 2,832,114 - A4249_RS14035 0.67 +1.6 2,832,133 + A4249_RS14035 0.71 +0.6 2,832,134 - A4249_RS14035 0.72 -0.1 2,832,176 + A4249_RS14035 0.80 -0.3 2,832,176 + A4249_RS14035 0.80 -0.1 2,832,176 + A4249_RS14035 0.80 +0.8 2,832,177 - A4249_RS14035 0.80 +1.1 2,832,177 - A4249_RS14035 0.80 -0.1 2,832,177 - A4249_RS14035 0.80 +0.0 2,832,269 + -0.1 2,832,269 + +0.7 2,832,269 + -0.1 2,832,269 + -0.0 2,832,270 - -0.1
Or see this region's nucleotide sequence