Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS13165

Experiment: Uracil 0.8921 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS13155 and A4249_RS13160 overlap by 4 nucleotidesA4249_RS13160 and A4249_RS13165 are separated by 47 nucleotidesA4249_RS13165 and A4249_RS13170 are separated by 47 nucleotides A4249_RS13155: A4249_RS13155 - heparinase II/III family protein, at 2,647,986 to 2,649,833 _RS13155 A4249_RS13160: A4249_RS13160 - ribulose-phosphate 3-epimerase, at 2,649,830 to 2,650,495 _RS13160 A4249_RS13165: A4249_RS13165 - RsmB/NOP family class I SAM-dependent RNA methyltransferase, at 2,650,543 to 2,651,880 _RS13165 A4249_RS13170: A4249_RS13170 - potassium transporter Kup, at 2,651,928 to 2,653,904 _RS13170 Position (kb) 2650 2651 2652Strain fitness (log2 ratio) -2 -1 0 1at 2649.643 kb on + strand, within A4249_RS13155at 2649.643 kb on + strand, within A4249_RS13155at 2649.644 kb on - strand, within A4249_RS13155at 2650.763 kb on + strand, within A4249_RS13165at 2650.763 kb on + strand, within A4249_RS13165at 2650.763 kb on + strand, within A4249_RS13165at 2650.763 kb on + strand, within A4249_RS13165at 2650.763 kb on + strand, within A4249_RS13165at 2650.763 kb on + strand, within A4249_RS13165at 2650.764 kb on - strand, within A4249_RS13165at 2650.764 kb on - strand, within A4249_RS13165at 2650.764 kb on - strand, within A4249_RS13165at 2650.764 kb on - strand, within A4249_RS13165at 2650.764 kb on - strand, within A4249_RS13165at 2650.764 kb on - strand, within A4249_RS13165at 2651.372 kb on + strand, within A4249_RS13165at 2651.372 kb on + strand, within A4249_RS13165at 2651.372 kb on + strand, within A4249_RS13165at 2651.373 kb on - strand, within A4249_RS13165at 2651.373 kb on - strand, within A4249_RS13165at 2651.373 kb on - strand, within A4249_RS13165at 2651.483 kb on + strand, within A4249_RS13165at 2651.483 kb on + strand, within A4249_RS13165at 2651.484 kb on - strand, within A4249_RS13165at 2651.484 kb on - strand, within A4249_RS13165at 2651.484 kb on - strand, within A4249_RS13165at 2651.932 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Uracil 0.8921 mM (C)
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2,649,643 + A4249_RS13155 0.90 +0.5
2,649,643 + A4249_RS13155 0.90 +0.0
2,649,644 - A4249_RS13155 0.90 -0.4
2,650,763 + A4249_RS13165 0.16 -0.4
2,650,763 + A4249_RS13165 0.16 -0.2
2,650,763 + A4249_RS13165 0.16 +1.4
2,650,763 + A4249_RS13165 0.16 -0.8
2,650,763 + A4249_RS13165 0.16 -0.1
2,650,763 + A4249_RS13165 0.16 +0.3
2,650,764 - A4249_RS13165 0.17 -2.2
2,650,764 - A4249_RS13165 0.17 +0.4
2,650,764 - A4249_RS13165 0.17 -0.4
2,650,764 - A4249_RS13165 0.17 +0.0
2,650,764 - A4249_RS13165 0.17 +0.3
2,650,764 - A4249_RS13165 0.17 -0.7
2,651,372 + A4249_RS13165 0.62 +0.4
2,651,372 + A4249_RS13165 0.62 +0.2
2,651,372 + A4249_RS13165 0.62 +1.1
2,651,373 - A4249_RS13165 0.62 +0.6
2,651,373 - A4249_RS13165 0.62 -1.4
2,651,373 - A4249_RS13165 0.62 -0.5
2,651,483 + A4249_RS13165 0.70 +1.1
2,651,483 + A4249_RS13165 0.70 +0.5
2,651,484 - A4249_RS13165 0.70 +0.9
2,651,484 - A4249_RS13165 0.70 -0.2
2,651,484 - A4249_RS13165 0.70 -1.1
2,651,932 - -0.4

Or see this region's nucleotide sequence