Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS12980

Experiment: Uracil 0.8921 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Uracil 0.8921 mM (C)
2,603,184	+				-0.4
2,603,246	+				+0.4
2,603,252	+				+0.9
2,603,253	-				-1.2
2,603,266	+				+0.6
2,603,267	-				+0.2
2,603,267	-				+0.2
2,603,267	-				-0.6
2,603,267	-				+0.0
2,603,267	-				+0.1
2,603,497	+		A4249_RS12975	0.50	-0.7
2,603,497	+		A4249_RS12975	0.50	-0.2
2,603,497	+		A4249_RS12975	0.50	-1.3
2,603,498	-		A4249_RS12975	0.50	+0.5
2,603,804	-				-3.9
2,603,807	+				+0.4
2,603,808	-				+0.5
2,603,808	-				-0.1
2,603,854	-				-0.5
2,603,883	+				-0.2
2,603,883	+				-0.1
2,603,884	-				+0.6
2,603,905	+				+0.5
2,603,906	-				-0.2
2,603,906	-				+0.5
2,603,922	-				-0.2
2,603,922	-				+1.1
2,603,922	-				-0.7
2,603,963	+				-1.4
2,603,964	-				-0.6
2,603,987	+				-0.8
2,603,988	-				-1.6
2,603,988	-				-0.2
2,604,014	+				-0.8
2,604,014	+				-0.4
2,604,014	+				-1.4
2,604,014	+				-1.5
2,604,015	-				-0.6
2,604,015	-				-0.3
2,604,015	-				-0.5
2,604,015	-				-0.5
2,604,015	-				-0.5
2,604,034	+				-0.4
2,604,081	+				-0.6
2,604,103	+				-0.1
2,604,103	+				-1.0
2,604,103	+				+0.0
2,604,103	+				-1.5
2,604,103	+				-1.4
2,604,103	+				-1.1
2,604,103	+				-0.6
2,604,103	+				-0.3
2,604,103	+				-1.0
2,604,103	+				-0.8
2,604,104	-				+0.1
2,604,104	-				+0.1
2,604,104	-				-1.4
2,604,104	-				-0.4
2,604,104	-				-0.7
2,604,104	-				-0.2
2,604,104	-				-0.5
2,604,104	-				-1.0
2,604,104	-				-0.5
2,604,104	-				-0.5
2,604,105	-				+0.1
2,604,295	+		A4249_RS12980	0.25	-1.1
2,604,295	+		A4249_RS12980	0.25	-0.9
2,604,295	+		A4249_RS12980	0.25	-0.5
2,604,295	+		A4249_RS12980	0.25	-0.6
2,604,296	-		A4249_RS12980	0.25	-0.2
2,604,296	-		A4249_RS12980	0.25	-0.4
2,604,296	-		A4249_RS12980	0.25	-1.8
2,604,296	-		A4249_RS12980	0.25	-1.5
2,604,296	-		A4249_RS12980	0.25	-1.1
2,604,296	-		A4249_RS12980	0.25	-1.0
2,604,424	+		A4249_RS12980	0.38	-0.7
2,604,424	+		A4249_RS12980	0.38	-0.5
2,604,424	+		A4249_RS12980	0.38	+0.8
2,604,424	+		A4249_RS12980	0.38	-1.0
2,604,424	+		A4249_RS12980	0.38	-1.5
2,604,425	-		A4249_RS12980	0.38	-0.9
2,604,425	-		A4249_RS12980	0.38	-0.8
2,604,425	-		A4249_RS12980	0.38	+0.4
2,604,425	-		A4249_RS12980	0.38	-0.7
2,604,425	-		A4249_RS12980	0.38	-1.1
2,604,425	-		A4249_RS12980	0.38	-0.9
2,604,425	-		A4249_RS12980	0.38	-0.9
2,604,425	-		A4249_RS12980	0.38	-0.1
2,604,425	-		A4249_RS12980	0.38	-0.5
2,604,425	-		A4249_RS12980	0.38	-0.2
2,604,448	+		A4249_RS12980	0.40	-0.1
2,604,448	+		A4249_RS12980	0.40	-1.0
2,604,448	+		A4249_RS12980	0.40	-0.3
2,604,448	+		A4249_RS12980	0.40	-0.6
2,604,448	+		A4249_RS12980	0.40	-1.0
2,604,448	+		A4249_RS12980	0.40	-1.1
2,604,448	+		A4249_RS12980	0.40	-0.1
2,604,448	+		A4249_RS12980	0.40	-0.7
2,604,448	+		A4249_RS12980	0.40	-0.6
2,604,448	+		A4249_RS12980	0.40	+0.3
2,604,449	-		A4249_RS12980	0.40	-0.3
2,604,449	-		A4249_RS12980	0.40	-0.5
2,604,449	-		A4249_RS12980	0.40	-1.2
2,604,449	-		A4249_RS12980	0.40	-0.9
2,604,449	-		A4249_RS12980	0.40	-1.2
2,604,449	-		A4249_RS12980	0.40	+1.2
2,604,449	-		A4249_RS12980	0.40	-0.6
2,604,449	-		A4249_RS12980	0.40	-1.4
2,604,449	-		A4249_RS12980	0.40	+0.2
2,604,449	-		A4249_RS12980	0.40	-1.2
2,604,449	-		A4249_RS12980	0.40	-0.6
2,604,449	-		A4249_RS12980	0.40	+0.5
2,604,449	-		A4249_RS12980	0.40	-0.4
2,604,468	+		A4249_RS12980	0.42	-0.1
2,604,493	+		A4249_RS12980	0.45	-1.0
2,604,493	+		A4249_RS12980	0.45	-1.6
2,604,494	-		A4249_RS12980	0.45	-0.8
2,604,494	-		A4249_RS12980	0.45	+0.1
2,604,508	+		A4249_RS12980	0.46	-0.8
2,604,515	+		A4249_RS12980	0.47	-0.2
2,604,515	+		A4249_RS12980	0.47	-0.9
2,604,550	+		A4249_RS12980	0.51	-0.8
2,604,550	+		A4249_RS12980	0.51	-1.2
2,604,736	+		A4249_RS12980	0.70	+0.1
2,604,736	+		A4249_RS12980	0.70	-1.1
2,604,736	+		A4249_RS12980	0.70	-0.2
2,604,736	+		A4249_RS12980	0.70	+0.9
2,604,736	+		A4249_RS12980	0.70	-0.8
2,604,736	+		A4249_RS12980	0.70	-0.5
2,604,736	+		A4249_RS12980	0.70	+0.0
2,604,736	+		A4249_RS12980	0.70	-0.6
2,604,736	+		A4249_RS12980	0.70	+0.0
2,604,736	+		A4249_RS12980	0.70	-0.7
2,604,736	+		A4249_RS12980	0.70	-0.6
2,604,736	+		A4249_RS12980	0.70	-0.3
2,604,736	+		A4249_RS12980	0.70	-1.3
2,604,736	+		A4249_RS12980	0.70	-0.5
2,604,737	-		A4249_RS12980	0.70	-0.6
2,604,737	-		A4249_RS12980	0.70	-0.9
2,604,737	-		A4249_RS12980	0.70	-0.6
2,604,737	-		A4249_RS12980	0.70	-1.4
2,604,737	-		A4249_RS12980	0.70	-0.9
2,604,737	-		A4249_RS12980	0.70	-0.7
2,604,737	-		A4249_RS12980	0.70	-2.2
2,604,737	-		A4249_RS12980	0.70	-1.6
2,604,737	-		A4249_RS12980	0.70	-0.6
2,604,737	-		A4249_RS12980	0.70	+0.0
2,604,737	-		A4249_RS12980	0.70	-1.1
2,604,737	-		A4249_RS12980	0.70	-0.4
2,604,737	-		A4249_RS12980	0.70	-0.3
2,604,737	-		A4249_RS12980	0.70	-0.8
2,604,737	-		A4249_RS12980	0.70	+0.0
2,604,737	-		A4249_RS12980	0.70	-0.4
2,604,737	-		A4249_RS12980	0.70	-0.3
2,604,737	-		A4249_RS12980	0.70	-0.0
2,604,737	-		A4249_RS12980	0.70	-0.7
2,604,737	-		A4249_RS12980	0.70	-1.0
2,604,784	+		A4249_RS12980	0.74	-0.2
2,604,784	+		A4249_RS12980	0.74	-0.7
2,604,784	+		A4249_RS12980	0.74	-1.0
2,604,784	+		A4249_RS12980	0.74	-0.8
2,604,784	+		A4249_RS12980	0.74	-0.8
2,604,785	-		A4249_RS12980	0.74	-0.1
2,604,785	-		A4249_RS12980	0.74	-0.2
2,604,785	-		A4249_RS12980	0.74	-1.2
2,604,785	-		A4249_RS12980	0.74	+0.0
2,604,785	-		A4249_RS12980	0.74	+0.5
2,604,785	-		A4249_RS12980	0.74	-0.6
2,604,868	+		A4249_RS12980	0.83	-0.8
2,604,868	+		A4249_RS12980	0.83	-0.6
2,604,868	+		A4249_RS12980	0.83	+1.4
2,604,868	+		A4249_RS12980	0.83	-1.5
2,604,868	+		A4249_RS12980	0.83	+1.1
2,604,868	+		A4249_RS12980	0.83	+0.0
2,604,868	+		A4249_RS12980	0.83	-1.1
2,604,868	+		A4249_RS12980	0.83	-1.7
2,604,868	+		A4249_RS12980	0.83	-0.9
2,604,868	+		A4249_RS12980	0.83	-1.8
2,604,868	+		A4249_RS12980	0.83	-1.6
2,604,868	+		A4249_RS12980	0.83	-0.7
2,604,868	+		A4249_RS12980	0.83	-1.0
2,604,868	+		A4249_RS12980	0.83	-0.7
2,604,868	+		A4249_RS12980	0.83	-0.2
2,604,868	+		A4249_RS12980	0.83	-0.7
2,604,868	+		A4249_RS12980	0.83	-1.5
2,604,868	+		A4249_RS12980	0.83	+0.5
2,604,869	-		A4249_RS12980	0.83	-0.8
2,604,869	-		A4249_RS12980	0.83	-0.6
2,604,869	-		A4249_RS12980	0.83	-0.7
2,604,869	-		A4249_RS12980	0.83	-0.8
2,604,869	-		A4249_RS12980	0.83	-0.2
2,604,869	-		A4249_RS12980	0.83	-0.7
2,604,869	-		A4249_RS12980	0.83	-1.4
2,604,869	-		A4249_RS12980	0.83	-0.3
2,604,869	-		A4249_RS12980	0.83	-0.2
2,604,869	-		A4249_RS12980	0.83	-1.0
2,604,869	-		A4249_RS12980	0.83	-0.5
2,604,869	-		A4249_RS12980	0.83	-1.1
2,604,869	-		A4249_RS12980	0.83	-1.0
2,605,020	+				+0.4
2,605,020	+				+0.2
2,605,020	+				-0.8
2,605,020	+				-0.7
2,605,020	+				-0.0
2,605,020	+				+0.2
2,605,021	-				-0.2
2,605,021	-				+0.4
2,605,021	-				+0.4
2,605,021	-				-1.0
2,605,064	+				+0.1
2,605,064	+				-0.5
2,605,064	+				+0.2
2,605,064	+				-1.6
2,605,065	-				-0.2
2,605,212	+		A4249_RS12985	0.14	-0.3
2,605,213	-		A4249_RS12985	0.14	-0.4
2,605,437	+		A4249_RS12985	0.36	+0.2
2,605,463	+		A4249_RS12985	0.39	+0.3
2,605,463	+		A4249_RS12985	0.39	-0.4
2,605,463	+		A4249_RS12985	0.39	-0.8
2,605,463	+		A4249_RS12985	0.39	-1.0
2,605,464	-		A4249_RS12985	0.39	-0.9
2,605,464	-		A4249_RS12985	0.39	-0.0
2,605,464	-		A4249_RS12985	0.39	-0.4
2,605,464	-		A4249_RS12985	0.39	-1.2
2,605,464	-		A4249_RS12985	0.39	+0.0
2,605,464	-		A4249_RS12985	0.39	-0.8
2,605,464	-		A4249_RS12985	0.39	+1.1
2,605,465	+		A4249_RS12985	0.39	-0.1
2,605,465	+		A4249_RS12985	0.39	-0.1
2,605,466	-		A4249_RS12985	0.39	-0.2
2,605,466	-		A4249_RS12985	0.39	+0.3
2,605,528	+		A4249_RS12985	0.46	+0.1
2,605,528	+		A4249_RS12985	0.46	+1.1
2,605,528	+		A4249_RS12985	0.46	-0.5
2,605,529	-		A4249_RS12985	0.46	+1.1
2,605,529	-		A4249_RS12985	0.46	+1.2
2,605,593	+		A4249_RS12985	0.52	-0.4
2,605,599	-		A4249_RS12985	0.53	+1.1
2,605,617	+		A4249_RS12985	0.55	-1.1
2,605,617	+		A4249_RS12985	0.55	-0.1
2,605,617	+		A4249_RS12985	0.55	+0.2
2,605,617	+		A4249_RS12985	0.55	+0.1
2,605,661	+		A4249_RS12985	0.59	-0.6
2,605,662	-		A4249_RS12985	0.59	+0.8
2,605,662	-		A4249_RS12985	0.59	-0.2
2,605,757	+		A4249_RS12985	0.69	+0.3
2,605,757	+		A4249_RS12985	0.69	+0.0
2,605,757	+		A4249_RS12985	0.69	+0.1
2,605,757	+		A4249_RS12985	0.69	+0.3
2,605,757	+		A4249_RS12985	0.69	-0.4
2,605,757	+		A4249_RS12985	0.69	-0.5
2,605,757	+		A4249_RS12985	0.69	+0.2
2,605,757	+		A4249_RS12985	0.69	-0.2
2,605,757	+		A4249_RS12985	0.69	-0.2
2,605,757	+		A4249_RS12985	0.69	-0.6
2,605,757	+		A4249_RS12985	0.69	-0.0
2,605,757	+		A4249_RS12985	0.69	-0.2
2,605,765	+		A4249_RS12985	0.69	+0.1
2,605,765	+		A4249_RS12985	0.69	+0.4
2,605,765	+		A4249_RS12985	0.69	+1.1
2,605,781	+		A4249_RS12985	0.71	+0.5
2,605,781	+		A4249_RS12985	0.71	-1.4
2,605,781	+		A4249_RS12985	0.71	-0.2
2,605,781	+		A4249_RS12985	0.71	+1.4
2,605,781	+		A4249_RS12985	0.71	-1.2
2,605,782	-		A4249_RS12985	0.71	+0.4
2,605,813	+		A4249_RS12985	0.74	+0.3
2,605,813	+		A4249_RS12985	0.74	-0.2
2,605,813	+		A4249_RS12985	0.74	+0.2
2,605,813	+		A4249_RS12985	0.74	+0.0
2,605,813	+		A4249_RS12985	0.74	-0.2
2,605,853	+		A4249_RS12985	0.78	-0.1
2,605,853	+		A4249_RS12985	0.78	-0.5
2,605,853	+		A4249_RS12985	0.78	-0.9
2,606,026	+				-0.4
2,606,026	+				+0.1