Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS12375

Experiment: Uracil 0.8921 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS12370 and A4249_RS12375 are separated by 119 nucleotidesA4249_RS12375 and A4249_RS12380 are separated by 3 nucleotidesA4249_RS12380 and A4249_RS12385 are separated by 54 nucleotides A4249_RS12370: A4249_RS12370 - hypothetical protein, at 2,481,955 to 2,483,163 _RS12370 A4249_RS12375: A4249_RS12375 - hypothetical protein, at 2,483,283 to 2,483,534 _RS12375 A4249_RS12380: A4249_RS12380 - molybdopterin-synthase adenylyltransferase MoeB, at 2,483,538 to 2,484,272 _RS12380 A4249_RS12385: A4249_RS12385 - BLUF domain-containing protein, at 2,484,327 to 2,484,698 _RS12385 Position (kb) 2483 2484Strain fitness (log2 ratio) -1 0 1at 2482.564 kb on - strand, within A4249_RS12370at 2482.585 kb on - strand, within A4249_RS12370at 2482.658 kb on + strand, within A4249_RS12370at 2482.658 kb on + strand, within A4249_RS12370at 2482.694 kb on - strand, within A4249_RS12370at 2483.292 kb on + strandat 2483.292 kb on + strandat 2483.292 kb on + strandat 2483.293 kb on - strandat 2483.293 kb on - strandat 2483.293 kb on - strandat 2483.295 kb on + strandat 2483.295 kb on + strandat 2483.295 kb on + strandat 2483.295 kb on + strandat 2483.295 kb on + strandat 2483.296 kb on - strandat 2483.296 kb on - strandat 2483.296 kb on - strandat 2483.296 kb on - strandat 2483.296 kb on - strandat 2483.421 kb on + strand, within A4249_RS12375at 2483.421 kb on + strand, within A4249_RS12375at 2483.422 kb on - strand, within A4249_RS12375at 2483.422 kb on - strand, within A4249_RS12375at 2483.422 kb on - strand, within A4249_RS12375at 2483.422 kb on - strand, within A4249_RS12375at 2483.427 kb on + strand, within A4249_RS12375at 2483.428 kb on - strand, within A4249_RS12375at 2484.278 kb on + strandat 2484.278 kb on + strandat 2484.278 kb on + strandat 2484.278 kb on + strandat 2484.278 kb on + strandat 2484.279 kb on - strandat 2484.282 kb on + strandat 2484.282 kb on + strandat 2484.282 kb on + strandat 2484.282 kb on + strandat 2484.283 kb on - strandat 2484.503 kb on + strand, within A4249_RS12385

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Per-strain Table

Position Strand Gene LocusTag Fraction Uracil 0.8921 mM (C)
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2,482,564 - A4249_RS12370 0.50 -0.5
2,482,585 - A4249_RS12370 0.52 +0.2
2,482,658 + A4249_RS12370 0.58 -0.0
2,482,658 + A4249_RS12370 0.58 +1.0
2,482,694 - A4249_RS12370 0.61 +0.2
2,483,292 + -0.3
2,483,292 + -0.1
2,483,292 + +0.3
2,483,293 - -0.2
2,483,293 - -0.2
2,483,293 - -0.5
2,483,295 + -0.1
2,483,295 + +0.5
2,483,295 + -0.7
2,483,295 + -0.2
2,483,295 + +0.0
2,483,296 - +0.2
2,483,296 - -0.2
2,483,296 - +0.7
2,483,296 - +0.7
2,483,296 - -0.3
2,483,421 + A4249_RS12375 0.55 -0.2
2,483,421 + A4249_RS12375 0.55 +0.3
2,483,422 - A4249_RS12375 0.55 -0.5
2,483,422 - A4249_RS12375 0.55 -0.7
2,483,422 - A4249_RS12375 0.55 -1.2
2,483,422 - A4249_RS12375 0.55 -0.3
2,483,427 + A4249_RS12375 0.57 +1.5
2,483,428 - A4249_RS12375 0.58 +0.4
2,484,278 + -1.6
2,484,278 + -0.5
2,484,278 + +0.8
2,484,278 + +0.2
2,484,278 + -1.2
2,484,279 - -0.7
2,484,282 + +0.2
2,484,282 + +0.8
2,484,282 + -0.6
2,484,282 + +0.9
2,484,283 - +0.1
2,484,503 + A4249_RS12385 0.47 -0.5

Or see this region's nucleotide sequence